CircRNA Information

General Information
circRNA Basic Information
CircID chr22:31091384|31091746
Strand +
CircType exon
Host Gene ENSG00000183963.17;
Algorism CIRI2;
Sequence GGGTGATGGTGCTCTTGCCCCCACTACTGGTGCTGAGTAGGGTCGGGGGCGCCCGCAGCCCCAGTGTCAGTTCTGAGTGGGGAGAAAGGTGGCTGTCAGGAGGATCAGGTGGAGTGAGGGCAGTGCCAGACAAGGTTGATAATGCCCTCGCTCCCAGCACACCCTTTGGAGACACCCTGAGTCCTGGCCGCAGCACCTGTCCTGCATGCAGAAGTGCGGTTGCAGGCACTCATCCCCATTGGGGAGGCAGTGGGGGGCGCCTACCTGCCCTCTGGTTGCCTGTGGGCAGCAGCACCCGGCCTGTGGAGGCCTGGCCACGGCCGTCCTTGATCTCGATGGTGAATGTGGTCTTCATACTGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:31091384|31091746 hsa-miR-29a-5p 0 0 1
chr22:31091384|31091746 hsa-miR-29a-3p 0 0 1
chr22:31091384|31091746 hsa-miR-31-5p 0 0 1
chr22:31091384|31091746 hsa-miR-31-3p 0 0 1
chr22:31091384|31091746 hsa-miR-197-5p 0 0 1
chr22:31091384|31091746 hsa-miR-197-3p 0 0 1
chr22:31091384|31091746 hsa-miR-181c-5p 0 0 1
chr22:31091384|31091746 hsa-miR-181c-3p 0 0 1
chr22:31091384|31091746 hsa-miR-29c-5p 0 0 1
chr22:31091384|31091746 hsa-miR-29c-3p 0 0 1
chr22:31091384|31091746 hsa-miR-335-5p 0 0 1
chr22:31091384|31091746 hsa-miR-335-3p 0 0 1
chr22:31091384|31091746 hsa-miR-181d-5p 0 0 1
chr22:31091384|31091746 hsa-miR-181d-3p 0 0 1
chr22:31091384|31091746 hsa-miR-519e-5p 0 0 1
chr22:31091384|31091746 hsa-miR-519e-3p 0 0 1
chr22:31091384|31091746 hsa-miR-510-5p 0 0 1
chr22:31091384|31091746 hsa-miR-510-3p 0 0 1
chr22:31091384|31091746 hsa-miR-552-5p 0 0 1
chr22:31091384|31091746 hsa-miR-552-3p 0 0 1
chr22:31091384|31091746 hsa-miR-604 0 0 1
chr22:31091384|31091746 hsa-miR-632 0 0 1
chr22:31091384|31091746 hsa-miR-920 0 0 1
chr22:31091384|31091746 hsa-miR-1231 0 0 1
chr22:31091384|31091746 hsa-miR-1204 0 1 1
chr22:31091384|31091746 hsa-miR-1286 0 0 1
chr22:31091384|31091746 hsa-miR-1255a 0 0 1
chr22:31091384|31091746 hsa-miR-1266-5p 0 0 1
chr22:31091384|31091746 hsa-miR-1266-3p 0 0 1
chr22:31091384|31091746 hsa-miR-512-5p 0 0 1
chr22:31091384|31091746 hsa-miR-486-3p 0 0 1
chr22:31091384|31091746 hsa-miR-767-5p 0 0 1
chr22:31091384|31091746 hsa-miR-199b-3p 0 0 1
chr22:31091384|31091746 hsa-miR-199a-3p 0 0 1
chr22:31091384|31091746 hsa-miR-483-3p 0 0 1
chr22:31091384|31091746 hsa-miR-515-3p 0 0 1
chr22:31091384|31091746 hsa-miR-515-5p 0 0 1
chr22:31091384|31091746 hsa-miR-550 0 0 1
chr22:31091384|31091746 hsa-miR-1255b 0 0 1
chr22:31091384|31091746 hsa-miR-181a 0 0 1
chr22:31091384|31091746 hsa-miR-181b 0 0 1
chr22:31091384|31091746 hsa-miR-544 0 0 1
chr22:31091384|31091746 hsa-miR-29b 0 0 1
chr22:31091384|31091746 hsa-miR-602 1 0 0
chr22:31091384|31091746 hsa-miR-618 0 1 0
chr22:31091384|31091746 hsa-miR-637 1 0 0
chr22:31091384|31091746 hsa-miR-663a 1 0 0
chr22:31091384|31091746 hsa-miR-1538 1 0 0
chr22:31091384|31091746 hsa-miR-4286 0 1 0
chr22:31091384|31091746 hsa-miR-4436a 0 1 0
chr22:31091384|31091746 hsa-miR-4437 1 1 0
chr22:31091384|31091746 hsa-miR-4518 0 1 0
chr22:31091384|31091746 hsa-miR-3960 1 0 0
chr22:31091384|31091746 hsa-miR-451b 0 1 0
chr22:31091384|31091746 hsa-miR-4734 1 1 0
chr22:31091384|31091746 hsa-miR-4767 1 1 0
chr22:31091384|31091746 hsa-miR-6090 0 1 0
chr22:31091384|31091746 hsa-miR-6860 1 0 0
chr22:31091384|31091746 hsa-miR-7974 1 0 0
chr22:31091384|31091746 hsa-miR-9899 0 1 0
chr22:31091384|31091746 hsa-miR-4435 0 1 0
chr22:31091384|31091746 hsa-miR-6749-3p 1 0 0
chr22:31091384|31091746 hsa-miR-18a-3p 0 1 0
chr22:31091384|31091746 hsa-miR-6836-3p 0 1 0
chr22:31091384|31091746 hsa-miR-4687-3p 1 0 0
chr22:31091384|31091746 hsa-miR-5187-5p 0 1 0
chr22:31091384|31091746 hsa-miR-3663-3p 1 1 0
chr22:31091384|31091746 hsa-miR-6089 1 0 0
chr22:31091384|31091746 hsa-miR-4722-5p 1 0 0
chr22:31091384|31091746 hsa-miR-4755-3p 0 1 0
chr22:31091384|31091746 hsa-miR-6721-5p 0 1 0
chr22:31091384|31091746 hsa-miR-4761-3p 0 1 0
chr22:31091384|31091746 hsa-miR-5589-5p 0 1 0
chr22:31091384|31091746 hsa-miR-6845-3p 1 0 0
chr22:31091384|31091746 hsa-miR-7108-5p 1 0 0
chr22:31091384|31091746 hsa-miR-185-3p 0 1 0
chr22:31091384|31091746 hsa-miR-6882-3p 1 0 0
chr22:31091384|31091746 hsa-miR-939-3p 1 0 0
chr22:31091384|31091746 hsa-miR-1226-5p 1 1 0
chr22:31091384|31091746 hsa-miR-1909-5p 0 1 0
chr22:31091384|31091746 hsa-miR-6757-3p 0 1 0
chr22:31091384|31091746 hsa-miR-3616-3p 0 1 0
chr22:31091384|31091746 hsa-miR-3162-5p 1 0 0
chr22:31091384|31091746 hsa-miR-3065-3p 0 1 0
chr22:31091384|31091746 hsa-miR-519d-5p 0 1 0
chr22:31091384|31091746 hsa-miR-1224-3p 0 1 0
chr22:31091384|31091746 hsa-miR-3151-3p 1 1 0
chr22:31091384|31091746 hsa-miR-6789-3p 0 1 0
chr22:31091384|31091746 hsa-miR-888-3p 0 1 0
chr22:31091384|31091746 hsa-miR-6890-3p 0 1 0
chr22:31091384|31091746 hsa-miR-4787-3p 0 1 0
chr22:31091384|31091746 hsa-miR-367-5p 0 1 0
chr22:31091384|31091746 hsa-miR-4763-3p 1 0 0
chr22:31091384|31091746 hsa-miR-6726-5p 1 0 0
chr22:31091384|31091746 hsa-miR-6743-5p 1 0 0
chr22:31091384|31091746 hsa-miR-6752-5p 1 0 0
chr22:31091384|31091746 hsa-miR-6803-5p 1 0 0
chr22:31091384|31091746 hsa-miR-6751-5p 0 1 0
chr22:31091384|31091746 hsa-miR-6879-5p 0 1 0
chr22:31091384|31091746 hsa-miR-6754-3p 0 1 0
chr22:31091384|31091746 hsa-miR-328-5p 0 1 0
chr22:31091384|31091746 hsa-miR-4632-5p 0 1 0
chr22:31091384|31091746 hsa-miR-4685-5p 1 1 0
chr22:31091384|31091746 hsa-miR-4436b-3p 0 1 0
chr22:31091384|31091746 hsa-miR-1271-3p 0 1 0
chr22:31091384|31091746 hsa-miR-7843-5p 0 1 0
chr22:31091384|31091746 hsa-miR-324-3p 0 1 0
chr22:31091384|31091746 hsa-miR-9851-3p 0 1 0
chr22:31091384|31091746 hsa-miR-10392-3p 1 0 0
chr22:31091384|31091746 hsa-miR-3622a-3p 0 1 0
chr22:31091384|31091746 hsa-miR-33b-3p 0 1 0
chr22:31091384|31091746 hsa-miR-3622b-3p 0 1 0
chr22:31091384|31091746 hsa-miR-412-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:31091384|31091746
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MAAAPVLHAEVRLQALIPIGEAVGGAYLPSGCLWAAAPGLWRPGHGRP
Nucleotide Sequence CTGGCCGCAGCACCTGTCCTGCATGCAGAAGTGCGGTTGCAGGCACTCATCCCCATTGGGGAGGCAGTGGGGGGCGCCTACCTGCCCTCTGGTTGCCTGTGGGCAGCAGCACCCGGCCTGTGGAGGCCTGGCCACGGCCGTCCTTGA
CircID chr22:31091384|31091746
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MSCMQKCGCRHSSPLGRQWGAPTCPLVACGQQHPACGGLATAVLDLDGECGLHTA
Nucleotide Sequence CTGTCCTGCATGCAGAAGTGCGGTTGCAGGCACTCATCCCCATTGGGGAGGCAGTGGGGGGCGCCTACCTGCCCTCTGGTTGCCTGTGGGCAGCAGCACCCGGCCTGTGGAGGCCTGGCCACGGCCGTCCTTGATCTCGATGGTGAATGTGGTCTTCATACTGCC
CircID chr22:31091384|31091746
ORF Type ORF3
Protein Length 119
Nucleotide Length 357
Protein Sequence MVLLPPLLVLSRVGGARSPSVSSEWGERWLSGGSGGVRAVPDKVDNALAPSTPFGDTLSPGRSTCPACRSAVAGTHPHWGGSGGRLPALWLPVGSSTRPVEAWPRPSLISMVNVVFILP
Nucleotide Sequence ATGGTGCTCTTGCCCCCACTACTGGTGCTGAGTAGGGTCGGGGGCGCCCGCAGCCCCAGTGTCAGTTCTGAGTGGGGAGAAAGGTGGCTGTCAGGAGGATCAGGTGGAGTGAGGGCAGTGCCAGACAAGGTTGATAATGCCCTCGCTCCCAGCACACCCTTTGGAGACACCCTGAGTCCTGGCCGCAGCACCTGTCCTGCATGCAGAAGTGCGGTTGCAGGCACTCATCCCCATTGGGGAGGCAGTGGGGGGCGCCTACCTGCCCTCTGGTTGCCTGTGGGCAGCAGCACCCGGCCTGTGGAGGCCTGGCCACGGCCGTCCTTGATCTCGATGGTGAATGTGGTCTTCATACTGCCC
CircID chr22:31091384|31091746
ORF Type ORF4
Protein Length 52
Nucleotide Length 159
Protein Sequence MQPHFCMQDRCCGQDSGCLQRVCWERGHYQPCLALPSLHLILLTATFLPTQN
Nucleotide Sequence CTGCAACCGCACTTCTGCATGCAGGACAGGTGCTGCGGCCAGGACTCAGGGTGTCTCCAAAGGGTGTGCTGGGAGCGAGGGCATTATCAACCTTGTCTGGCACTGCCCTCACTCCACCTGATCCTCCTGACAGCCACCTTTCTCCCCACTCAGAACTGA
CircID chr22:31091384|31091746
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MGMSACNRTSACRTGAAARTQGVSKGCAGSEGIINLVWHCPHST
Nucleotide Sequence ATGGGGATGAGTGCCTGCAACCGCACTTCTGCATGCAGGACAGGTGCTGCGGCCAGGACTCAGGGTGTCTCCAAAGGGTGTGCTGGGAGCGAGGGCATTATCAACCTTGTCTGGCACTGCCCTCACTCCACCTGA
CircID chr22:31091384|31091746
ORF Type ORF6
Protein Length 41
Nucleotide Length 126
Protein Sequence MKTTFTIEIKDGRGQASTGRVLLPTGNQRAGRRPPLPPQWG
Nucleotide Sequence ATGAAGACCACATTCACCATCGAGATCAAGGACGGCCGTGGCCAGGCCTCCACAGGCCGGGTGCTGCTGCCCACAGGCAACCAGAGGGCAGGTAGGCGCCCCCCACTGCCTCCCCAATGGGGATGA
CircID chr22:31091384|31091746
ORF Type ORF7
Protein Length 70
Nucleotide Length 210
Protein Sequence MHAGQVLRPGLRVSPKGVLGARALSTLSGTALTPPDPPDSHLSPHSELTLGLRAPPTLLSTSSGGKSTIT
Nucleotide Sequence CTGCATGCAGGACAGGTGCTGCGGCCAGGACTCAGGGTGTCTCCAAAGGGTGTGCTGGGAGCGAGGGCATTATCAACCTTGTCTGGCACTGCCCTCACTCCACCTGATCCTCCTGACAGCCACCTTTCTCCCCACTCAGAACTGACACTGGGGCTGCGGGCGCCCCCGACCCTACTCAGCACCAGTAGTGGGGGCAAGAGCACCATCACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab