CircRNA Information

General Information
circRNA Basic Information
CircID chr22:31099748|31099881
Strand -
CircType exon
Host Gene ENSG00000183963.17;
Algorism CIRI2;
Sequence GTCGACATCCAGAACTTCTCCTCCAGCTGGAGTGATGGGATGGCCTTCTGTGCCCTGGTGCACAACTTCTTCCCTGAGGCCTTCGACTATGGGCAGCTTAGCCCTCAGAACCGACGCCAGAACTTCGAGGTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:31099748|31099881 hsa-miR-22-5p 0 0 1
chr22:31099748|31099881 hsa-miR-22-3p 0 0 1
chr22:31099748|31099881 hsa-miR-382-5p 0 0 1
chr22:31099748|31099881 hsa-miR-382-3p 0 0 1
chr22:31099748|31099881 hsa-miR-766-5p 0 0 1
chr22:31099748|31099881 hsa-miR-766-3p 0 0 1
chr22:31099748|31099881 hsa-miR-765 0 1 1
chr22:31099748|31099881 hsa-miR-1299 0 0 1
chr22:31099748|31099881 hsa-miR-1266-5p 0 0 1
chr22:31099748|31099881 hsa-miR-1266-3p 0 0 1
chr22:31099748|31099881 hsa-miR-767-5p 0 0 1
chr22:31099748|31099881 hsa-miR-508-5p 0 0 1
chr22:31099748|31099881 hsa-miR-1207-3p 0 0 1
chr22:31099748|31099881 hsa-miR-483-3p 0 0 1
chr22:31099748|31099881 hsa-miR-516b 0 0 1
chr22:31099748|31099881 hsa-miR-4270 1 0 0
chr22:31099748|31099881 hsa-miR-4493 0 1 0
chr22:31099748|31099881 hsa-miR-4518 0 1 0
chr22:31099748|31099881 hsa-miR-4656 1 0 0
chr22:31099748|31099881 hsa-miR-4721 0 1 0
chr22:31099748|31099881 hsa-miR-4739 1 0 0
chr22:31099748|31099881 hsa-miR-4784 0 1 0
chr22:31099748|31099881 hsa-miR-5703 0 1 0
chr22:31099748|31099881 hsa-miR-6126 1 0 0
chr22:31099748|31099881 hsa-miR-9500 0 1 0
chr22:31099748|31099881 hsa-miR-6894-5p 1 0 0
chr22:31099748|31099881 hsa-miR-27a-5p 1 0 0
chr22:31099748|31099881 hsa-miR-4655-5p 1 0 0
chr22:31099748|31099881 hsa-miR-197-5p 1 0 0
chr22:31099748|31099881 hsa-miR-5008-5p 1 0 0
chr22:31099748|31099881 hsa-miR-5088-5p 1 0 0
chr22:31099748|31099881 hsa-miR-1226-5p 1 1 0
chr22:31099748|31099881 hsa-miR-4640-5p 1 0 0
chr22:31099748|31099881 hsa-miR-6753-5p 1 1 0
chr22:31099748|31099881 hsa-miR-3614-5p 1 0 0
chr22:31099748|31099881 hsa-miR-1307-3p 1 0 0
chr22:31099748|31099881 hsa-miR-671-3p 0 1 0
chr22:31099748|31099881 hsa-miR-4529-5p 0 1 0
chr22:31099748|31099881 hsa-miR-493-3p 1 0 0
chr22:31099748|31099881 hsa-miR-1233-5p 1 0 0
chr22:31099748|31099881 hsa-miR-6775-5p 1 0 0
chr22:31099748|31099881 hsa-miR-11181-3p 0 1 0
chr22:31099748|31099881 hsa-miR-5196-5p 1 0 0
chr22:31099748|31099881 hsa-miR-6780b-5p 1 0 0
chr22:31099748|31099881 hsa-miR-4685-5p 0 1 0
chr22:31099748|31099881 hsa-miR-6735-5p 1 0 0
chr22:31099748|31099881 hsa-miR-6848-5p 1 0 0
chr22:31099748|31099881 hsa-miR-6837-5p 0 1 0
chr22:31099748|31099881 hsa-miR-502-3p 0 1 0
chr22:31099748|31099881 hsa-miR-501-3p 0 1 0
chr22:31099748|31099881 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:31099748|31099881
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MAFCALVHNFFPEAFDYGQLSPQNRRQNFEV
Nucleotide Sequence ATGGCCTTCTGTGCCCTGGTGCACAACTTCTTCCCTGAGGCCTTCGACTATGGGCAGCTTAGCCCTCAGAACCGACGCCAGAACTTCGAGGTG

CircID chr22:31099748|31099881
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MGWPSVPWCTTSSLRPSTMGSLALRTDARTSRW
Nucleotide Sequence ATGGGATGGCCTTCTGTGCCCTGGTGCACAACTTCTTCCCTGAGGCCTTCGACTATGGGCAGCTTAGCCCTCAGAACCGACGCCAGAACTTCGAGGTGG

CircID chr22:31099748|31099881
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MASVLRAKLPIVEGLREEVVHQGTEGHPITPAGGEVLDVD
Nucleotide Sequence CTGGCGTCGGTTCTGAGGGCTAAGCTGCCCATAGTCGAAGGCCTCAGGGAAGAAGTTGTGCACCAGGGCACAGAAGGCCATCCCATCACTCCAGCTGGAGGAGAAGTTCTGGATGTCGAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites