CircRNA Information

General Information
circRNA Basic Information
CircID chr22:36281750|36282068
Strand -
CircType exon
Host Gene ENSG00000100345.19;
Algorism CIRI2;
Sequence GGTGCAGGTAAACCACCCTCGGGCCCAGTCCTAGAGTAGACACAAGATCGCCTGGGAGGGCCGCTGGCCCCTCTAACGCTCTGGCTGTCAGACTTGGGACAAGTCCCTTAACCATTAAATATATTTGGTCCCCAAGAGTGTTGGGAGAAGCCACTGGAAGGCTGCTGGCCTTTCCAGCTTGACCCCGACAGCCTTGCTGTGGCAGAGGCAGGCTGTCCTCGGTAAAGGAGGGGAGGGGGCATTGCACTTGAGACATTTTAGAATCAGGAGGGAGACAGCGGACAGTGGCGCTGCCTGGGACAGGGTGGGGAGGAATCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:36281750|36282068 hsa-miR-10a-5p 0 0 1
chr22:36281750|36282068 hsa-miR-10a-3p 0 0 1
chr22:36281750|36282068 hsa-miR-10b-5p 0 0 1
chr22:36281750|36282068 hsa-miR-10b-3p 0 0 1
chr22:36281750|36282068 hsa-miR-130a-5p 0 0 1
chr22:36281750|36282068 hsa-miR-130a-3p 0 0 1
chr22:36281750|36282068 hsa-miR-150-5p 0 0 1
chr22:36281750|36282068 hsa-miR-150-3p 0 0 1
chr22:36281750|36282068 hsa-miR-301a-5p 0 0 1
chr22:36281750|36282068 hsa-miR-301a-3p 0 0 1
chr22:36281750|36282068 hsa-miR-130b-5p 0 0 1
chr22:36281750|36282068 hsa-miR-130b-3p 0 0 1
chr22:36281750|36282068 hsa-miR-581 0 1 1
chr22:36281750|36282068 hsa-miR-592 0 0 1
chr22:36281750|36282068 hsa-miR-596 0 1 1
chr22:36281750|36282068 hsa-miR-599 0 0 1
chr22:36281750|36282068 hsa-miR-611 0 1 1
chr22:36281750|36282068 hsa-miR-626 0 0 1
chr22:36281750|36282068 hsa-miR-635 0 0 1
chr22:36281750|36282068 hsa-miR-454-5p 0 0 1
chr22:36281750|36282068 hsa-miR-454-3p 0 0 1
chr22:36281750|36282068 hsa-miR-877-5p 0 0 1
chr22:36281750|36282068 hsa-miR-877-3p 0 0 1
chr22:36281750|36282068 hsa-miR-301b-5p 0 0 1
chr22:36281750|36282068 hsa-miR-301b-3p 0 0 1
chr22:36281750|36282068 hsa-miR-934 0 1 1
chr22:36281750|36282068 hsa-miR-1293 0 0 1
chr22:36281750|36282068 hsa-miR-513c-5p 0 0 1
chr22:36281750|36282068 hsa-miR-513c-3p 0 0 1
chr22:36281750|36282068 hsa-miR-1825 1 0 1
chr22:36281750|36282068 hsa-miR-145-5p 0 0 1
chr22:36281750|36282068 hsa-miR-296-5p 1 0 1
chr22:36281750|36282068 hsa-miR-532-3p 0 0 1
chr22:36281750|36282068 hsa-miR-885-3p 0 0 1
chr22:36281750|36282068 hsa-miR-199a-5p 0 0 1
chr22:36281750|36282068 hsa-miR-339-5p 1 1 1
chr22:36281750|36282068 hsa-miR-423-5p 0 0 1
chr22:36281750|36282068 hsa-miR-876-3p 0 1 1
chr22:36281750|36282068 hsa-miR-875-3p 0 0 1
chr22:36281750|36282068 hsa-miR-199b-5p 0 0 1
chr22:36281750|36282068 hsa-miR-299-5p 0 0 1
chr22:36281750|36282068 hsa-miR-519b-3p 0 0 1
chr22:36281750|36282068 hsa-miR-519c-3p 0 0 1
chr22:36281750|36282068 hsa-miR-519a 0 0 1
chr22:36281750|36282068 hsa-miR-365 0 0 1
chr22:36281750|36282068 hsa-miR-449a 0 1 0
chr22:36281750|36282068 hsa-miR-578 1 1 0
chr22:36281750|36282068 hsa-miR-762 1 1 0
chr22:36281750|36282068 hsa-miR-1281 1 0 0
chr22:36281750|36282068 hsa-miR-1470 1 0 0
chr22:36281750|36282068 hsa-miR-1538 1 0 0
chr22:36281750|36282068 hsa-miR-1913 1 1 0
chr22:36281750|36282068 hsa-miR-1976 1 0 0
chr22:36281750|36282068 hsa-miR-718 1 0 0
chr22:36281750|36282068 hsa-miR-2861 1 0 0
chr22:36281750|36282068 hsa-miR-3169 0 1 0
chr22:36281750|36282068 hsa-miR-4295 0 1 0
chr22:36281750|36282068 hsa-miR-4290 1 0 0
chr22:36281750|36282068 hsa-miR-3655 1 0 0
chr22:36281750|36282068 hsa-miR-3660 0 1 0
chr22:36281750|36282068 hsa-miR-4469 0 1 0
chr22:36281750|36282068 hsa-miR-4515 0 1 0
chr22:36281750|36282068 hsa-miR-4526 1 1 0
chr22:36281750|36282068 hsa-miR-3972 0 1 0
chr22:36281750|36282068 hsa-miR-3978 0 1 0
chr22:36281750|36282068 hsa-miR-4656 1 0 0
chr22:36281750|36282068 hsa-miR-4673 0 1 0
chr22:36281750|36282068 hsa-miR-4692 0 1 0
chr22:36281750|36282068 hsa-miR-5193 1 1 0
chr22:36281750|36282068 hsa-miR-8089 1 0 0
chr22:36281750|36282068 hsa-miR-12126 1 1 0
chr22:36281750|36282068 hsa-miR-143-5p 1 1 0
chr22:36281750|36282068 hsa-miR-6749-3p 1 1 0
chr22:36281750|36282068 hsa-miR-6747-3p 0 1 0
chr22:36281750|36282068 hsa-miR-4726-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6836-3p 1 0 0
chr22:36281750|36282068 hsa-miR-4708-5p 1 0 0
chr22:36281750|36282068 hsa-miR-6892-3p 0 1 0
chr22:36281750|36282068 hsa-miR-145-3p 0 1 0
chr22:36281750|36282068 hsa-miR-6875-3p 1 1 0
chr22:36281750|36282068 hsa-miR-6727-5p 1 0 0
chr22:36281750|36282068 hsa-miR-8069 1 0 0
chr22:36281750|36282068 hsa-miR-3189-5p 1 0 0
chr22:36281750|36282068 hsa-miR-7110-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6787-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6845-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6882-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6788-3p 1 0 0
chr22:36281750|36282068 hsa-miR-3691-3p 0 1 0
chr22:36281750|36282068 hsa-miR-4436b-5p 1 0 0
chr22:36281750|36282068 hsa-miR-6815-3p 0 1 0
chr22:36281750|36282068 hsa-miR-6772-3p 1 0 0
chr22:36281750|36282068 hsa-miR-4793-5p 1 0 0
chr22:36281750|36282068 hsa-miR-542-5p 1 0 0
chr22:36281750|36282068 hsa-miR-5001-3p 0 1 0
chr22:36281750|36282068 hsa-miR-7113-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6749-5p 1 0 0
chr22:36281750|36282068 hsa-miR-7111-3p 1 1 0
chr22:36281750|36282068 hsa-miR-4667-3p 1 1 0
chr22:36281750|36282068 hsa-miR-6786-3p 1 0 0
chr22:36281750|36282068 hsa-miR-3120-3p 0 1 0
chr22:36281750|36282068 hsa-miR-1237-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6889-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6867-3p 0 1 0
chr22:36281750|36282068 hsa-miR-629-3p 0 1 0
chr22:36281750|36282068 hsa-miR-6887-3p 0 1 0
chr22:36281750|36282068 hsa-miR-6826-3p 0 1 0
chr22:36281750|36282068 hsa-miR-1914-5p 1 0 0
chr22:36281750|36282068 hsa-miR-6886-3p 1 0 0
chr22:36281750|36282068 hsa-miR-5088-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6760-3p 1 1 0
chr22:36281750|36282068 hsa-miR-6768-3p 0 1 0
chr22:36281750|36282068 hsa-miR-6748-3p 1 1 0
chr22:36281750|36282068 hsa-miR-3620-3p 0 1 0
chr22:36281750|36282068 hsa-miR-6779-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6734-3p 0 1 0
chr22:36281750|36282068 hsa-miR-3144-5p 1 1 0
chr22:36281750|36282068 hsa-miR-1249-3p 1 0 0
chr22:36281750|36282068 hsa-miR-371b-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6732-3p 1 0 0
chr22:36281750|36282068 hsa-miR-6812-5p 1 0 0
chr22:36281750|36282068 hsa-miR-6813-5p 0 1 0
chr22:36281750|36282068 hsa-miR-3127-3p 1 0 0
chr22:36281750|36282068 hsa-miR-4685-3p 1 0 0
chr22:36281750|36282068 hsa-miR-3620-5p 1 0 0
chr22:36281750|36282068 hsa-miR-328-5p 1 0 0
chr22:36281750|36282068 hsa-miR-4685-5p 0 1 0
chr22:36281750|36282068 hsa-miR-4726-5p 1 1 0
chr22:36281750|36282068 hsa-miR-34b-5p 0 1 0
chr22:36281750|36282068 hsa-miR-365b-5p 0 1 0
chr22:36281750|36282068 hsa-miR-6773-5p 0 1 0
chr22:36281750|36282068 hsa-miR-6724-5p 1 1 0
chr22:36281750|36282068 hsa-miR-10398-5p 1 0 0
chr22:36281750|36282068 hsa-miR-6756-3p 1 0 0
chr22:36281750|36282068 hsa-miR-3059-5p 1 0 0
chr22:36281750|36282068 hsa-miR-5581-5p 0 1 0
chr22:36281750|36282068 hsa-miR-330-5p 0 1 0
chr22:36281750|36282068 hsa-miR-449b-5p 0 1 0
chr22:36281750|36282068 hsa-miR-6817-5p 0 1 0
chr22:36281750|36282068 hsa-miR-6876-3p 1 1 0
chr22:36281750|36282068 hsa-miR-6766-3p 1 0 0
chr22:36281750|36282068 hsa-miR-365a-3p 0 1 0
chr22:36281750|36282068 hsa-miR-365b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:36281750|36282068
ORF Type ORF1
Protein Length 65
Nucleotide Length 195
Protein Sequence MVPKSVGRSHWKAAGLSSLTPTALLWQRQAVLGKGGEGALHLRHFRIRRETADSGAAWDRVGRNP
Nucleotide Sequence TTGGTCCCCAAGAGTGTTGGGAGAAGCCACTGGAAGGCTGCTGGCCTTTCCAGCTTGACCCCGACAGCCTTGCTGTGGCAGAGGCAGGCTGTCCTCGGTAAAGGAGGGGAGGGGGCATTGCACTTGAGACATTTTAGAATCAGGAGGGAGACAGCGGACAGTGGCGCTGCCTGGGACAGGGTGGGGAGGAATCCA
CircID chr22:36281750|36282068
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MAVRLGTSPLTIKYIWSPRVLGEATGRLLAFPA
Nucleotide Sequence CTGGCTGTCAGACTTGGGACAAGTCCCTTAACCATTAAATATATTTGGTCCCCAAGAGTGTTGGGAGAAGCCACTGGAAGGCTGCTGGCCTTTCCAGCTTGA
CircID chr22:36281750|36282068
ORF Type ORF3
Protein Length 85
Nucleotide Length 255
Protein Sequence MSQVQCPLPSFTEDSLPLPQQGCRGQAGKASSLPVASPNTLGDQIYLMVKGLVPSLTARALEGPAALPGDLVSTLGLGPRVVYLH
Nucleotide Sequence ATGTCTCAAGTGCAATGCCCCCTCCCCTCCTTTACCGAGGACAGCCTGCCTCTGCCACAGCAAGGCTGTCGGGGTCAAGCTGGAAAGGCCAGCAGCCTTCCAGTGGCTTCTCCCAACACTCTTGGGGACCAAATATATTTAATGGTTAAGGGACTTGTCCCAAGTCTGACAGCCAGAGCGTTAGAGGGGCCAGCGGCCCTCCCAGGCGATCTTGTGTCTACTCTAGGACTGGGCCCGAGGGTGGTTTACCTGCAC
CircID chr22:36281750|36282068
ORF Type ORF4
Protein Length 62
Nucleotide Length 189
Protein Sequence MSQAAPLSAVSLLILKCLKCNAPSPPLPRTACLCHSKAVGVKLERPAAFQWLLPTLLGTKYI
Nucleotide Sequence CTGTCCCAGGCAGCGCCACTGTCCGCTGTCTCCCTCCTGATTCTAAAATGTCTCAAGTGCAATGCCCCCTCCCCTCCTTTACCGAGGACAGCCTGCCTCTGCCACAGCAAGGCTGTCGGGGTCAAGCTGGAAAGGCCAGCAGCCTTCCAGTGGCTTCTCCCAACACTCTTGGGGACCAAATATATTTAA
CircID chr22:36281750|36282068
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MPPPLLYRGQPASATARLSGSSWKGQQPSSGFSQHSWGPNIFNG
Nucleotide Sequence ATGCCCCCTCCCCTCCTTTACCGAGGACAGCCTGCCTCTGCCACAGCAAGGCTGTCGGGGTCAAGCTGGAAAGGCCAGCAGCCTTCCAGTGGCTTCTCCCAACACTCTTGGGGACCAAATATATTTAATGGTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab