CircRNA Information

General Information
circRNA Basic Information
CircID chr22:36282552|36282775
Strand +
CircType exon
Host Gene ENSG00000100345.19;
Algorism CIRI2;
Sequence CTGCCGTTTGTCGTGCCCCGCCGAATGGCCCGGAAAGGCGCCGGGGATGGCTCCGACGAAGAGGTAGATGGCAAAGCGGATGGGGCTGAGGCCAAACCTGCCGAATAAGCCTCTTCTCCTGCAGCCTGAGATGGATGGACAGACAGACACCACAGCCTCCCCTTCCCAGACCCCGCAGCACGCCTCTCCCCACCTTCTTGGGACTGCTGTGAACATGCCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:36282552|36282775 hsa-miR-27a-5p 0 0 1
chr22:36282552|36282775 hsa-miR-27a-3p 0 0 1
chr22:36282552|36282775 hsa-miR-27b-5p 0 0 1
chr22:36282552|36282775 hsa-miR-27b-3p 0 0 1
chr22:36282552|36282775 hsa-miR-484 0 0 1
chr22:36282552|36282775 hsa-miR-650 0 1 1
chr22:36282552|36282775 hsa-miR-657 0 1 1
chr22:36282552|36282775 hsa-miR-744-5p 0 0 1
chr22:36282552|36282775 hsa-miR-744-3p 0 0 1
chr22:36282552|36282775 hsa-miR-939-5p 0 0 1
chr22:36282552|36282775 hsa-miR-939-3p 0 0 1
chr22:36282552|36282775 hsa-miR-1180-5p 0 0 1
chr22:36282552|36282775 hsa-miR-1180-3p 0 0 1
chr22:36282552|36282775 hsa-miR-1205 0 0 1
chr22:36282552|36282775 hsa-miR-1286 0 0 1
chr22:36282552|36282775 hsa-miR-1253 0 0 1
chr22:36282552|36282775 hsa-miR-1266-5p 0 0 1
chr22:36282552|36282775 hsa-miR-1266-3p 0 0 1
chr22:36282552|36282775 hsa-miR-491-5p 0 0 1
chr22:36282552|36282775 hsa-miR-485-5p 0 0 1
chr22:36282552|36282775 hsa-miR-566 0 0 1
chr22:36282552|36282775 hsa-miR-513a-5p 0 0 1
chr22:36282552|36282775 hsa-miR-663 0 0 1
chr22:36282552|36282775 hsa-miR-595 1 0 0
chr22:36282552|36282775 hsa-miR-601 1 0 0
chr22:36282552|36282775 hsa-miR-604 1 0 0
chr22:36282552|36282775 hsa-miR-612 1 0 0
chr22:36282552|36282775 hsa-miR-663a 1 1 0
chr22:36282552|36282775 hsa-miR-658 1 0 0
chr22:36282552|36282775 hsa-miR-762 1 0 0
chr22:36282552|36282775 hsa-miR-760 1 0 0
chr22:36282552|36282775 hsa-miR-1231 1 0 0
chr22:36282552|36282775 hsa-miR-1268a 1 0 0
chr22:36282552|36282775 hsa-miR-1275 1 0 0
chr22:36282552|36282775 hsa-miR-1469 1 0 0
chr22:36282552|36282775 hsa-miR-2861 1 0 0
chr22:36282552|36282775 hsa-miR-3154 1 0 0
chr22:36282552|36282775 hsa-miR-3175 1 0 0
chr22:36282552|36282775 hsa-miR-3197 1 0 0
chr22:36282552|36282775 hsa-miR-4314 1 1 0
chr22:36282552|36282775 hsa-miR-4274 0 1 0
chr22:36282552|36282775 hsa-miR-3612 0 1 0
chr22:36282552|36282775 hsa-miR-1268b 1 0 0
chr22:36282552|36282775 hsa-miR-4447 1 0 0
chr22:36282552|36282775 hsa-miR-4466 1 0 0
chr22:36282552|36282775 hsa-miR-3689c 1 0 0
chr22:36282552|36282775 hsa-miR-4488 1 0 0
chr22:36282552|36282775 hsa-miR-4525 1 0 0
chr22:36282552|36282775 hsa-miR-4651 1 0 0
chr22:36282552|36282775 hsa-miR-4654 1 0 0
chr22:36282552|36282775 hsa-miR-4656 1 0 0
chr22:36282552|36282775 hsa-miR-4706 1 0 0
chr22:36282552|36282775 hsa-miR-4710 1 0 0
chr22:36282552|36282775 hsa-miR-4734 1 1 0
chr22:36282552|36282775 hsa-miR-4748 1 0 0
chr22:36282552|36282775 hsa-miR-5698 1 0 0
chr22:36282552|36282775 hsa-miR-5705 1 0 0
chr22:36282552|36282775 hsa-miR-5787 1 0 0
chr22:36282552|36282775 hsa-miR-6086 1 0 0
chr22:36282552|36282775 hsa-miR-6860 1 0 0
chr22:36282552|36282775 hsa-miR-7150 1 0 0
chr22:36282552|36282775 hsa-miR-7974 0 1 0
chr22:36282552|36282775 hsa-miR-8072 1 0 0
chr22:36282552|36282775 hsa-miR-8085 1 1 0
chr22:36282552|36282775 hsa-miR-8089 1 1 0
chr22:36282552|36282775 hsa-miR-12114 1 0 0
chr22:36282552|36282775 hsa-miR-92a-2-5p 1 0 0
chr22:36282552|36282775 hsa-miR-128-1-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6734-5p 1 0 0
chr22:36282552|36282775 hsa-miR-7155-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6747-5p 1 0 0
chr22:36282552|36282775 hsa-miR-124-5p 0 1 0
chr22:36282552|36282775 hsa-miR-3150a-3p 1 1 0
chr22:36282552|36282775 hsa-miR-6861-5p 1 0 0
chr22:36282552|36282775 hsa-miR-7106-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6825-5p 1 1 0
chr22:36282552|36282775 hsa-miR-4687-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6799-5p 1 0 0
chr22:36282552|36282775 hsa-miR-139-3p 1 0 0
chr22:36282552|36282775 hsa-miR-7114-5p 1 0 0
chr22:36282552|36282775 hsa-miR-3192-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4695-5p 0 1 0
chr22:36282552|36282775 hsa-miR-6746-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4722-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6721-5p 1 0 0
chr22:36282552|36282775 hsa-miR-197-5p 1 0 0
chr22:36282552|36282775 hsa-miR-3189-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6873-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6742-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6716-5p 1 0 0
chr22:36282552|36282775 hsa-miR-1292-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6793-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6796-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6829-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6732-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6805-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6798-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6782-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6821-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6786-5p 1 0 0
chr22:36282552|36282775 hsa-miR-7109-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6740-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6763-3p 0 1 0
chr22:36282552|36282775 hsa-miR-3944-3p 1 0 0
chr22:36282552|36282775 hsa-miR-204-3p 1 1 0
chr22:36282552|36282775 hsa-miR-193b-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4783-3p 1 0 0
chr22:36282552|36282775 hsa-miR-1908-5p 1 1 0
chr22:36282552|36282775 hsa-miR-1228-5p 1 0 0
chr22:36282552|36282775 hsa-miR-296-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6771-5p 1 0 0
chr22:36282552|36282775 hsa-miR-92b-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6878-3p 0 1 0
chr22:36282552|36282775 hsa-miR-3648 1 0 0
chr22:36282552|36282775 hsa-miR-149-3p 1 1 0
chr22:36282552|36282775 hsa-miR-193a-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6824-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6789-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6802-5p 1 0 0
chr22:36282552|36282775 hsa-miR-194-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6870-3p 0 1 0
chr22:36282552|36282775 hsa-miR-4707-5p 1 1 0
chr22:36282552|36282775 hsa-miR-7151-5p 0 1 0
chr22:36282552|36282775 hsa-miR-6729-3p 0 1 0
chr22:36282552|36282775 hsa-miR-1233-5p 1 0 0
chr22:36282552|36282775 hsa-miR-1273h-5p 1 0 0
chr22:36282552|36282775 hsa-miR-3689b-3p 1 0 0
chr22:36282552|36282775 hsa-miR-4763-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6769b-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6778-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6787-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6812-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6816-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6870-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6775-5p 1 1 0
chr22:36282552|36282775 hsa-miR-1343-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6726-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6737-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6752-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6756-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6813-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6842-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6851-5p 1 0 0
chr22:36282552|36282775 hsa-miR-7110-5p 1 0 0
chr22:36282552|36282775 hsa-miR-10401-5p 1 0 0
chr22:36282552|36282775 hsa-miR-11181-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6722-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6763-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6779-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6780a-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6797-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6879-5p 1 0 0
chr22:36282552|36282775 hsa-miR-7111-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4728-5p 1 0 0
chr22:36282552|36282775 hsa-miR-5196-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6780b-5p 1 0 0
chr22:36282552|36282775 hsa-miR-10396a-5p 1 1 0
chr22:36282552|36282775 hsa-miR-10396b-5p 0 1 0
chr22:36282552|36282775 hsa-miR-10526-3p 1 0 0
chr22:36282552|36282775 hsa-miR-328-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4649-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4725-3p 1 0 0
chr22:36282552|36282775 hsa-miR-4749-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6729-5p 1 0 0
chr22:36282552|36282775 hsa-miR-675-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6794-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6795-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6846-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6848-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6858-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6883-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6887-5p 1 0 0
chr22:36282552|36282775 hsa-miR-3187-5p 1 0 0
chr22:36282552|36282775 hsa-miR-10394-3p 1 0 0
chr22:36282552|36282775 hsa-miR-3085-5p 1 0 0
chr22:36282552|36282775 hsa-miR-30c-1-3p 1 0 0
chr22:36282552|36282775 hsa-miR-6731-5p 1 1 0
chr22:36282552|36282775 hsa-miR-1914-3p 1 0 0
chr22:36282552|36282775 hsa-miR-4700-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4646-5p 1 1 0
chr22:36282552|36282775 hsa-miR-4747-5p 1 1 0
chr22:36282552|36282775 hsa-miR-6891-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6785-5p 1 0 0
chr22:36282552|36282775 hsa-miR-4667-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6791-5p 1 0 0
chr22:36282552|36282775 hsa-miR-7107-3p 1 1 0
chr22:36282552|36282775 hsa-miR-4756-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6884-5p 1 0 0
chr22:36282552|36282775 hsa-miR-6876-3p 1 1 0
chr22:36282552|36282775 hsa-miR-2682-5p 1 0 0
chr22:36282552|36282775 hsa-miR-513c-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:36282552|36282775
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence LPFVVPRRMARKGAGDGSDEEVDGKADGAEAKPAE
Nucleotide Sequence CTGCCGTTTGTCGTGCCCCGCCGAATGGCCCGGAAAGGCGCCGGGGATGGCTCCGACGAAGAGGTAGATGGCAAAGCGGATGGGGCTGAGGCCAAACCTGCCGAATAA
CircID chr22:36282552|36282775
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MAKRMGLRPNLPNKPLLLQPEMDGQTDTTASPSQTPQHASPHLLGTAVNMPP
Nucleotide Sequence ATGGCAAAGCGGATGGGGCTGAGGCCAAACCTGCCGAATAAGCCTCTTCTCCTGCAGCCTGAGATGGATGGACAGACAGACACCACAGCCTCCCCTTCCCAGACCCCGCAGCACGCCTCTCCCCACCTTCTTGGGACTGCTGTGAACATGCCTCCT
CircID chr22:36282552|36282775
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MRWMDRQTPQPPLPRPRSTPLPTFLGLL
Nucleotide Sequence CTGAGATGGATGGACAGACAGACACCACAGCCTCCCCTTCCCAGACCCCGCAGCACGCCTCTCCCCACCTTCTTGGGACTGCTGTGA
CircID chr22:36282552|36282775
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MWCLSVHPSQAAGEEAYSAGLASAPSALPSTSSSEPSPAPFRAIRRGTTNG
Nucleotide Sequence CTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCTACCTCTTCGTCGGAGCCATCCCCGGCGCCTTTCCGGGCCATTCGGCGGGGCACGACAAACGGC
CircID chr22:36282552|36282775
ORF Type ORF5
Protein Length 59
Nucleotide Length 177
Protein Sequence MRGLGRGGCGVCLSIHLRLQEKRLIRQVWPQPHPLCHLPLRRSHPRRLSGPFGGARQTA
Nucleotide Sequence CTGCGGGGTCTGGGAAGGGGAGGCTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCTACCTCTTCGTCGGAGCCATCCCCGGCGCCTTTCCGGGCCATTCGGCGGGGCACGACAAACGGCA
CircID chr22:36282552|36282775
ORF Type ORF6
Protein Length 72
Nucleotide Length 216
Protein Sequence MFTAVPRRWGEACCGVWEGEAVVSVCPSISGCRRRGLFGRFGLSPIRFAIYLFVGAIPGAFPGHSAGHDKRQ
Nucleotide Sequence ATGTTCACAGCAGTCCCAAGAAGGTGGGGAGAGGCGTGCTGCGGGGTCTGGGAAGGGGAGGCTGTGGTGTCTGTCTGTCCATCCATCTCAGGCTGCAGGAGAAGAGGCTTATTCGGCAGGTTTGGCCTCAGCCCCATCCGCTTTGCCATCTACCTCTTCGTCGGAGCCATCCCCGGCGCCTTTCCGGGCCATTCGGCGGGGCACGACAAACGGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab