CircRNA Information

General Information
circRNA Basic Information
CircID chr22:31134334|31134519
Strand -
CircType exon
Host Gene ENSG00000185133.12;
Algorism CIRI2;
Sequence CTGATCGGGAGGCCCTGGCGCCCAACAGCCTGTCTCCTAGTCCCCAGGGCCATCGGGGGCTGGAGGAAGGGGGCCTGGGGCCCTGAGGGTGGGGTAGGCAGATGGGCCAAGGTGACCACCATTCTGCCTCAATCTTTTGCAAGCCCACCTGCCTCTCTCCTGCTGCTCCTCCAGCTGTATCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:31134334|31134519 hsa-miR-15a-5p 0 0 1
chr22:31134334|31134519 hsa-miR-15a-3p 0 0 1
chr22:31134334|31134519 hsa-miR-214-5p 0 0 1
chr22:31134334|31134519 hsa-miR-214-3p 0 0 1
chr22:31134334|31134519 hsa-miR-15b-5p 0 0 1
chr22:31134334|31134519 hsa-miR-15b-3p 0 0 1
chr22:31134334|31134519 hsa-miR-185-5p 0 0 1
chr22:31134334|31134519 hsa-miR-185-3p 0 0 1
chr22:31134334|31134519 hsa-miR-195-5p 0 0 1
chr22:31134334|31134519 hsa-miR-195-3p 0 0 1
chr22:31134334|31134519 hsa-miR-328-5p 0 0 1
chr22:31134334|31134519 hsa-miR-328-3p 0 0 1
chr22:31134334|31134519 hsa-miR-424-5p 0 0 1
chr22:31134334|31134519 hsa-miR-424-3p 0 0 1
chr22:31134334|31134519 hsa-miR-497-5p 0 0 1
chr22:31134334|31134519 hsa-miR-497-3p 0 0 1
chr22:31134334|31134519 hsa-miR-527 0 0 1
chr22:31134334|31134519 hsa-miR-766-5p 0 0 1
chr22:31134334|31134519 hsa-miR-766-3p 0 0 1
chr22:31134334|31134519 hsa-miR-765 0 1 1
chr22:31134334|31134519 hsa-miR-541-5p 0 0 1
chr22:31134334|31134519 hsa-miR-541-3p 0 0 1
chr22:31134334|31134519 hsa-miR-940 0 0 1
chr22:31134334|31134519 hsa-miR-1291 0 1 1
chr22:31134334|31134519 hsa-miR-1304-5p 0 0 1
chr22:31134334|31134519 hsa-miR-1304-3p 0 0 1
chr22:31134334|31134519 hsa-miR-1266-5p 0 0 1
chr22:31134334|31134519 hsa-miR-1266-3p 0 0 1
chr22:31134334|31134519 hsa-miR-1827 0 0 1
chr22:31134334|31134519 hsa-miR-296-5p 0 1 1
chr22:31134334|31134519 hsa-miR-654-5p 0 1 1
chr22:31134334|31134519 hsa-miR-1207-3p 0 0 1
chr22:31134334|31134519 hsa-miR-876-3p 0 0 1
chr22:31134334|31134519 hsa-miR-518a-5p 0 0 1
chr22:31134334|31134519 hsa-miR-323-5p 0 0 1
chr22:31134334|31134519 hsa-miR-16 0 0 1
chr22:31134334|31134519 hsa-miR-298 1 0 0
chr22:31134334|31134519 hsa-miR-4306 0 1 0
chr22:31134334|31134519 hsa-miR-4313 0 1 0
chr22:31134334|31134519 hsa-miR-3652 1 0 0
chr22:31134334|31134519 hsa-miR-3918 0 1 0
chr22:31134334|31134519 hsa-miR-4429 1 0 0
chr22:31134334|31134519 hsa-miR-4430 1 0 0
chr22:31134334|31134519 hsa-miR-3135b 1 1 0
chr22:31134334|31134519 hsa-miR-4512 0 1 0
chr22:31134334|31134519 hsa-miR-4688 1 1 0
chr22:31134334|31134519 hsa-miR-5090 1 0 0
chr22:31134334|31134519 hsa-miR-6081 0 1 0
chr22:31134334|31134519 hsa-miR-6165 0 1 0
chr22:31134334|31134519 hsa-miR-8085 1 0 0
chr22:31134334|31134519 hsa-miR-8089 0 1 0
chr22:31134334|31134519 hsa-miR-9899 0 1 0
chr22:31134334|31134519 hsa-miR-150-3p 1 0 0
chr22:31134334|31134519 hsa-miR-323a-5p 0 1 0
chr22:31134334|31134519 hsa-miR-212-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4687-3p 0 1 0
chr22:31134334|31134519 hsa-miR-6720-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6510-5p 1 1 0
chr22:31134334|31134519 hsa-miR-6089 1 0 0
chr22:31134334|31134519 hsa-miR-6880-5p 1 0 0
chr22:31134334|31134519 hsa-miR-7847-3p 1 1 0
chr22:31134334|31134519 hsa-miR-4695-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6746-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4722-5p 0 1 0
chr22:31134334|31134519 hsa-miR-874-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6727-5p 1 0 0
chr22:31134334|31134519 hsa-miR-2467-3p 1 0 0
chr22:31134334|31134519 hsa-miR-6810-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6852-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4763-5p 0 1 0
chr22:31134334|31134519 hsa-miR-30c-2-3p 0 1 0
chr22:31134334|31134519 hsa-miR-5001-3p 0 1 0
chr22:31134334|31134519 hsa-miR-3667-3p 0 1 0
chr22:31134334|31134519 hsa-miR-7160-3p 0 1 0
chr22:31134334|31134519 hsa-miR-423-5p 1 1 0
chr22:31134334|31134519 hsa-let-7e-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4652-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6813-3p 0 1 0
chr22:31134334|31134519 hsa-miR-5088-3p 0 1 0
chr22:31134334|31134519 hsa-miR-6777-3p 0 1 0
chr22:31134334|31134519 hsa-miR-4524a-3p 0 1 0
chr22:31134334|31134519 hsa-miR-5587-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4524b-3p 0 1 0
chr22:31134334|31134519 hsa-miR-6503-3p 0 1 0
chr22:31134334|31134519 hsa-miR-4650-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6778-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6893-5p 0 1 0
chr22:31134334|31134519 hsa-miR-1343-5p 1 0 0
chr22:31134334|31134519 hsa-miR-5001-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6743-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6803-5p 1 0 0
chr22:31134334|31134519 hsa-miR-1249-5p 1 1 0
chr22:31134334|31134519 hsa-miR-6722-3p 1 0 0
chr22:31134334|31134519 hsa-miR-6808-5p 0 1 0
chr22:31134334|31134519 hsa-miR-3127-3p 0 1 0
chr22:31134334|31134519 hsa-miR-4728-5p 1 0 0
chr22:31134334|31134519 hsa-miR-4649-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6735-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6831-5p 1 0 0
chr22:31134334|31134519 hsa-miR-939-5p 1 0 0
chr22:31134334|31134519 hsa-miR-6511a-5p 0 1 0
chr22:31134334|31134519 hsa-miR-10396a-3p 0 1 0
chr22:31134334|31134519 hsa-miR-10396b-3p 0 1 0
chr22:31134334|31134519 hsa-miR-6856-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4700-5p 0 1 0
chr22:31134334|31134519 hsa-miR-4667-5p 0 1 0
chr22:31134334|31134519 hsa-miR-10398-5p 1 1 0
chr22:31134334|31134519 hsa-miR-6791-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6756-3p 0 1 0
chr22:31134334|31134519 hsa-miR-6792-3p 0 1 0
chr22:31134334|31134519 hsa-miR-6775-3p 1 0 0
chr22:31134334|31134519 hsa-miR-6512-3p 0 1 0
chr22:31134334|31134519 hsa-miR-4691-5p 0 1 0
chr22:31134334|31134519 hsa-miR-3619-5p 0 1 0
chr22:31134334|31134519 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:31134334|31134519
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence LIGRPWRPTACLLVPRAIGGWRKGAWGPEGGVGRWAKVTTILPQSFASPPASLLLLLQLYLH
Nucleotide Sequence CTGATCGGGAGGCCCTGGCGCCCAACAGCCTGTCTCCTAGTCCCCAGGGCCATCGGGGGCTGGAGGAAGGGGGCCTGGGGCCCTGAGGGTGGGGTAGGCAGATGGGCCAAGGTGACCACCATTCTGCCTCAATCTTTTGCAAGCCCACCTGCCTCTCTCCTGCTGCTCCTCCAGCTGTATCTGCAC
CircID chr22:31134334|31134519
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MGQGDHHSASIFCKPTCLSPAAPPAVSA
Nucleotide Sequence ATGGGCCAAGGTGACCACCATTCTGCCTCAATCTTTTGCAAGCCCACCTGCCTCTCTCCTGCTGCTCCTCCAGCTGTATCTGCA
CircID chr22:31134334|31134519
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MEEQQERGRWACKRLRQNGGHLGPSAYPTLRAPGPLPPAPDGPGD
Nucleotide Sequence CTGGAGGAGCAGCAGGAGAGAGGCAGGTGGGCTTGCAAAAGATTGAGGCAGAATGGTGGTCACCTTGGCCCATCTGCCTACCCCACCCTCAGGGCCCCAGGCCCCCTTCCTCCAGCCCCCGATGGCCCTGGGGACTAG
CircID chr22:31134334|31134519
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MVVTLAHLPTPPSGPQAPFLQPPMALGTRRQAVGRQGLPI
Nucleotide Sequence ATGGTGGTCACCTTGGCCCATCTGCCTACCCCACCCTCAGGGCCCCAGGCCCCCTTCCTCCAGCCCCCGATGGCCCTGGGGACTAGGAGACAGGCTGTTGGGCGCCAGGGCCTCCCGATC
CircID chr22:31134334|31134519
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MQKIEAEWWSPWPICLPHPQGPRPPSSSPRWPWGLGDRLLGARASRS
Nucleotide Sequence TTGCAAAAGATTGAGGCAGAATGGTGGTCACCTTGGCCCATCTGCCTACCCCACCCTCAGGGCCCCAGGCCCCCTTCCTCCAGCCCCCGATGGCCCTGGGGACTAGGAGACAGGCTGTTGGGCGCCAGGGCCTCCCGATCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab