CircRNA Information

General Information
circRNA Basic Information
CircID chr22:32498380|32498632
Strand +
CircType exon
Host Gene ENSG00000100225.16;
Algorism CIRI2;
Sequence CACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAAATGGAGCTCCAGAAATGAAATTACAAATCAATCACATGAATGACAGCCGGCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAACTGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:32498380|32498632 hsa-miR-204-5p 0 0 1
chr22:32498380|32498632 hsa-miR-204-3p 0 0 1
chr22:32498380|32498632 hsa-miR-211-5p 0 0 1
chr22:32498380|32498632 hsa-miR-211-3p 0 0 1
chr22:32498380|32498632 hsa-miR-214-5p 0 0 1
chr22:32498380|32498632 hsa-miR-214-3p 0 0 1
chr22:32498380|32498632 hsa-miR-136-5p 0 0 1
chr22:32498380|32498632 hsa-miR-136-3p 0 0 1
chr22:32498380|32498632 hsa-miR-328-5p 0 0 1
chr22:32498380|32498632 hsa-miR-328-3p 0 0 1
chr22:32498380|32498632 hsa-miR-505-5p 0 0 1
chr22:32498380|32498632 hsa-miR-505-3p 0 0 1
chr22:32498380|32498632 hsa-miR-579-5p 0 0 1
chr22:32498380|32498632 hsa-miR-579-3p 0 0 1
chr22:32498380|32498632 hsa-miR-608 1 0 1
chr22:32498380|32498632 hsa-miR-616-5p 0 0 1
chr22:32498380|32498632 hsa-miR-616-3p 0 0 1
chr22:32498380|32498632 hsa-miR-623 0 0 1
chr22:32498380|32498632 hsa-miR-640 0 0 1
chr22:32498380|32498632 hsa-miR-665 0 0 1
chr22:32498380|32498632 hsa-miR-1238-5p 0 0 1
chr22:32498380|32498632 hsa-miR-1238-3p 0 0 1
chr22:32498380|32498632 hsa-miR-1202 0 0 1
chr22:32498380|32498632 hsa-miR-1299 0 0 1
chr22:32498380|32498632 hsa-miR-769-5p 0 0 1
chr22:32498380|32498632 hsa-miR-145-5p 0 1 1
chr22:32498380|32498632 hsa-miR-516a-5p 0 0 1
chr22:32498380|32498632 hsa-miR-576-5p 0 0 1
chr22:32498380|32498632 hsa-miR-342-5p 1 1 1
chr22:32498380|32498632 hsa-miR-508-3p 0 0 1
chr22:32498380|32498632 hsa-miR-886-5p 0 0 1
chr22:32498380|32498632 hsa-miR-516b 0 0 1
chr22:32498380|32498632 hsa-miR-1826 0 0 1
chr22:32498380|32498632 hsa-miR-219-5p 0 0 1
chr22:32498380|32498632 hsa-miR-761 0 1 0
chr22:32498380|32498632 hsa-miR-3139 1 0 0
chr22:32498380|32498632 hsa-miR-4651 1 0 0
chr22:32498380|32498632 hsa-miR-5572 1 1 0
chr22:32498380|32498632 hsa-miR-5683 0 1 0
chr22:32498380|32498632 hsa-miR-7704 0 1 0
chr22:32498380|32498632 hsa-miR-8070 1 0 0
chr22:32498380|32498632 hsa-miR-10226 1 0 0
chr22:32498380|32498632 hsa-miR-11400 0 1 0
chr22:32498380|32498632 hsa-miR-4700-3p 0 1 0
chr22:32498380|32498632 hsa-miR-6747-5p 1 0 0
chr22:32498380|32498632 hsa-miR-3692-5p 1 0 0
chr22:32498380|32498632 hsa-miR-4786-5p 0 1 0
chr22:32498380|32498632 hsa-miR-6741-5p 1 0 0
chr22:32498380|32498632 hsa-miR-3189-5p 1 1 0
chr22:32498380|32498632 hsa-miR-6772-5p 1 0 0
chr22:32498380|32498632 hsa-miR-6829-5p 1 0 0
chr22:32498380|32498632 hsa-miR-5006-5p 0 1 0
chr22:32498380|32498632 hsa-miR-193b-5p 1 0 0
chr22:32498380|32498632 hsa-miR-3691-5p 1 0 0
chr22:32498380|32498632 hsa-miR-4715-5p 0 1 0
chr22:32498380|32498632 hsa-miR-3189-3p 0 1 0
chr22:32498380|32498632 hsa-miR-6837-3p 0 1 0
chr22:32498380|32498632 hsa-miR-6509-3p 0 1 0
chr22:32498380|32498632 hsa-miR-3156-3p 0 1 0
chr22:32498380|32498632 hsa-miR-6722-3p 0 1 0
chr22:32498380|32498632 hsa-miR-4755-5p 0 1 0
chr22:32498380|32498632 hsa-miR-1915-3p 0 1 0
chr22:32498380|32498632 hsa-miR-1909-3p 0 1 0
chr22:32498380|32498632 hsa-miR-4649-5p 0 1 0
chr22:32498380|32498632 hsa-miR-4685-5p 1 1 0
chr22:32498380|32498632 hsa-miR-6729-5p 0 1 0
chr22:32498380|32498632 hsa-miR-939-5p 1 0 0
chr22:32498380|32498632 hsa-miR-6792-3p 0 1 0
chr22:32498380|32498632 hsa-miR-6837-5p 0 1 0
chr22:32498380|32498632 hsa-miR-6500-5p 1 0 0
chr22:32498380|32498632 hsa-miR-5006-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:32498380|32498632
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MKLQINHMNDSRPSVGRPLLGLKGNLSLGPPRPGKMGLGPGSGPTGSKRGLSGGNW
Nucleotide Sequence ATGAAATTACAAATCAATCACATGAATGACAGCCGGCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAACTGG
CircID chr22:32498380|32498632
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MRPRFDPVGPLPGPNPILPGRGGPNDRFPFRPSRGRPTDGRLSFM
Nucleotide Sequence CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGTCATTCATGTGA
CircID chr22:32498380|32498632
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MICNFISGAPFVFVSKLQMSTPWGADLECYFLIV
Nucleotide Sequence TTGATTTGTAATTTCATTTCTGGAGCTCCATTTGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTG
CircID chr22:32498380|32498632
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MIQLAHFQDLTPSCQGEAAPMTDFPLDPAGVGQLMAGCHSCD
Nucleotide Sequence TTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGTCATTCATGTGATTGA
CircID chr22:32498380|32498632
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MELHLFLFLNYRCQLLGVLISSVIF
Nucleotide Sequence CTGGAGCTCCATTTGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab