CircRNA Information

General Information
circRNA Basic Information
CircID chr22:36294131|36294298
Strand -
CircType exon
Host Gene ENSG00000100345.19;
Algorism CIRI2;
Sequence GCGCTCTCCCTCGTTGAACTTGACCTGCAGCTCCTGCAGCTGCGCCTCCACTTTCTTGCGCTTGTGCTCCGAGTCCCCTTTGCCCTGCAGCAGCACCTTCACCTCGTTGGCCAGCTCCCCCCGCTCGTTCTCCAGAGTCTGCTTTGCCTTCTCGAGGTTTGCTTTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:36294131|36294298 hsa-miR-18a-5p 0 0 1
chr22:36294131|36294298 hsa-miR-18a-3p 0 0 1
chr22:36294131|36294298 hsa-miR-95-5p 0 0 1
chr22:36294131|36294298 hsa-miR-95-3p 0 0 1
chr22:36294131|36294298 hsa-miR-18b-5p 0 0 1
chr22:36294131|36294298 hsa-miR-18b-3p 0 0 1
chr22:36294131|36294298 hsa-miR-493-5p 0 0 1
chr22:36294131|36294298 hsa-miR-493-3p 0 0 1
chr22:36294131|36294298 hsa-miR-558 0 0 1
chr22:36294131|36294298 hsa-miR-650 0 0 1
chr22:36294131|36294298 hsa-miR-657 0 0 1
chr22:36294131|36294298 hsa-miR-708-5p 0 0 1
chr22:36294131|36294298 hsa-miR-708-3p 0 0 1
chr22:36294131|36294298 hsa-miR-920 0 1 1
chr22:36294131|36294298 hsa-miR-939-5p 0 0 1
chr22:36294131|36294298 hsa-miR-939-3p 0 0 1
chr22:36294131|36294298 hsa-miR-1205 0 1 1
chr22:36294131|36294298 hsa-miR-1286 0 0 1
chr22:36294131|36294298 hsa-miR-330-3p 0 1 1
chr22:36294131|36294298 hsa-miR-28-5p 0 0 1
chr22:36294131|36294298 hsa-miR-516b 0 0 1
chr22:36294131|36294298 hsa-miR-571 0 1 0
chr22:36294131|36294298 hsa-miR-663a 1 0 0
chr22:36294131|36294298 hsa-miR-762 1 0 0
chr22:36294131|36294298 hsa-miR-760 1 0 0
chr22:36294131|36294298 hsa-miR-1183 1 0 0
chr22:36294131|36294298 hsa-miR-3147 1 0 0
chr22:36294131|36294298 hsa-miR-3154 1 0 0
chr22:36294131|36294298 hsa-miR-3197 0 1 0
chr22:36294131|36294298 hsa-miR-4300 0 1 0
chr22:36294131|36294298 hsa-miR-3621 1 0 0
chr22:36294131|36294298 hsa-miR-3665 1 0 0
chr22:36294131|36294298 hsa-miR-4443 0 1 0
chr22:36294131|36294298 hsa-miR-4450 1 0 0
chr22:36294131|36294298 hsa-miR-4466 1 0 0
chr22:36294131|36294298 hsa-miR-4487 1 1 0
chr22:36294131|36294298 hsa-miR-4656 1 0 0
chr22:36294131|36294298 hsa-miR-4674 1 0 0
chr22:36294131|36294298 hsa-miR-4706 1 0 0
chr22:36294131|36294298 hsa-miR-4734 1 1 0
chr22:36294131|36294298 hsa-miR-5090 1 0 0
chr22:36294131|36294298 hsa-miR-5698 1 1 0
chr22:36294131|36294298 hsa-miR-6081 1 0 0
chr22:36294131|36294298 hsa-miR-6090 1 0 0
chr22:36294131|36294298 hsa-miR-6132 1 1 0
chr22:36294131|36294298 hsa-miR-8052 1 0 0
chr22:36294131|36294298 hsa-miR-8072 1 0 0
chr22:36294131|36294298 hsa-miR-8089 1 0 0
chr22:36294131|36294298 hsa-miR-12114 0 1 0
chr22:36294131|36294298 hsa-miR-12115 0 1 0
chr22:36294131|36294298 hsa-miR-12117 0 1 0
chr22:36294131|36294298 hsa-miR-4433b-3p 1 0 0
chr22:36294131|36294298 hsa-miR-6734-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4731-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6857-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4687-3p 1 0 0
chr22:36294131|36294298 hsa-miR-6799-5p 1 0 0
chr22:36294131|36294298 hsa-miR-7847-3p 1 1 0
chr22:36294131|36294298 hsa-miR-6746-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4722-5p 0 1 0
chr22:36294131|36294298 hsa-miR-7154-3p 1 0 0
chr22:36294131|36294298 hsa-miR-6741-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6727-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6829-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6805-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6798-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6770-5p 0 1 0
chr22:36294131|36294298 hsa-miR-6760-5p 1 0 0
chr22:36294131|36294298 hsa-miR-2467-3p 1 0 0
chr22:36294131|36294298 hsa-miR-1226-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4738-3p 1 0 0
chr22:36294131|36294298 hsa-miR-3648 1 0 0
chr22:36294131|36294298 hsa-miR-4787-5p 1 0 0
chr22:36294131|36294298 hsa-miR-664b-5p 1 0 0
chr22:36294131|36294298 hsa-miR-3191-3p 1 0 0
chr22:36294131|36294298 hsa-miR-744-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4746-3p 1 0 0
chr22:36294131|36294298 hsa-miR-518c-5p 0 1 0
chr22:36294131|36294298 hsa-miR-3177-3p 1 0 0
chr22:36294131|36294298 hsa-miR-514a-5p 0 1 0
chr22:36294131|36294298 hsa-miR-6841-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4763-3p 1 0 0
chr22:36294131|36294298 hsa-miR-6787-5p 1 1 0
chr22:36294131|36294298 hsa-miR-6870-5p 0 1 0
chr22:36294131|36294298 hsa-miR-6775-5p 1 1 0
chr22:36294131|36294298 hsa-miR-1343-5p 1 1 0
chr22:36294131|36294298 hsa-miR-6726-5p 1 1 0
chr22:36294131|36294298 hsa-miR-6756-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6813-5p 1 1 0
chr22:36294131|36294298 hsa-miR-6851-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6722-3p 1 0 0
chr22:36294131|36294298 hsa-miR-6879-5p 1 0 0
chr22:36294131|36294298 hsa-miR-3620-5p 1 0 0
chr22:36294131|36294298 hsa-miR-5189-5p 1 0 0
chr22:36294131|36294298 hsa-miR-5196-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6836-5p 1 0 0
chr22:36294131|36294298 hsa-miR-10396a-5p 1 0 0
chr22:36294131|36294298 hsa-miR-10396b-5p 1 0 0
chr22:36294131|36294298 hsa-miR-10526-3p 1 1 0
chr22:36294131|36294298 hsa-miR-1909-3p 1 0 0
chr22:36294131|36294298 hsa-miR-328-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4632-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4649-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4749-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6735-5p 1 1 0
chr22:36294131|36294298 hsa-miR-6794-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6795-5p 1 1 0
chr22:36294131|36294298 hsa-miR-6846-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6848-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6887-5p 1 1 0
chr22:36294131|36294298 hsa-miR-4723-5p 0 1 0
chr22:36294131|36294298 hsa-miR-6831-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6885-5p 1 0 0
chr22:36294131|36294298 hsa-miR-365a-5p 1 0 0
chr22:36294131|36294298 hsa-miR-365b-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6511a-5p 1 0 0
chr22:36294131|36294298 hsa-miR-6511b-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4665-5p 1 0 0
chr22:36294131|36294298 hsa-miR-4716-3p 1 0 0
chr22:36294131|36294298 hsa-miR-3184-5p 1 0 0
chr22:36294131|36294298 hsa-miR-5591-5p 0 1 0
chr22:36294131|36294298 hsa-miR-3150b-5p 0 1 0
chr22:36294131|36294298 hsa-miR-10394-5p 0 1 0
chr22:36294131|36294298 hsa-miR-5195-3p 1 0 0
chr22:36294131|36294298 hsa-miR-10527-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:36294131|36294298
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MQLLQLRLHFLALVLRVPFALQQHLHLVGQLPPLVLQSLLCLLEVCFH
Nucleotide Sequence CTGCAGCTCCTGCAGCTGCGCCTCCACTTTCTTGCGCTTGTGCTCCGAGTCCCCTTTGCCCTGCAGCAGCACCTTCACCTCGTTGGCCAGCTCCCCCCGCTCGTTCTCCAGAGTCTGCTTTGCCTTCTCGAGGTTTGCTTTCAC
CircID chr22:36294131|36294298
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MNLTCSSCSCASTFLRLCSESPLPCSSTFTSLASSPRSFSRVCFAFSRFAF
Nucleotide Sequence TTGAACTTGACCTGCAGCTCCTGCAGCTGCGCCTCCACTTTCTTGCGCTTGTGCTCCGAGTCCCCTTTGCCCTGCAGCAGCACCTTCACCTCGTTGGCCAGCTCCCCCCGCTCGTTCTCCAGAGTCTGCTTTGCCTTCTCGAGGTTTGCTTTC
CircID chr22:36294131|36294298
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MENERGELANEVKVLLQGKGDSEHKRKKVEAQLQELQVKFNEGER
Nucleotide Sequence CTGGAGAACGAGCGGGGGGAGCTGGCCAACGAGGTGAAGGTGCTGCTGCAGGGCAAAGGGGACTCGGAGCACAAGCGCAAGAAAGTGGAGGCGCAGCTGCAGGAGCTGCAGGTCAAGTTCAACGAGGGAGAGCGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab