CircRNA Information

General Information
circRNA Basic Information
CircID chr22:32110030|32110180
Strand +
CircType exon
Host Gene ENSG00000100170.8;
Algorism CIRI2;
Sequence GGTCACCAGGATGATGCCATTGACGTTCAACACTGTCCTCCACAAAGGCTTCTCAGAGGTGTCCGTCATCTTCATCTTCATGGCTTTCTCCTCTTCCTCAGTCATCTTGGGTGCACCGTGCTGCTCTAGCCCACAAAATAGGTCATAGGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:32110030|32110180 hsa-miR-15a-5p 0 0 1
chr22:32110030|32110180 hsa-miR-15a-3p 0 0 1
chr22:32110030|32110180 hsa-miR-192-5p 0 0 1
chr22:32110030|32110180 hsa-miR-192-3p 0 0 1
chr22:32110030|32110180 hsa-miR-215-5p 0 0 1
chr22:32110030|32110180 hsa-miR-215-3p 0 0 1
chr22:32110030|32110180 hsa-miR-15b-5p 0 0 1
chr22:32110030|32110180 hsa-miR-15b-3p 0 0 1
chr22:32110030|32110180 hsa-miR-195-5p 0 0 1
chr22:32110030|32110180 hsa-miR-195-3p 0 0 1
chr22:32110030|32110180 hsa-miR-424-5p 0 0 1
chr22:32110030|32110180 hsa-miR-424-3p 0 0 1
chr22:32110030|32110180 hsa-miR-497-5p 0 0 1
chr22:32110030|32110180 hsa-miR-497-3p 0 0 1
chr22:32110030|32110180 hsa-miR-653-5p 0 0 1
chr22:32110030|32110180 hsa-miR-653-3p 0 0 1
chr22:32110030|32110180 hsa-miR-765 1 1 1
chr22:32110030|32110180 hsa-miR-887-5p 0 0 1
chr22:32110030|32110180 hsa-miR-887-3p 0 0 1
chr22:32110030|32110180 hsa-miR-1253 0 0 1
chr22:32110030|32110180 hsa-miR-16 0 0 1
chr22:32110030|32110180 hsa-miR-1300 0 0 1
chr22:32110030|32110180 hsa-miR-762 1 0 0
chr22:32110030|32110180 hsa-miR-2278 0 1 0
chr22:32110030|32110180 hsa-miR-3125 1 0 0
chr22:32110030|32110180 hsa-miR-4322 1 1 0
chr22:32110030|32110180 hsa-miR-4265 1 0 0
chr22:32110030|32110180 hsa-miR-3921 0 1 0
chr22:32110030|32110180 hsa-miR-4439 0 1 0
chr22:32110030|32110180 hsa-miR-4478 1 0 0
chr22:32110030|32110180 hsa-miR-4489 1 0 0
chr22:32110030|32110180 hsa-miR-4492 1 0 0
chr22:32110030|32110180 hsa-miR-4498 1 0 0
chr22:32110030|32110180 hsa-miR-4499 1 0 0
chr22:32110030|32110180 hsa-miR-4533 1 0 0
chr22:32110030|32110180 hsa-miR-4642 0 1 0
chr22:32110030|32110180 hsa-miR-4656 1 0 0
chr22:32110030|32110180 hsa-miR-4674 1 0 0
chr22:32110030|32110180 hsa-miR-4689 1 1 0
chr22:32110030|32110180 hsa-miR-6069 1 0 0
chr22:32110030|32110180 hsa-miR-6081 1 0 0
chr22:32110030|32110180 hsa-miR-6127 1 0 0
chr22:32110030|32110180 hsa-miR-8060 0 1 0
chr22:32110030|32110180 hsa-miR-8085 1 0 0
chr22:32110030|32110180 hsa-miR-8089 1 0 0
chr22:32110030|32110180 hsa-miR-6734-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6765-5p 1 0 0
chr22:32110030|32110180 hsa-miR-671-5p 1 1 0
chr22:32110030|32110180 hsa-miR-6894-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6880-5p 1 0 0
chr22:32110030|32110180 hsa-miR-7847-3p 1 1 0
chr22:32110030|32110180 hsa-miR-4709-3p 1 0 0
chr22:32110030|32110180 hsa-miR-7154-3p 0 1 0
chr22:32110030|32110180 hsa-miR-7845-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6796-5p 1 0 0
chr22:32110030|32110180 hsa-miR-3150b-3p 0 1 0
chr22:32110030|32110180 hsa-miR-5008-5p 1 0 0
chr22:32110030|32110180 hsa-miR-1226-5p 1 0 0
chr22:32110030|32110180 hsa-miR-1228-5p 1 0 0
chr22:32110030|32110180 hsa-miR-3677-3p 1 0 0
chr22:32110030|32110180 hsa-miR-4446-3p 1 0 0
chr22:32110030|32110180 hsa-miR-6878-5p 1 1 0
chr22:32110030|32110180 hsa-miR-664b-5p 1 0 0
chr22:32110030|32110180 hsa-miR-5004-5p 0 1 0
chr22:32110030|32110180 hsa-miR-6761-5p 1 0 0
chr22:32110030|32110180 hsa-miR-5001-5p 1 0 0
chr22:32110030|32110180 hsa-miR-11181-3p 1 0 0
chr22:32110030|32110180 hsa-miR-1249-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6788-5p 1 0 0
chr22:32110030|32110180 hsa-miR-3620-5p 1 0 0
chr22:32110030|32110180 hsa-miR-4632-5p 1 1 0
chr22:32110030|32110180 hsa-miR-4649-5p 1 0 0
chr22:32110030|32110180 hsa-miR-4726-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6735-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6794-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6795-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6858-5p 1 0 0
chr22:32110030|32110180 hsa-miR-6887-5p 1 0 0
chr22:32110030|32110180 hsa-miR-4665-5p 1 0 0
chr22:32110030|32110180 hsa-miR-4700-5p 0 1 0
chr22:32110030|32110180 hsa-miR-6785-5p 1 0 0
chr22:32110030|32110180 hsa-miR-550a-5p 1 0 0
chr22:32110030|32110180 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:32110030|32110180
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MMPLTFNTVLHKGFSEVSVIFIFMAFSSSSVILGAPCCSSPQNRS
Nucleotide Sequence ATGATGCCATTGACGTTCAACACTGTCCTCCACAAAGGCTTCTCAGAGGTGTCCGTCATCTTCATCTTCATGGCTTTCTCCTCTTCCTCAGTCATCTTGGGTGCACCGTGCTGCTCTAGCCCACAAAATAGGTCATAG
CircID chr22:32110030|32110180
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MSSTKASQRCPSSSSSWLSPLPQSSWVHRAALAHKIGHR
Nucleotide Sequence CTGTCCTCCACAAAGGCTTCTCAGAGGTGTCCGTCATCTTCATCTTCATGGCTTTCTCCTCTTCCTCAGTCATCTTGGGTGCACCGTGCTGCTCTAGCCCACAAAATAGGTCATAGG
CircID chr22:32110030|32110180
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MTEEEEKAMKMKMTDTSEKPLWRTVLNVNGIILVT
Nucleotide Sequence ATGACTGAGGAAGAGGAGAAAGCCATGAAGATGAAGATGACGGACACCTCTGAGAAGCCTTTGTGGAGGACAGTGTTGAACGTCAATGGCATCATCCTGGTGACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab