CircRNA Information

General Information
circRNA Basic Information
CircID chr22:31278423|31278697
Strand -
CircType exon
Host Gene ENSG00000182541.16;
Algorism CIRI2;
Sequence CCGGGACTCACCTCCCTAGCCCTGGCCCAGCCCCCTGCAGGGGGGTGTTCTACAGCCAGCATTGCCCCTCTGTGCCCCATTCCTGCTGTGAGCAGGGCCGTCCGGGCTTCCTGTGGATTGGCGGAATGTTTAGAAGCAGAACAAGCCATTCCTATTACCTCCCCAGGAGGCAAGTGGGCGCAGCACCAGGGAAATGTATCTCCACAGGTTCTGGGGCCTAGTTACTGTCTGTAAATCCAATACTTGCCTGAAAGCTGTGAAGAAGAAAAAAACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:31278423|31278697 hsa-miR-27a-5p 0 0 1
chr22:31278423|31278697 hsa-miR-27a-3p 0 0 1
chr22:31278423|31278697 hsa-miR-214-5p 0 0 1
chr22:31278423|31278697 hsa-miR-214-3p 0 0 1
chr22:31278423|31278697 hsa-miR-27b-5p 0 0 1
chr22:31278423|31278697 hsa-miR-27b-3p 0 0 1
chr22:31278423|31278697 hsa-miR-135b-5p 0 0 1
chr22:31278423|31278697 hsa-miR-135b-3p 0 0 1
chr22:31278423|31278697 hsa-miR-412-5p 0 0 1
chr22:31278423|31278697 hsa-miR-412-3p 0 0 1
chr22:31278423|31278697 hsa-miR-620 0 0 1
chr22:31278423|31278697 hsa-miR-649 0 0 1
chr22:31278423|31278697 hsa-miR-543 0 0 1
chr22:31278423|31278697 hsa-miR-939-5p 0 0 1
chr22:31278423|31278697 hsa-miR-939-3p 0 0 1
chr22:31278423|31278697 hsa-miR-1178-5p 0 0 1
chr22:31278423|31278697 hsa-miR-1178-3p 0 0 1
chr22:31278423|31278697 hsa-miR-1205 0 0 1
chr22:31278423|31278697 hsa-miR-1290 0 0 1
chr22:31278423|31278697 hsa-miR-1291 0 0 1
chr22:31278423|31278697 hsa-miR-1270 0 0 1
chr22:31278423|31278697 hsa-miR-1321 0 0 1
chr22:31278423|31278697 hsa-miR-1324 0 0 1
chr22:31278423|31278697 hsa-miR-671-5p 0 0 1
chr22:31278423|31278697 hsa-miR-486-3p 0 0 1
chr22:31278423|31278697 hsa-miR-423-5p 1 0 1
chr22:31278423|31278697 hsa-miR-767-3p 0 0 1
chr22:31278423|31278697 hsa-miR-513a-5p 0 0 1
chr22:31278423|31278697 hsa-miR-876-5p 0 0 1
chr22:31278423|31278697 hsa-miR-1274a 0 0 1
chr22:31278423|31278697 hsa-miR-135a 0 0 1
chr22:31278423|31278697 hsa-miR-612 1 0 0
chr22:31278423|31278697 hsa-miR-762 1 0 0
chr22:31278423|31278697 hsa-miR-1295a 1 0 0
chr22:31278423|31278697 hsa-miR-1538 1 0 0
chr22:31278423|31278697 hsa-miR-3147 1 0 0
chr22:31278423|31278697 hsa-miR-4260 1 0 0
chr22:31278423|31278697 hsa-miR-4269 1 0 0
chr22:31278423|31278697 hsa-miR-4462 1 0 0
chr22:31278423|31278697 hsa-miR-4479 1 0 0
chr22:31278423|31278697 hsa-miR-4488 1 0 0
chr22:31278423|31278697 hsa-miR-4498 1 0 0
chr22:31278423|31278697 hsa-miR-4505 1 0 0
chr22:31278423|31278697 hsa-miR-2392 1 0 0
chr22:31278423|31278697 hsa-miR-4507 1 0 0
chr22:31278423|31278697 hsa-miR-4508 1 0 0
chr22:31278423|31278697 hsa-miR-1587 1 0 0
chr22:31278423|31278697 hsa-miR-4651 1 0 0
chr22:31278423|31278697 hsa-miR-4656 1 0 0
chr22:31278423|31278697 hsa-miR-4683 1 0 0
chr22:31278423|31278697 hsa-miR-4688 1 0 0
chr22:31278423|31278697 hsa-miR-4692 1 0 0
chr22:31278423|31278697 hsa-miR-4734 1 0 0
chr22:31278423|31278697 hsa-miR-4741 1 0 0
chr22:31278423|31278697 hsa-miR-5787 1 0 0
chr22:31278423|31278697 hsa-miR-6081 1 0 0
chr22:31278423|31278697 hsa-miR-6085 1 0 0
chr22:31278423|31278697 hsa-miR-6086 1 0 0
chr22:31278423|31278697 hsa-miR-6132 1 0 0
chr22:31278423|31278697 hsa-miR-6860 1 0 0
chr22:31278423|31278697 hsa-miR-12115 1 0 0
chr22:31278423|31278697 hsa-miR-12128 1 0 0
chr22:31278423|31278697 hsa-miR-4433b-3p 1 0 0
chr22:31278423|31278697 hsa-miR-4433a-3p 1 0 0
chr22:31278423|31278697 hsa-miR-6728-5p 1 0 0
chr22:31278423|31278697 hsa-miR-1227-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6089 1 0 0
chr22:31278423|31278697 hsa-miR-4722-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6890-5p 1 0 0
chr22:31278423|31278697 hsa-miR-197-5p 1 0 0
chr22:31278423|31278697 hsa-miR-3189-5p 1 0 0
chr22:31278423|31278697 hsa-miR-491-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6716-5p 1 0 0
chr22:31278423|31278697 hsa-miR-3151-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6732-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6798-5p 1 0 0
chr22:31278423|31278697 hsa-miR-5008-5p 1 0 0
chr22:31278423|31278697 hsa-miR-5006-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6786-5p 1 0 0
chr22:31278423|31278697 hsa-miR-5088-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6784-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4640-5p 1 0 0
chr22:31278423|31278697 hsa-miR-5004-3p 1 0 0
chr22:31278423|31278697 hsa-miR-1228-5p 1 0 0
chr22:31278423|31278697 hsa-miR-296-3p 1 0 0
chr22:31278423|31278697 hsa-miR-92b-5p 1 0 0
chr22:31278423|31278697 hsa-miR-194-3p 1 0 0
chr22:31278423|31278697 hsa-miR-6499-5p 1 0 0
chr22:31278423|31278697 hsa-miR-3675-5p 1 0 0
chr22:31278423|31278697 hsa-miR-1207-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4763-3p 1 0 0
chr22:31278423|31278697 hsa-miR-6816-5p 1 0 0
chr22:31278423|31278697 hsa-miR-5001-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6726-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6743-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6756-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6813-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6722-3p 1 0 0
chr22:31278423|31278697 hsa-miR-6879-5p 1 0 0
chr22:31278423|31278697 hsa-miR-3620-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4728-5p 1 0 0
chr22:31278423|31278697 hsa-miR-5196-5p 1 0 0
chr22:31278423|31278697 hsa-miR-10396b-5p 1 0 0
chr22:31278423|31278697 hsa-miR-1237-5p 1 0 0
chr22:31278423|31278697 hsa-miR-328-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4649-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4685-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4745-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6729-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6738-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6794-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6846-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6848-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4697-5p 1 0 0
chr22:31278423|31278697 hsa-miR-6885-5p 1 0 0
chr22:31278423|31278697 hsa-miR-1238-5p 1 0 0
chr22:31278423|31278697 hsa-miR-4758-5p 1 0 0
chr22:31278423|31278697 hsa-miR-3940-5p 1 0 0
chr22:31278423|31278697 hsa-miR-1914-3p 1 0 0
chr22:31278423|31278697 hsa-miR-6724-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:31278423|31278697
ORF Type ORF1
Protein Length 70
Nucleotide Length 213
Protein Sequence MAQPPAGGCSTASIAPLCPIPAVSRAVRASCGLAECLEAEQAIPITSPGGKWAQHQGNVSPQVLGPSYCL
Nucleotide Sequence CTGGCCCAGCCCCCTGCAGGGGGGTGTTCTACAGCCAGCATTGCCCCTCTGTGCCCCATTCCTGCTGTGAGCAGGGCCGTCCGGGCTTCCTGTGGATTGGCGGAATGTTTAGAAGCAGAACAAGCCATTCCTATTACCTCCCCAGGAGGCAAGTGGGCGCAGCACCAGGGAAATGTATCTCCACAGGTTCTGGGGCCTAGTTACTGTCTGTAA
CircID chr22:31278423|31278697
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MYLHRFWGLVTVCKSNTCLKAVKKKKT
Nucleotide Sequence ATGTATCTCCACAGGTTCTGGGGCCTAGTTACTGTCTGTAAATCCAATACTTGCCTGAAAGCTGTGAAGAAGAAAAAAACC
CircID chr22:31278423|31278697
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MWIGGMFRSRTSHSYYLPRRQVGAAPGKCISTGSGA
Nucleotide Sequence CTGTGGATTGGCGGAATGTTTAGAAGCAGAACAAGCCATTCCTATTACCTCCCCAGGAGGCAAGTGGGCGCAGCACCAGGGAAATGTATCTCCACAGGTTCTGGGGCCTAG
CircID chr22:31278423|31278697
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MPPGEVIGMACSASKHSANPQEARTALLTAGMGHRGAMLAVEHPPAGGWARAREVSP
Nucleotide Sequence TTGCCTCCTGGGGAGGTAATAGGAATGGCTTGTTCTGCTTCTAAACATTCCGCCAATCCACAGGAAGCCCGGACGGCCCTGCTCACAGCAGGAATGGGGCACAGAGGGGCAATGCTGGCTGTAGAACACCCCCCTGCAGGGGGCTGGGCCAGGGCTAGGGAGGTGAGTCCC
CircID chr22:31278423|31278697
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MLLNIPPIHRKPGRPCSQQEWGTEGQCWL
Nucleotide Sequence CTGCTTCTAAACATTCCGCCAATCCACAGGAAGCCCGGACGGCCCTGCTCACAGCAGGAATGGGGCACAGAGGGGCAATGCTGGCTGTAG
CircID chr22:31278423|31278697
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MDLQTVTRPQNLWRYISLVLRPLASWGGNRNGLFCF
Nucleotide Sequence TTGGATTTACAGACAGTAACTAGGCCCCAGAACCTGTGGAGATACATTTCCCTGGTGCTGCGCCCACTTGCCTCCTGGGGAGGTAATAGGAATGGCTTGTTCTGCTTCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab