CircRNA Information

General Information
circRNA Basic Information
CircID chr22:36281750|36281995
Strand -
CircType exon
Host Gene ENSG00000100345.19;
Algorism CIRI2;
Sequence GGTGCAGGTAAACCACCCTCGGGCCCAGTCCTAGAGTAGACACAAGATCGCCTGGGAGGGCCGCTGGCCCCTCTAACGCTCTGGCTGTCAGACTTGGGACAAGTCCCTTAACCATTAAATATATTTGGTCCCCAAGAGTGTTGGGAGAAGCCACTGGAAGGCTGCTGGCCTTTCCAGCTTGACCCCGACAGCCTTGCTGTGGCAGAGGCAGGCTGTCCTCGGTAAAGGAGGGGAGGGGGCATTGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:36281750|36281995 hsa-miR-150-5p 0 0 1
chr22:36281750|36281995 hsa-miR-150-3p 0 0 1
chr22:36281750|36281995 hsa-miR-581 -6 1 1
chr22:36281750|36281995 hsa-miR-592 2 0 1
chr22:36281750|36281995 hsa-miR-596 -14 1 1
chr22:36281750|36281995 hsa-miR-599 0 0 1
chr22:36281750|36281995 hsa-miR-611 -11 1 1
chr22:36281750|36281995 hsa-miR-635 -11 0 1
chr22:36281750|36281995 hsa-miR-877-5p 0 0 1
chr22:36281750|36281995 hsa-miR-877-3p 0 0 1
chr22:36281750|36281995 hsa-miR-934 -7 1 1
chr22:36281750|36281995 hsa-miR-1293 0 0 1
chr22:36281750|36281995 hsa-miR-1825 -14 0 1
chr22:36281750|36281995 hsa-miR-145-5p -1 0 1
chr22:36281750|36281995 hsa-miR-296-5p -12 0 1
chr22:36281750|36281995 hsa-miR-532-3p -4 0 1
chr22:36281750|36281995 hsa-miR-199a-5p 7 0 1
chr22:36281750|36281995 hsa-miR-423-5p -3 0 1
chr22:36281750|36281995 hsa-miR-876-3p 0 1 1
chr22:36281750|36281995 hsa-miR-875-3p 3 0 1
chr22:36281750|36281995 hsa-miR-199b-5p 6 0 1
chr22:36281750|36281995 hsa-miR-299-5p 0 0 1
chr22:36281750|36281995 hsa-miR-365 0 0 1
chr22:36281750|36281995 hsa-miR-578 -15 1 0
chr22:36281750|36281995 hsa-miR-762 -15 1 0
chr22:36281750|36281995 hsa-miR-1913 -20 1 0
chr22:36281750|36281995 hsa-miR-3169 -5 1 0
chr22:36281750|36281995 hsa-miR-3660 -4 1 0
chr22:36281750|36281995 hsa-miR-4515 -6 1 0
chr22:36281750|36281995 hsa-miR-4526 -16 1 0
chr22:36281750|36281995 hsa-miR-3972 -6 1 0
chr22:36281750|36281995 hsa-miR-3978 -8 1 0
chr22:36281750|36281995 hsa-miR-12126 -18 1 0
chr22:36281750|36281995 hsa-miR-6747-3p -7 1 0
chr22:36281750|36281995 hsa-miR-6892-3p -10 1 0
chr22:36281750|36281995 hsa-miR-3691-3p -7 1 0
chr22:36281750|36281995 hsa-miR-6815-3p -9 1 0
chr22:36281750|36281995 hsa-miR-5001-3p -9 1 0
chr22:36281750|36281995 hsa-miR-3120-3p -1 1 0
chr22:36281750|36281995 hsa-miR-629-3p -4 1 0
chr22:36281750|36281995 hsa-miR-6887-3p -7 1 0
chr22:36281750|36281995 hsa-miR-6826-3p -8 1 0
chr22:36281750|36281995 hsa-miR-6768-3p -7 1 0
chr22:36281750|36281995 hsa-miR-3144-5p -15 1 0
chr22:36281750|36281995 hsa-miR-6813-5p -13 1 0
chr22:36281750|36281995 hsa-miR-4685-5p -12 1 0
chr22:36281750|36281995 hsa-miR-4726-5p -16 1 0
chr22:36281750|36281995 hsa-miR-365b-5p -13 1 0
chr22:36281750|36281995 hsa-miR-6773-5p -12 1 0
chr22:36281750|36281995 hsa-miR-6724-5p -19 1 0
chr22:36281750|36281995 hsa-miR-5581-5p -4 1 0
chr22:36281750|36281995 hsa-miR-330-5p -10 1 0
chr22:36281750|36281995 hsa-miR-6817-5p -7 1 0
chr22:36281750|36281995 hsa-miR-365a-3p -7 1 0
chr22:36281750|36281995 hsa-miR-365b-3p -7 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:36281750|36281995
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MVPKSVGRSHWKAAGLSSLTPTALLWQRQAVLGKGGEGAL
Nucleotide Sequence TTGGTCCCCAAGAGTGTTGGGAGAAGCCACTGGAAGGCTGCTGGCCTTTCCAGCTTGACCCCGACAGCCTTGCTGTGGCAGAGGCAGGCTGTCCTCGGTAAAGGAGGGGAGGGGGCATTG

CircID chr22:36281750|36281995
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MAVRLGTSPLTIKYIWSPRVLGEATGRLLAFPA
Nucleotide Sequence CTGGCTGTCAGACTTGGGACAAGTCCCTTAACCATTAAATATATTTGGTCCCCAAGAGTGTTGGGAGAAGCCACTGGAAGGCTGCTGGCCTTTCCAGCTTGA

CircID chr22:36281750|36281995
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MPPPLLYRGQPASATARLSGSSWKGQQPSSGFSQHSWGPNIFNG
Nucleotide Sequence ATGCCCCCTCCCCTCCTTTACCGAGGACAGCCTGCCTCTGCCACAGCAAGGCTGTCGGGGTCAAGCTGGAAAGGCCAGCAGCCTTCCAGTGGCTTCTCCCAACACTCTTGGGGACCAAATATATTTAATGGTTAA

CircID chr22:36281750|36281995
ORF Type ORF4
Protein Length 70
Nucleotide Length 210
Protein Sequence MPLPQQGCRGQAGKASSLPVASPNTLGDQIYLMVKGLVPSLTARALEGPAALPGDLVSTLGLGPRVVYLH
Nucleotide Sequence CTGCCTCTGCCACAGCAAGGCTGTCGGGGTCAAGCTGGAAAGGCCAGCAGCCTTCCAGTGGCTTCTCCCAACACTCTTGGGGACCAAATATATTTAATGGTTAAGGGACTTGTCCCAAGTCTGACAGCCAGAGCGTTAGAGGGGCCAGCGGCCCTCCCAGGCGATCTTGTGTCTACTCTAGGACTGGGCCCGAGGGTGGTTTACCTGCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites