CircRNA Information

General Information
circRNA Basic Information
CircID chr22:36860995|36861107
Strand +
CircType exon
Host Gene ENSG00000100365.13;
Algorism CIRI2;
Sequence CTCTCACTTCCTCCAGCCACCCTGCGTCTCGTCTCAGCCTGTGGTCCTGGGAGTCCCCAGGAGCTGCCTTTGGGGAGGCTCAGGCCTGCTTCTCTCCAGTCTGGCAGAGGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:36860995|36861107 hsa-miR-185-5p 0 0 1
chr22:36860995|36861107 hsa-miR-185-3p 0 0 1
chr22:36860995|36861107 hsa-miR-765 0 0 1
chr22:36860995|36861107 hsa-miR-139-3p 1 0 1
chr22:36860995|36861107 hsa-miR-140-3p 0 1 1
chr22:36860995|36861107 hsa-miR-602 1 0 0
chr22:36860995|36861107 hsa-miR-637 0 1 0
chr22:36860995|36861107 hsa-miR-1293 1 0 0
chr22:36860995|36861107 hsa-miR-3197 1 0 0
chr22:36860995|36861107 hsa-miR-4306 0 1 0
chr22:36860995|36861107 hsa-miR-3652 0 1 0
chr22:36860995|36861107 hsa-miR-3918 1 1 0
chr22:36860995|36861107 hsa-miR-3929 0 1 0
chr22:36860995|36861107 hsa-miR-4430 0 1 0
chr22:36860995|36861107 hsa-miR-4438 1 1 0
chr22:36860995|36861107 hsa-miR-4449 1 0 0
chr22:36860995|36861107 hsa-miR-3135b 0 1 0
chr22:36860995|36861107 hsa-miR-4463 0 1 0
chr22:36860995|36861107 hsa-miR-4478 0 1 0
chr22:36860995|36861107 hsa-miR-4494 0 1 0
chr22:36860995|36861107 hsa-miR-4505 1 0 0
chr22:36860995|36861107 hsa-miR-4515 1 0 0
chr22:36860995|36861107 hsa-miR-4522 1 0 0
chr22:36860995|36861107 hsa-miR-4651 1 0 0
chr22:36860995|36861107 hsa-miR-4656 1 0 0
chr22:36860995|36861107 hsa-miR-4660 0 1 0
chr22:36860995|36861107 hsa-miR-4675 1 0 0
chr22:36860995|36861107 hsa-miR-5787 1 1 0
chr22:36860995|36861107 hsa-miR-6085 1 0 0
chr22:36860995|36861107 hsa-miR-6088 1 0 0
chr22:36860995|36861107 hsa-miR-6132 1 0 0
chr22:36860995|36861107 hsa-miR-8089 0 1 0
chr22:36860995|36861107 hsa-miR-6734-5p 1 0 0
chr22:36860995|36861107 hsa-miR-6840-3p 1 1 0
chr22:36860995|36861107 hsa-miR-6765-5p 1 1 0
chr22:36860995|36861107 hsa-miR-6782-5p 1 0 0
chr22:36860995|36861107 hsa-miR-6810-5p 0 1 0
chr22:36860995|36861107 hsa-miR-1343-3p 0 1 0
chr22:36860995|36861107 hsa-miR-6852-5p 0 1 0
chr22:36860995|36861107 hsa-miR-6886-5p 1 1 0
chr22:36860995|36861107 hsa-miR-664b-5p 1 0 0
chr22:36860995|36861107 hsa-miR-2114-3p 0 1 0
chr22:36860995|36861107 hsa-miR-1207-5p 1 1 0
chr22:36860995|36861107 hsa-miR-6743-5p 1 0 0
chr22:36860995|36861107 hsa-miR-6754-5p 1 0 0
chr22:36860995|36861107 hsa-miR-6756-5p 1 0 0
chr22:36860995|36861107 hsa-miR-1249-5p 0 1 0
chr22:36860995|36861107 hsa-miR-6722-3p 1 0 0
chr22:36860995|36861107 hsa-miR-6797-5p 0 1 0
chr22:36860995|36861107 hsa-miR-6808-5p 1 0 0
chr22:36860995|36861107 hsa-miR-186-3p 0 1 0
chr22:36860995|36861107 hsa-miR-4749-5p 1 0 0
chr22:36860995|36861107 hsa-miR-6831-5p 1 0 0
chr22:36860995|36861107 hsa-miR-365b-5p 0 1 0
chr22:36860995|36861107 hsa-miR-6877-3p 1 1 0
chr22:36860995|36861107 hsa-miR-7151-3p 1 0 0
chr22:36860995|36861107 hsa-miR-4646-5p 1 0 0
chr22:36860995|36861107 hsa-miR-4667-5p 0 1 0
chr22:36860995|36861107 hsa-miR-6751-3p 0 1 0
chr22:36860995|36861107 hsa-miR-6819-3p 1 1 0
chr22:36860995|36861107 hsa-miR-6823-3p 0 1 0
chr22:36860995|36861107 hsa-miR-6884-5p 1 0 0
chr22:36860995|36861107 hsa-miR-3619-5p 1 0 0
chr22:36860995|36861107 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:36860995|36861107
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MRLVSACGPGSPQELPLGRLRPASLQSGRG
Nucleotide Sequence CTGCGTCTCGTCTCAGCCTGTGGTCCTGGGAGTCCCCAGGAGCTGCCTTTGGGGAGGCTCAGGCCTGCTTCTCTCCAGTCTGGCAGAGGC
CircID chr22:36860995|36861107
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MWSWESPGAAFGEAQACFSPVWQRL
Nucleotide Sequence CTGTGGTCCTGGGAGTCCCCAGGAGCTGCCTTTGGGGAGGCTCAGGCCTGCTTCTCTCCAGTCTGGCAGAGGCTC
CircID chr22:36860995|36861107
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MPDWREAGLSLPKGSSWGLPGPQAETRRRVAGGSE
Nucleotide Sequence CTGCCAGACTGGAGAGAAGCAGGCCTGAGCCTCCCCAAAGGCAGCTCCTGGGGACTCCCAGGACCACAGGCTGAGACGAGACGCAGGGTGGCTGGAGGAAGTGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab