CircRNA Information

General Information
circRNA Basic Information
CircID chr22:37018380|37018483
Strand -
CircType exon
Host Gene ENSG00000128311.12;
Algorism CIRI2;
Sequence ACACGGAACATCCACCAGACCCGGGGAGCATAGAAGCTGCCCAGGTGTTCACCATCATACACCACCACGTGCGTGTGGTTGCTGATGCCCAGGCGGCCCACATA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:37018380|37018483 hsa-miR-545-5p 0 0 1
chr22:37018380|37018483 hsa-miR-545-3p 0 0 1
chr22:37018380|37018483 hsa-miR-612 1 1 1
chr22:37018380|37018483 hsa-miR-661 1 1 1
chr22:37018380|37018483 hsa-miR-1272 0 0 1
chr22:37018380|37018483 hsa-miR-1322 0 0 1
chr22:37018380|37018483 hsa-miR-299-3p 0 0 1
chr22:37018380|37018483 hsa-miR-876-3p 0 0 1
chr22:37018380|37018483 hsa-miR-323-5p 0 0 1
chr22:37018380|37018483 hsa-miR-1285 0 0 1
chr22:37018380|37018483 hsa-miR-608 1 0 0
chr22:37018380|37018483 hsa-miR-1268a 1 0 0
chr22:37018380|37018483 hsa-miR-3165 0 1 0
chr22:37018380|37018483 hsa-miR-4322 1 0 0
chr22:37018380|37018483 hsa-miR-4265 1 0 0
chr22:37018380|37018483 hsa-miR-1268b 1 0 0
chr22:37018380|37018483 hsa-miR-4657 1 0 0
chr22:37018380|37018483 hsa-miR-6860 0 1 0
chr22:37018380|37018483 hsa-miR-134-3p 1 1 0
chr22:37018380|37018483 hsa-miR-4665-3p 1 0 0
chr22:37018380|37018483 hsa-miR-4711-5p 0 1 0
chr22:37018380|37018483 hsa-miR-939-3p 0 1 0
chr22:37018380|37018483 hsa-miR-6877-5p 1 0 0
chr22:37018380|37018483 hsa-miR-4707-5p 1 0 0
chr22:37018380|37018483 hsa-miR-654-5p 1 0 0
chr22:37018380|37018483 hsa-miR-3617-3p 0 1 0
chr22:37018380|37018483 hsa-miR-6803-5p 1 0 0
chr22:37018380|37018483 hsa-miR-10401-5p 1 0 0
chr22:37018380|37018483 hsa-miR-3620-5p 1 0 0
chr22:37018380|37018483 hsa-miR-5189-5p 0 1 0
chr22:37018380|37018483 hsa-miR-4632-5p 1 0 0
chr22:37018380|37018483 hsa-miR-3187-5p 0 1 0
chr22:37018380|37018483 hsa-miR-939-5p 1 0 0
chr22:37018380|37018483 hsa-miR-1285-3p 0 1 0
chr22:37018380|37018483 hsa-miR-5008-3p 1 1 0
chr22:37018380|37018483 hsa-miR-6724-5p 1 0 0
chr22:37018380|37018483 hsa-miR-6791-5p 1 0 0
chr22:37018380|37018483 hsa-miR-6764-5p 1 0 0
chr22:37018380|37018483 hsa-miR-7159-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:37018380|37018483
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MGISNHTHVVVYDGEHLGSFYAPRVWWMFR
Nucleotide Sequence CTGGGCATCAGCAACCACACGCACGTGGTGGTGTATGATGGTGAACACCTGGGCAGCTTCTATGCTCCCCGGGTCTGGTGGATGTTCCGT

CircID chr22:37018380|37018483
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MWAAWASATTRTWWCMMVNTWAASMLPGSGGCSV
Nucleotide Sequence ATGTGGGCCGCCTGGGCATCAGCAACCACACGCACGTGGTGGTGTATGATGGTGAACACCTGGGCAGCTTCTATGCTCCCCGGGTCTGGTGGATGTTCCGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites