CircRNA Information

General Information
circRNA Basic Information
CircID chr22:36282538|36282712
Strand -
CircType exon
Host Gene ENSG00000100345.19;
Algorism CIRI2;
Sequence GGGGCGGAGGGCAGGAGGAGGCATGTTCACAGCAGTCCCAAGAAGGTGGGGAGAGGCGTGCTGCGGGGTCTGGGAAGGGGAGGCTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:36282538|36282712 hsa-miR-143-5p 0 0 1
chr22:36282538|36282712 hsa-miR-143-3p 0 0 1
chr22:36282538|36282712 hsa-miR-635 0 0 1
chr22:36282538|36282712 hsa-miR-942-5p 0 0 1
chr22:36282538|36282712 hsa-miR-942-3p 0 0 1
chr22:36282538|36282712 hsa-miR-1248 0 0 1
chr22:36282538|36282712 hsa-miR-1288-5p 0 0 1
chr22:36282538|36282712 hsa-miR-1288-3p 0 0 1
chr22:36282538|36282712 hsa-miR-1324 0 1 1
chr22:36282538|36282712 hsa-miR-1184 1 1 1
chr22:36282538|36282712 hsa-miR-1224-3p 0 0 1
chr22:36282538|36282712 hsa-miR-140-3p 0 0 1
chr22:36282538|36282712 hsa-miR-1302 0 0 1
chr22:36282538|36282712 hsa-miR-346 1 0 0
chr22:36282538|36282712 hsa-miR-762 1 1 0
chr22:36282538|36282712 hsa-miR-1203 1 0 0
chr22:36282538|36282712 hsa-miR-1281 1 0 0
chr22:36282538|36282712 hsa-miR-1470 0 1 0
chr22:36282538|36282712 hsa-miR-1976 0 1 0
chr22:36282538|36282712 hsa-miR-3134 0 1 0
chr22:36282538|36282712 hsa-miR-3137 1 1 0
chr22:36282538|36282712 hsa-miR-4254 1 0 0
chr22:36282538|36282712 hsa-miR-4656 1 1 0
chr22:36282538|36282712 hsa-miR-5193 0 1 0
chr22:36282538|36282712 hsa-miR-7974 1 0 0
chr22:36282538|36282712 hsa-miR-8052 0 1 0
chr22:36282538|36282712 hsa-miR-8073 1 0 0
chr22:36282538|36282712 hsa-miR-6749-3p 1 1 0
chr22:36282538|36282712 hsa-miR-4747-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6836-3p 1 1 0
chr22:36282538|36282712 hsa-miR-6720-5p 1 0 0
chr22:36282538|36282712 hsa-miR-766-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6892-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6881-3p 1 0 0
chr22:36282538|36282712 hsa-miR-7160-5p 1 1 0
chr22:36282538|36282712 hsa-miR-6875-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6845-3p 1 1 0
chr22:36282538|36282712 hsa-miR-4725-5p 1 0 0
chr22:36282538|36282712 hsa-miR-877-3p 0 1 0
chr22:36282538|36282712 hsa-miR-3126-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6882-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4436b-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6815-3p 1 0 0
chr22:36282538|36282712 hsa-miR-7109-3p 1 1 0
chr22:36282538|36282712 hsa-miR-1226-5p 1 0 0
chr22:36282538|36282712 hsa-miR-4763-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6763-3p 1 0 0
chr22:36282538|36282712 hsa-miR-3944-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4715-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6514-3p 1 0 0
chr22:36282538|36282712 hsa-miR-5001-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4783-5p 1 0 0
chr22:36282538|36282712 hsa-miR-4667-3p 0 1 0
chr22:36282538|36282712 hsa-miR-1237-3p 0 1 0
chr22:36282538|36282712 hsa-miR-3944-5p 1 0 0
chr22:36282538|36282712 hsa-miR-3180-5p 1 1 0
chr22:36282538|36282712 hsa-miR-6778-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6869-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6872-3p 1 0 0
chr22:36282538|36282712 hsa-miR-3151-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6859-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4649-3p 0 1 0
chr22:36282538|36282712 hsa-miR-6880-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6883-3p 1 0 0
chr22:36282538|36282712 hsa-miR-3620-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6734-3p 1 1 0
chr22:36282538|36282712 hsa-miR-6846-3p 1 0 0
chr22:36282538|36282712 hsa-miR-1249-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4520-2-3p 0 1 0
chr22:36282538|36282712 hsa-miR-6790-3p 1 0 0
chr22:36282538|36282712 hsa-miR-3162-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4520-3p 0 1 0
chr22:36282538|36282712 hsa-miR-16-5p 1 0 0
chr22:36282538|36282712 hsa-miR-4650-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6865-5p 0 1 0
chr22:36282538|36282712 hsa-miR-6756-5p 1 1 0
chr22:36282538|36282712 hsa-miR-6813-5p 1 0 0
chr22:36282538|36282712 hsa-miR-7107-5p 0 1 0
chr22:36282538|36282712 hsa-miR-6751-5p 1 0 0
chr22:36282538|36282712 hsa-miR-3127-3p 1 1 0
chr22:36282538|36282712 hsa-miR-4685-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4755-5p 1 0 0
chr22:36282538|36282712 hsa-miR-1915-3p 1 0 0
chr22:36282538|36282712 hsa-miR-4745-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6735-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6848-5p 1 0 0
chr22:36282538|36282712 hsa-miR-1271-3p 1 0 0
chr22:36282538|36282712 hsa-miR-7843-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6855-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6791-3p 1 1 0
chr22:36282538|36282712 hsa-miR-6877-3p 0 1 0
chr22:36282538|36282712 hsa-miR-2682-3p 1 1 0
chr22:36282538|36282712 hsa-miR-4722-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6893-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6756-3p 1 1 0
chr22:36282538|36282712 hsa-miR-10401-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6829-3p 1 1 0
chr22:36282538|36282712 hsa-miR-6837-5p 1 0 0
chr22:36282538|36282712 hsa-miR-10392-3p 1 0 0
chr22:36282538|36282712 hsa-miR-504-5p 1 0 0
chr22:36282538|36282712 hsa-miR-6511b-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6819-3p 1 1 0
chr22:36282538|36282712 hsa-miR-6823-3p 1 1 0
chr22:36282538|36282712 hsa-miR-6744-3p 1 0 0
chr22:36282538|36282712 hsa-miR-33b-3p 1 0 0
chr22:36282538|36282712 hsa-miR-6781-3p 1 1 0
chr22:36282538|36282712 hsa-miR-5006-3p 1 0 0
chr22:36282538|36282712 hsa-miR-7162-5p 1 0 0
chr22:36282538|36282712 hsa-miR-4524a-5p 1 0 0
chr22:36282538|36282712 hsa-miR-3913-5p 0 1 0
chr22:36282538|36282712 hsa-miR-99b-5p 1 0 0
chr22:36282538|36282712 hsa-miR-4524b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:36282538|36282712
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MRGLGRGGCGVCLSIHLRLQEKRLIRQVWPQPHPLCHL
Nucleotide Sequence CTGCGGGGTCTGGGAAGGGGAGGCTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCTA

CircID chr22:36282538|36282712
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MFTAVPRRWGEACCGVWEGEAVVSVCPSISGCRRRGLFGRFGLSPIRFAIY
Nucleotide Sequence ATGTTCACAGCAGTCCCAAGAAGGTGGGGAGAGGCGTGCTGCGGGGTCTGGGAAGGGGAGGCTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCTAC

CircID chr22:36282538|36282712
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MWCLSVHPSQAAGEEAYSAGLASAPSALPS
Nucleotide Sequence CTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCT

CircID chr22:36282538|36282712
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MAKRMGLRPNLPNKPLLLQPEMDGQTDTTASPSQTPQHASPHLLGTAVNMPPPALRP
Nucleotide Sequence ATGGCAAAGCGGATGGGGCTGAGGCCAAACCTGCCGAATAAGCCTCTTCTCCTGCAGCCTGAGATGGATGGACAGACAGACACCACAGCCTCCCCTTCCCAGACCCCGCAGCACGCCTCTCCCCACCTTCTTGGGACTGCTGTGAACATGCCTCCTCCTGCCCTCCGCCCC

CircID chr22:36282538|36282712
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MRWMDRQTPQPPLPRPRSTPLPTFLGLL
Nucleotide Sequence CTGAGATGGATGGACAGACAGACACCACAGCCTCCCCTTCCCAGACCCCGCAGCACGCCTCTCCCCACCTTCTTGGGACTGCTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites