CircRNA Information

General Information
circRNA Basic Information
CircID chr22:33583571|33583747
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCGGAAAGAAATTTAACAACGCCTATCCCATTCAGCTCCATCTTCTGCCCCTGAGCCCACTGAATAGGTCAGGGACATTGATTTTAAAATGGAATCTGTACACTATAAAATGAAAGTTCAATTTTCCAAATATAAGGACAGTTGGGTCCCCCCCATCCAGTATGAAGTGTGCTTCC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:33583571|33583747 hsa-miR-192-5p 0 0 1
chr22:33583571|33583747 hsa-miR-192-3p 0 0 1
chr22:33583571|33583747 hsa-miR-215-5p 0 0 1
chr22:33583571|33583747 hsa-miR-215-3p 0 0 1
chr22:33583571|33583747 hsa-miR-579-5p 0 0 1
chr22:33583571|33583747 hsa-miR-579-3p 0 0 1
chr22:33583571|33583747 hsa-miR-298 0 0 1
chr22:33583571|33583747 hsa-miR-1243 0 0 1
chr22:33583571|33583747 hsa-miR-1266-5p 0 0 1
chr22:33583571|33583747 hsa-miR-1266-3p 0 0 1
chr22:33583571|33583747 hsa-miR-486-3p 0 0 1
chr22:33583571|33583747 hsa-miR-125a-5p 0 0 1
chr22:33583571|33583747 hsa-miR-485-3p 0 0 1
chr22:33583571|33583747 hsa-miR-513a-3p 0 0 1
chr22:33583571|33583747 hsa-miR-125b 0 0 1
chr22:33583571|33583747 hsa-miR-24 0 0 1
chr22:33583571|33583747 hsa-miR-762 1 0 0
chr22:33583571|33583747 hsa-miR-920 1 0 0
chr22:33583571|33583747 hsa-miR-3132 1 0 0
chr22:33583571|33583747 hsa-miR-4296 1 0 0
chr22:33583571|33583747 hsa-miR-4322 1 0 0
chr22:33583571|33583747 hsa-miR-4265 1 0 0
chr22:33583571|33583747 hsa-miR-3649 1 0 0
chr22:33583571|33583747 hsa-miR-3945 1 0 0
chr22:33583571|33583747 hsa-miR-4437 1 0 0
chr22:33583571|33583747 hsa-miR-3135b 1 0 0
chr22:33583571|33583747 hsa-miR-4481 1 0 0
chr22:33583571|33583747 hsa-miR-4487 1 0 0
chr22:33583571|33583747 hsa-miR-2392 1 0 0
chr22:33583571|33583747 hsa-miR-4535 1 0 0
chr22:33583571|33583747 hsa-miR-1587 1 0 0
chr22:33583571|33583747 hsa-miR-4647 1 0 0
chr22:33583571|33583747 hsa-miR-4656 1 0 0
chr22:33583571|33583747 hsa-miR-4674 1 0 0
chr22:33583571|33583747 hsa-miR-4688 1 0 0
chr22:33583571|33583747 hsa-miR-4721 1 0 0
chr22:33583571|33583747 hsa-miR-5090 1 0 0
chr22:33583571|33583747 hsa-miR-5787 1 0 0
chr22:33583571|33583747 hsa-miR-6085 1 0 0
chr22:33583571|33583747 hsa-miR-6088 1 0 0
chr22:33583571|33583747 hsa-miR-7704 1 0 0
chr22:33583571|33583747 hsa-miR-8077 1 0 0
chr22:33583571|33583747 hsa-miR-8082 1 0 0
chr22:33583571|33583747 hsa-miR-12115 1 0 0
chr22:33583571|33583747 hsa-miR-12118 1 0 0
chr22:33583571|33583747 hsa-miR-12128 1 0 0
chr22:33583571|33583747 hsa-miR-6861-5p 1 0 0
chr22:33583571|33583747 hsa-miR-27a-5p 1 0 0
chr22:33583571|33583747 hsa-miR-1301-3p 1 0 0
chr22:33583571|33583747 hsa-miR-6727-5p 1 0 0
chr22:33583571|33583747 hsa-miR-197-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6742-5p 1 0 0
chr22:33583571|33583747 hsa-miR-3180-3p 1 0 0
chr22:33583571|33583747 hsa-miR-6748-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6793-5p 1 0 0
chr22:33583571|33583747 hsa-miR-185-3p 1 0 0
chr22:33583571|33583747 hsa-miR-6798-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6874-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6786-5p 1 0 0
chr22:33583571|33583747 hsa-miR-5088-5p 1 0 0
chr22:33583571|33583747 hsa-miR-7109-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6847-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6877-5p 1 0 0
chr22:33583571|33583747 hsa-miR-664b-5p 1 0 0
chr22:33583571|33583747 hsa-miR-423-5p 1 0 0
chr22:33583571|33583747 hsa-miR-3191-3p 1 0 0
chr22:33583571|33583747 hsa-miR-2355-3p 1 0 0
chr22:33583571|33583747 hsa-miR-6870-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6726-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6743-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6803-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6813-5p 1 0 0
chr22:33583571|33583747 hsa-miR-10401-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6751-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6779-5p 1 0 0
chr22:33583571|33583747 hsa-miR-3620-5p 1 0 0
chr22:33583571|33583747 hsa-miR-328-5p 1 0 0
chr22:33583571|33583747 hsa-miR-4725-3p 1 0 0
chr22:33583571|33583747 hsa-miR-4726-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6735-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6738-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6846-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6848-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6887-5p 1 0 0
chr22:33583571|33583747 hsa-miR-939-5p 1 0 0
chr22:33583571|33583747 hsa-miR-1238-5p 1 0 0
chr22:33583571|33583747 hsa-miR-4758-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6511a-5p 1 0 0
chr22:33583571|33583747 hsa-miR-30c-1-3p 1 0 0
chr22:33583571|33583747 hsa-miR-6773-5p 1 0 0
chr22:33583571|33583747 hsa-miR-10400-3p 1 0 0
chr22:33583571|33583747 hsa-miR-6884-5p 1 0 0
chr22:33583571|33583747 hsa-miR-6500-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:33583571|33583747
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MESVHYKMKVQFSKYKDSWVPPIQYEVCF
Nucleotide Sequence ATGGAATCTGTACACTATAAAATGAAAGTTCAATTTTCCAAATATAAGGACAGTTGGGTCCCCCCCATCCAGTATGAAGTGTGCTTC
CircID chr22:33583571|33583747
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MDGGDPTVLIFGKLNFHFIVYRFHFKINVPDLFSGLRGRRWS
Nucleotide Sequence CTGGATGGGGGGGACCCAACTGTCCTTATATTTGGAAAATTGAACTTTCATTTTATAGTGTACAGATTCCATTTTAAAATCAATGTCCCTGACCTATTCAGTGGGCTCAGGGGCAGAAGATGGAGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab