CircRNA Information

General Information
circRNA Basic Information
CircID chr22:30663675|30663871
Strand +
CircType exon
Host Gene ENSG00000167065.12;
Algorism CIRI2;
Sequence CAGATCACCATGGTCATCAATGTCTCAGTGGAGGTAGTGAACACCTTGTATGAGGATATCCAGTACATGCAGGTACCTGTGGCTGACTCCCCTAACTCACGTCTCTGTGACTTCTTTGACCCTATTGCTGACCATATCCACAGCGTGGAGATGAAGCAGGGCCGTACTTTGCTGCACTGTGCTGCTGGTGTGAGCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:30663675|30663871 hsa-miR-15a-5p 0 0 1
chr22:30663675|30663871 hsa-miR-15a-3p 0 0 1
chr22:30663675|30663871 hsa-miR-107 0 0 1
chr22:30663675|30663871 hsa-miR-148a-5p 0 0 1
chr22:30663675|30663871 hsa-miR-148a-3p 0 0 1
chr22:30663675|30663871 hsa-miR-224-5p 0 0 1
chr22:30663675|30663871 hsa-miR-224-3p 0 0 1
chr22:30663675|30663871 hsa-miR-15b-5p 0 0 1
chr22:30663675|30663871 hsa-miR-15b-3p 0 0 1
chr22:30663675|30663871 hsa-miR-152-5p 0 0 1
chr22:30663675|30663871 hsa-miR-152-3p 0 0 1
chr22:30663675|30663871 hsa-miR-195-5p 0 0 1
chr22:30663675|30663871 hsa-miR-195-3p 0 0 1
chr22:30663675|30663871 hsa-miR-381-5p 0 0 1
chr22:30663675|30663871 hsa-miR-381-3p 0 0 1
chr22:30663675|30663871 hsa-miR-148b-5p 0 0 1
chr22:30663675|30663871 hsa-miR-148b-3p 0 0 1
chr22:30663675|30663871 hsa-miR-424-5p 0 0 1
chr22:30663675|30663871 hsa-miR-424-3p 0 0 1
chr22:30663675|30663871 hsa-miR-497-5p 0 0 1
chr22:30663675|30663871 hsa-miR-497-3p 0 0 1
chr22:30663675|30663871 hsa-miR-545-5p 0 0 1
chr22:30663675|30663871 hsa-miR-545-3p 0 0 1
chr22:30663675|30663871 hsa-miR-591 0 0 1
chr22:30663675|30663871 hsa-miR-624-5p 0 0 1
chr22:30663675|30663871 hsa-miR-624-3p 0 0 1
chr22:30663675|30663871 hsa-miR-634 0 0 1
chr22:30663675|30663871 hsa-miR-300 0 1 1
chr22:30663675|30663871 hsa-miR-1182 1 0 1
chr22:30663675|30663871 hsa-miR-1226-5p 0 0 1
chr22:30663675|30663871 hsa-miR-1226-3p 0 0 1
chr22:30663675|30663871 hsa-miR-1228-5p 0 0 1
chr22:30663675|30663871 hsa-miR-1228-3p 0 0 1
chr22:30663675|30663871 hsa-miR-1291 0 0 1
chr22:30663675|30663871 hsa-miR-548k 0 0 1
chr22:30663675|30663871 hsa-miR-1243 0 0 1
chr22:30663675|30663871 hsa-miR-485-3p 0 0 1
chr22:30663675|30663871 hsa-miR-342-3p 0 0 1
chr22:30663675|30663871 hsa-miR-128 0 0 1
chr22:30663675|30663871 hsa-miR-103 0 0 1
chr22:30663675|30663871 hsa-miR-16 0 0 1
chr22:30663675|30663871 hsa-miR-220a 0 0 1
chr22:30663675|30663871 hsa-miR-602 1 0 0
chr22:30663675|30663871 hsa-miR-1265 1 0 0
chr22:30663675|30663871 hsa-miR-3138 1 0 0
chr22:30663675|30663871 hsa-miR-4284 0 1 0
chr22:30663675|30663871 hsa-miR-4462 1 0 0
chr22:30663675|30663871 hsa-miR-4502 0 1 0
chr22:30663675|30663871 hsa-miR-4530 1 1 0
chr22:30663675|30663871 hsa-miR-3977 0 1 0
chr22:30663675|30663871 hsa-miR-5698 1 0 0
chr22:30663675|30663871 hsa-miR-5702 0 1 0
chr22:30663675|30663871 hsa-miR-6863 0 1 0
chr22:30663675|30663871 hsa-miR-12122 0 1 0
chr22:30663675|30663871 hsa-miR-3157-5p 0 1 0
chr22:30663675|30663871 hsa-miR-124-5p 0 1 0
chr22:30663675|30663871 hsa-miR-1972 1 0 0
chr22:30663675|30663871 hsa-miR-24-3p 1 0 0
chr22:30663675|30663871 hsa-miR-181a-2-3p 0 1 0
chr22:30663675|30663871 hsa-miR-770-5p 1 0 0
chr22:30663675|30663871 hsa-miR-1229-5p 1 0 0
chr22:30663675|30663871 hsa-miR-4691-3p 0 1 0
chr22:30663675|30663871 hsa-miR-4764-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6824-5p 1 1 0
chr22:30663675|30663871 hsa-miR-6789-5p 1 0 0
chr22:30663675|30663871 hsa-miR-1289 1 0 0
chr22:30663675|30663871 hsa-miR-1225-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6826-5p 0 1 0
chr22:30663675|30663871 hsa-miR-6801-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6837-3p 0 1 0
chr22:30663675|30663871 hsa-miR-214-3p 1 0 0
chr22:30663675|30663871 hsa-miR-4761-5p 0 1 0
chr22:30663675|30663871 hsa-miR-449b-3p 0 1 0
chr22:30663675|30663871 hsa-miR-3173-5p 0 1 0
chr22:30663675|30663871 hsa-miR-6812-5p 1 0 0
chr22:30663675|30663871 hsa-miR-1343-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6752-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6851-5p 1 0 0
chr22:30663675|30663871 hsa-miR-7111-5p 1 0 0
chr22:30663675|30663871 hsa-miR-4726-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6777-5p 1 1 0
chr22:30663675|30663871 hsa-miR-6889-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6799-3p 0 1 0
chr22:30663675|30663871 hsa-miR-3679-5p 1 0 0
chr22:30663675|30663871 hsa-miR-5591-5p 1 0 0
chr22:30663675|30663871 hsa-miR-6775-3p 0 1 0
chr22:30663675|30663871 hsa-miR-3619-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:30663675|30663871
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MVINVSVEVVNTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVS
Nucleotide Sequence ATGGTCATCAATGTCTCAGTGGAGGTAGTGAACACCTTGTATGAGGATATCCAGTACATGCAGGTACCTGTGGCTGACTCCCCTAACTCACGTCTCTGTGACTTCTTTGACCCTATTGCTGACCATATCCACAGCGTGGAGATGAAGCAGGGCCGTACTTTGCTGCACTGTGCTGCTGGTGTGAGC
CircID chr22:30663675|30663871
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MRISSTCRYLWLTPLTHVSVTSLTLLLTISTAWR
Nucleotide Sequence ATGAGGATATCCAGTACATGCAGGTACCTGTGGCTGACTCCCCTAACTCACGTCTCTGTGACTTCTTTGACCCTATTGCTGACCATATCCACAGCGTGGAGATGA
CircID chr22:30663675|30663871
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MWIWSAIGSKKSQRRELGESATGTCMYWISSYKVFTTSTETLMTMVI
Nucleotide Sequence CTGTGGATATGGTCAGCAATAGGGTCAAAGAAGTCACAGAGACGTGAGTTAGGGGAGTCAGCCACAGGTACCTGCATGTACTGGATATCCTCATACAAGGTGTTCACTACCTCCACTGAGACATTGATGACCATGGTGATC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab