CircRNA Information

General Information
circRNA Basic Information
CircID chr22:29698128|29698333
Strand -
CircType exon
Host Gene ENSG00000186575.16;
Algorism CIRI2;
Sequence CTCAGCCACAGCAGTCCCCCCAACCTGTGTTGTCCACCCTATTATTCATGTACCTGCCAGGCCCTGCTAGATAGCACCCCGTGGCATTACATAACACTTCATGAGTGGCTGTGTCTTGTAATTTTGGGGACAGGTTTCTCTCTTTCCCTCTCTTTTTTTTGTCAAAAGCCCAGAGACTGACAACCAGCTGCAGTGTCTAAGTGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:29698128|29698333 hsa-miR-223-5p 0 0 1
chr22:29698128|29698333 hsa-miR-223-3p 0 0 1
chr22:29698128|29698333 hsa-miR-380-5p 0 0 1
chr22:29698128|29698333 hsa-miR-380-3p 0 0 1
chr22:29698128|29698333 hsa-miR-326 0 0 1
chr22:29698128|29698333 hsa-miR-573 0 1 1
chr22:29698128|29698333 hsa-miR-593-5p 0 0 1
chr22:29698128|29698333 hsa-miR-593-3p 0 0 1
chr22:29698128|29698333 hsa-miR-612 0 0 1
chr22:29698128|29698333 hsa-miR-622 0 0 1
chr22:29698128|29698333 hsa-miR-649 0 0 1
chr22:29698128|29698333 hsa-miR-1301-5p 0 0 1
chr22:29698128|29698333 hsa-miR-1301-3p 0 0 1
chr22:29698128|29698333 hsa-miR-1275 1 0 1
chr22:29698128|29698333 hsa-miR-1288-5p 0 0 1
chr22:29698128|29698333 hsa-miR-1288-3p 0 0 1
chr22:29698128|29698333 hsa-miR-1184 0 1 1
chr22:29698128|29698333 hsa-miR-1207-3p 0 0 1
chr22:29698128|29698333 hsa-miR-1207-5p 1 0 1
chr22:29698128|29698333 hsa-miR-342-5p 0 1 1
chr22:29698128|29698333 hsa-miR-330-5p 0 1 1
chr22:29698128|29698333 hsa-miR-509-3-5p 0 1 1
chr22:29698128|29698333 hsa-miR-509-5p 0 0 1
chr22:29698128|29698333 hsa-miR-1285 0 0 1
chr22:29698128|29698333 hsa-miR-514 0 0 1
chr22:29698128|29698333 hsa-miR-453 0 0 1
chr22:29698128|29698333 hsa-miR-365 0 0 1
chr22:29698128|29698333 hsa-miR-602 1 0 0
chr22:29698128|29698333 hsa-miR-608 1 0 0
chr22:29698128|29698333 hsa-miR-1182 1 1 0
chr22:29698128|29698333 hsa-miR-1268a 1 0 0
chr22:29698128|29698333 hsa-miR-2861 1 1 0
chr22:29698128|29698333 hsa-miR-3138 1 1 0
chr22:29698128|29698333 hsa-miR-3153 0 1 0
chr22:29698128|29698333 hsa-miR-3665 1 0 0
chr22:29698128|29698333 hsa-miR-3918 1 1 0
chr22:29698128|29698333 hsa-miR-1268b 1 0 0
chr22:29698128|29698333 hsa-miR-4428 0 1 0
chr22:29698128|29698333 hsa-miR-4498 1 0 0
chr22:29698128|29698333 hsa-miR-4505 1 0 0
chr22:29698128|29698333 hsa-miR-4507 1 0 0
chr22:29698128|29698333 hsa-miR-1587 1 0 0
chr22:29698128|29698333 hsa-miR-4651 1 0 0
chr22:29698128|29698333 hsa-miR-4739 1 1 0
chr22:29698128|29698333 hsa-miR-4741 1 0 0
chr22:29698128|29698333 hsa-miR-5047 0 1 0
chr22:29698128|29698333 hsa-miR-5572 1 0 0
chr22:29698128|29698333 hsa-miR-5681a 1 0 0
chr22:29698128|29698333 hsa-miR-6085 1 0 0
chr22:29698128|29698333 hsa-miR-6132 1 1 0
chr22:29698128|29698333 hsa-miR-6745 1 1 0
chr22:29698128|29698333 hsa-miR-8052 0 1 0
chr22:29698128|29698333 hsa-miR-12121 1 1 0
chr22:29698128|29698333 hsa-miR-135a-3p 1 0 0
chr22:29698128|29698333 hsa-miR-92a-1-5p 1 1 0
chr22:29698128|29698333 hsa-miR-6734-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6854-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6728-5p 1 0 0
chr22:29698128|29698333 hsa-miR-8071 1 0 0
chr22:29698128|29698333 hsa-miR-3192-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6873-5p 0 1 0
chr22:29698128|29698333 hsa-miR-7847-3p 1 0 0
chr22:29698128|29698333 hsa-miR-7154-3p 1 0 0
chr22:29698128|29698333 hsa-miR-6890-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6721-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6732-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6782-5p 1 0 0
chr22:29698128|29698333 hsa-miR-7109-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4640-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6753-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4691-3p 0 1 0
chr22:29698128|29698333 hsa-miR-296-3p 1 0 0
chr22:29698128|29698333 hsa-miR-4690-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6749-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4446-3p 1 0 0
chr22:29698128|29698333 hsa-miR-149-3p 1 0 0
chr22:29698128|29698333 hsa-miR-5584-5p 0 1 0
chr22:29698128|29698333 hsa-miR-6895-5p 1 0 0
chr22:29698128|29698333 hsa-miR-7160-3p 1 0 0
chr22:29698128|29698333 hsa-miR-423-5p 1 0 0
chr22:29698128|29698333 hsa-miR-7846-3p 1 0 0
chr22:29698128|29698333 hsa-miR-6504-3p 1 1 0
chr22:29698128|29698333 hsa-miR-744-5p 1 0 0
chr22:29698128|29698333 hsa-miR-1296-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6868-5p 0 1 0
chr22:29698128|29698333 hsa-miR-4717-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4763-3p 1 0 0
chr22:29698128|29698333 hsa-miR-6812-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6893-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6775-5p 1 0 0
chr22:29698128|29698333 hsa-miR-5001-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6737-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6756-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6803-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6813-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6819-5p 1 0 0
chr22:29698128|29698333 hsa-miR-7107-5p 1 0 0
chr22:29698128|29698333 hsa-miR-1249-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6722-3p 1 0 0
chr22:29698128|29698333 hsa-miR-6751-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6780a-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6808-5p 1 0 0
chr22:29698128|29698333 hsa-miR-3620-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4728-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6836-5p 1 1 0
chr22:29698128|29698333 hsa-miR-10396a-5p 1 0 0
chr22:29698128|29698333 hsa-miR-1909-3p 1 0 0
chr22:29698128|29698333 hsa-miR-328-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4745-3p 1 0 0
chr22:29698128|29698333 hsa-miR-4749-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6795-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6846-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6848-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6887-5p 1 1 0
chr22:29698128|29698333 hsa-miR-3199 0 1 0
chr22:29698128|29698333 hsa-miR-6739-5p 0 1 0
chr22:29698128|29698333 hsa-miR-6758-5p 1 1 0
chr22:29698128|29698333 hsa-miR-6856-5p 0 1 0
chr22:29698128|29698333 hsa-miR-4665-5p 1 0 0
chr22:29698128|29698333 hsa-miR-3116 1 0 0
chr22:29698128|29698333 hsa-miR-6891-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4472 1 0 0
chr22:29698128|29698333 hsa-miR-541-3p 1 0 0
chr22:29698128|29698333 hsa-miR-6785-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6849-5p 1 0 0
chr22:29698128|29698333 hsa-miR-9851-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6837-5p 1 0 0
chr22:29698128|29698333 hsa-miR-6859-5p 0 1 0
chr22:29698128|29698333 hsa-miR-363-5p 1 0 0
chr22:29698128|29698333 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:29698128|29698333
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MCCPPYYSCTCQALLDSTPWHYITLHEWLCLVILGTGFSLSLSFFCQKPRD
Nucleotide Sequence CTGTGTTGTCCACCCTATTATTCATGTACCTGCCAGGCCCTGCTAGATAGCACCCCGTGGCATTACATAACACTTCATGAGTGGCTGTGTCTTGTAATTTTGGGGACAGGTTTCTCTCTTTCCCTCTCTTTTTTTTGTCAAAAGCCCAGAGACTGA
CircID chr22:29698128|29698333
ORF Type ORF2
Protein Length 63
Nucleotide Length 192
Protein Sequence MQLVVSLWAFDKKKRGKERNLSPKLQDTATHEVLCNATGCYLAGPGRYMNNRVDNTGWGDCCG
Nucleotide Sequence CTGCAGCTGGTTGTCAGTCTCTGGGCTTTTGACAAAAAAAAGAGAGGGAAAGAGAGAAACCTGTCCCCAAAATTACAAGACACAGCCACTCATGAAGTGTTATGTAATGCCACGGGGTGCTATCTAGCAGGGCCTGGCAGGTACATGAATAATAGGGTGGACAACACAGGTTGGGGGGACTGCTGTGGCTGA
CircID chr22:29698128|29698333
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MSVSGLLTKKREGKRETCPQNYKTQPLMKCYVMPRGAI
Nucleotide Sequence TTGTCAGTCTCTGGGCTTTTGACAAAAAAAAGAGAGGGAAAGAGAGAAACCTGTCCCCAAAATTACAAGACACAGCCACTCATGAAGTGTTATGTAATGCCACGGGGTGCTATCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab