CircRNA Information

General Information
circRNA Basic Information
CircID chr22:30019531|30019690
Strand -
CircType exon
Host Gene ENSG00000100330.14;
Algorism CIRI2;
Sequence AGTGCCTCTGGCCAGCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTGGAGAGGATCCCCTTTCTGCCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGGGTGCCGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:30019531|30019690 hsa-miR-484 0 0 1
chr22:30019531|30019690 hsa-miR-639 0 1 1
chr22:30019531|30019690 hsa-miR-645 0 0 1
chr22:30019531|30019690 hsa-miR-766-5p 0 0 1
chr22:30019531|30019690 hsa-miR-766-3p 0 0 1
chr22:30019531|30019690 hsa-miR-541-5p 0 0 1
chr22:30019531|30019690 hsa-miR-541-3p 0 0 1
chr22:30019531|30019690 hsa-miR-921 0 0 1
chr22:30019531|30019690 hsa-miR-1250-5p 0 0 1
chr22:30019531|30019690 hsa-miR-1250-3p 0 0 1
chr22:30019531|30019690 hsa-miR-615-5p 0 0 1
chr22:30019531|30019690 hsa-miR-1184 0 1 1
chr22:30019531|30019690 hsa-miR-654-5p 0 0 1
chr22:30019531|30019690 hsa-miR-339-3p 0 0 1
chr22:30019531|30019690 hsa-miR-767-3p 0 0 1
chr22:30019531|30019690 hsa-miR-298 0 1 0
chr22:30019531|30019690 hsa-miR-1469 1 0 0
chr22:30019531|30019690 hsa-miR-1976 0 1 0
chr22:30019531|30019690 hsa-miR-3195 0 1 0
chr22:30019531|30019690 hsa-miR-3907 1 1 0
chr22:30019531|30019690 hsa-miR-4456 0 1 0
chr22:30019531|30019690 hsa-miR-4741 1 0 0
chr22:30019531|30019690 hsa-miR-5787 0 1 0
chr22:30019531|30019690 hsa-miR-7704 0 1 0
chr22:30019531|30019690 hsa-miR-7974 1 0 0
chr22:30019531|30019690 hsa-miR-9899 1 1 0
chr22:30019531|30019690 hsa-miR-12121 1 0 0
chr22:30019531|30019690 hsa-miR-4435 0 1 0
chr22:30019531|30019690 hsa-miR-92a-1-5p 0 1 0
chr22:30019531|30019690 hsa-miR-323a-5p 1 0 0
chr22:30019531|30019690 hsa-miR-3157-5p 0 1 0
chr22:30019531|30019690 hsa-miR-4687-3p 1 0 0
chr22:30019531|30019690 hsa-miR-6762-3p 0 1 0
chr22:30019531|30019690 hsa-miR-6772-3p 0 1 0
chr22:30019531|30019690 hsa-miR-1909-5p 1 1 0
chr22:30019531|30019690 hsa-miR-3944-3p 1 0 0
chr22:30019531|30019690 hsa-miR-4640-5p 1 1 0
chr22:30019531|30019690 hsa-miR-6895-5p 0 1 0
chr22:30019531|30019690 hsa-miR-4707-5p 1 1 0
chr22:30019531|30019690 hsa-miR-3158-3p 1 0 0
chr22:30019531|30019690 hsa-miR-4746-3p 1 1 0
chr22:30019531|30019690 hsa-miR-3127-3p 1 0 0
chr22:30019531|30019690 hsa-miR-3620-5p 1 0 0
chr22:30019531|30019690 hsa-miR-1271-3p 1 0 0
chr22:30019531|30019690 hsa-miR-6791-5p 1 0 0
chr22:30019531|30019690 hsa-miR-6727-3p 0 1 0
chr22:30019531|30019690 hsa-miR-6837-5p 0 1 0
chr22:30019531|30019690 hsa-miR-1271-5p 1 0 0
chr22:30019531|30019690 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:30019531|30019690
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MQRPQPEREVAGAPALTRAEQPGWPWRGSPFCRQPREAHQSAGGCR
Nucleotide Sequence CTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTGGAGAGGATCCCCTTTCTGCCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGGGTGCCGA

CircID chr22:30019531|30019690
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MASRRCSDPSLNEKWQEHRRSLELSSLAGPGEDPLSADSLGKPTRVPGGAE
Nucleotide Sequence CTGGCCAGCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTGGAGAGGATCCCCTTTCTGCCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGGGTGCCGAG

CircID chr22:30019531|30019690
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MVGFPRLSAERGSSPGPARLLSSSERRCSCHFSFRLGSLQRRLARGT
Nucleotide Sequence CTGGTGGGCTTCCCTAGGCTGTCGGCAGAAAGGGGATCCTCTCCAGGGCCAGCCAGGCTGCTCAGCTCTAGTGAGCGCCGGTGCTCCTGCCACTTCTCGTTCAGGCTGGGGTCGCTGCAGCGCCGGCTGGCCAGAGGCACT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites