CircRNA Information

General Information
circRNA Basic Information
CircID chr22:37486128|37486321
Strand -
CircType exon
Host Gene ENSG00000100060.16;
Algorism CIRI2;
Sequence AGGAGGGTGAGGAGGGCTCCAGCCAGGCCCCGCGGGAGCCGGCACTGCATTGGTTGGCCCTGGGACCCCAGACAGCTCAGCCCCCAAATCCCAACCAGACAGGGAGGGGAAGCTGGTCAGGCAGGGGCTCCAGCAGAGGCAAAAGTCTGGCAGGCATCAGGGGCTGGCAAGGAGGGAAGAGGTAGGAGCTGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:37486128|37486321 hsa-miR-558 0 0 1
chr22:37486128|37486321 hsa-miR-626 0 0 1
chr22:37486128|37486321 hsa-miR-637 0 0 1
chr22:37486128|37486321 hsa-miR-744-5p 0 0 1
chr22:37486128|37486321 hsa-miR-744-3p 0 0 1
chr22:37486128|37486321 hsa-miR-1231 0 0 1
chr22:37486128|37486321 hsa-miR-1236-5p 0 0 1
chr22:37486128|37486321 hsa-miR-1236-3p 0 0 1
chr22:37486128|37486321 hsa-miR-1202 0 0 1
chr22:37486128|37486321 hsa-miR-1287-5p 0 0 1
chr22:37486128|37486321 hsa-miR-1287-3p 0 0 1
chr22:37486128|37486321 hsa-miR-1275 0 0 1
chr22:37486128|37486321 hsa-miR-1225-3p 1 1 1
chr22:37486128|37486321 hsa-miR-615-5p 1 1 1
chr22:37486128|37486321 hsa-miR-339-5p 0 0 1
chr22:37486128|37486321 hsa-miR-502-5p 0 1 1
chr22:37486128|37486321 hsa-miR-769-3p 0 0 1
chr22:37486128|37486321 hsa-miR-450b-3p 0 0 1
chr22:37486128|37486321 hsa-miR-1274a 0 0 1
chr22:37486128|37486321 hsa-miR-1233 0 0 1
chr22:37486128|37486321 hsa-miR-642 0 0 1
chr22:37486128|37486321 hsa-miR-1274b 0 0 1
chr22:37486128|37486321 hsa-miR-1201 0 0 1
chr22:37486128|37486321 hsa-miR-371-3p 0 0 1
chr22:37486128|37486321 hsa-miR-346 1 0 0
chr22:37486128|37486321 hsa-miR-762 1 0 0
chr22:37486128|37486321 hsa-miR-1248 1 0 0
chr22:37486128|37486321 hsa-miR-1260a 1 0 0
chr22:37486128|37486321 hsa-miR-1281 1 0 0
chr22:37486128|37486321 hsa-miR-1470 1 0 0
chr22:37486128|37486321 hsa-miR-1976 1 0 0
chr22:37486128|37486321 hsa-miR-2861 0 1 0
chr22:37486128|37486321 hsa-miR-4254 0 1 0
chr22:37486128|37486321 hsa-miR-4281 1 0 0
chr22:37486128|37486321 hsa-miR-4290 0 1 0
chr22:37486128|37486321 hsa-miR-3685 1 0 0
chr22:37486128|37486321 hsa-miR-3918 0 1 0
chr22:37486128|37486321 hsa-miR-4449 1 0 0
chr22:37486128|37486321 hsa-miR-3135b 0 1 0
chr22:37486128|37486321 hsa-miR-3972 1 1 0
chr22:37486128|37486321 hsa-miR-4656 0 1 0
chr22:37486128|37486321 hsa-miR-4663 0 1 0
chr22:37486128|37486321 hsa-miR-4682 1 0 0
chr22:37486128|37486321 hsa-miR-4741 1 0 0
chr22:37486128|37486321 hsa-miR-5193 0 1 0
chr22:37486128|37486321 hsa-miR-5100 1 0 0
chr22:37486128|37486321 hsa-miR-5572 0 1 0
chr22:37486128|37486321 hsa-miR-5690 1 0 0
chr22:37486128|37486321 hsa-miR-9898 1 0 0
chr22:37486128|37486321 hsa-miR-143-5p 0 1 0
chr22:37486128|37486321 hsa-miR-92a-1-5p 0 1 0
chr22:37486128|37486321 hsa-miR-6840-3p 1 0 0
chr22:37486128|37486321 hsa-miR-7155-5p 1 1 0
chr22:37486128|37486321 hsa-miR-6747-3p 1 0 0
chr22:37486128|37486321 hsa-miR-1233-3p 0 1 0
chr22:37486128|37486321 hsa-miR-766-3p 1 0 0
chr22:37486128|37486321 hsa-miR-210-5p 0 1 0
chr22:37486128|37486321 hsa-miR-6881-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6875-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6842-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6787-3p 1 1 0
chr22:37486128|37486321 hsa-miR-6845-3p 1 0 0
chr22:37486128|37486321 hsa-miR-3180-3p 1 0 0
chr22:37486128|37486321 hsa-miR-877-3p 1 1 0
chr22:37486128|37486321 hsa-miR-185-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6728-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6882-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6740-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6858-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6786-5p 1 0 0
chr22:37486128|37486321 hsa-miR-4763-5p 1 0 0
chr22:37486128|37486321 hsa-miR-1909-5p 1 0 0
chr22:37486128|37486321 hsa-miR-6894-3p 0 1 0
chr22:37486128|37486321 hsa-miR-7113-3p 1 1 0
chr22:37486128|37486321 hsa-miR-6809-3p 1 0 0
chr22:37486128|37486321 hsa-miR-7111-3p 1 0 0
chr22:37486128|37486321 hsa-miR-4667-3p 1 1 0
chr22:37486128|37486321 hsa-miR-4446-5p 1 0 0
chr22:37486128|37486321 hsa-miR-378a-5p 1 0 0
chr22:37486128|37486321 hsa-miR-6736-3p 1 1 0
chr22:37486128|37486321 hsa-miR-6769a-3p 0 1 0
chr22:37486128|37486321 hsa-miR-593-3p 1 1 0
chr22:37486128|37486321 hsa-miR-6895-5p 0 1 0
chr22:37486128|37486321 hsa-miR-6811-3p 1 0 0
chr22:37486128|37486321 hsa-miR-4687-5p 0 1 0
chr22:37486128|37486321 hsa-miR-584-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6804-3p 1 0 0
chr22:37486128|37486321 hsa-miR-1238-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6887-3p 0 1 0
chr22:37486128|37486321 hsa-miR-1224-3p 1 0 0
chr22:37486128|37486321 hsa-miR-4746-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6752-3p 0 1 0
chr22:37486128|37486321 hsa-miR-371a-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6826-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6886-3p 1 1 0
chr22:37486128|37486321 hsa-miR-5088-3p 1 1 0
chr22:37486128|37486321 hsa-miR-5189-3p 0 1 0
chr22:37486128|37486321 hsa-miR-4746-5p 1 0 0
chr22:37486128|37486321 hsa-miR-4649-3p 1 0 0
chr22:37486128|37486321 hsa-miR-3124-3p 1 0 0
chr22:37486128|37486321 hsa-miR-5584-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6800-3p 1 0 0
chr22:37486128|37486321 hsa-miR-3152-5p 0 1 0
chr22:37486128|37486321 hsa-miR-6803-5p 1 0 0
chr22:37486128|37486321 hsa-miR-6813-5p 1 0 0
chr22:37486128|37486321 hsa-miR-3127-3p 1 0 0
chr22:37486128|37486321 hsa-miR-320a-5p 1 0 0
chr22:37486128|37486321 hsa-miR-4685-3p 1 0 0
chr22:37486128|37486321 hsa-miR-1915-3p 1 1 0
chr22:37486128|37486321 hsa-miR-3620-5p 1 1 0
chr22:37486128|37486321 hsa-miR-10396a-5p 0 1 0
chr22:37486128|37486321 hsa-miR-4685-5p 1 0 0
chr22:37486128|37486321 hsa-miR-4726-5p 1 0 0
chr22:37486128|37486321 hsa-miR-6846-5p 1 0 0
chr22:37486128|37486321 hsa-miR-6848-5p 1 1 0
chr22:37486128|37486321 hsa-miR-6855-5p 0 1 0
chr22:37486128|37486321 hsa-miR-2682-3p 1 0 0
chr22:37486128|37486321 hsa-miR-4722-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6727-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6756-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6801-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6810-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6829-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6837-5p 0 1 0
chr22:37486128|37486321 hsa-miR-10392-3p 1 0 0
chr22:37486128|37486321 hsa-miR-11181-5p 0 1 0
chr22:37486128|37486321 hsa-miR-6876-3p 0 1 0
chr22:37486128|37486321 hsa-miR-6781-3p 1 0 0
chr22:37486128|37486321 hsa-miR-6764-5p 0 1 0
chr22:37486128|37486321 hsa-miR-4690-3p 1 0 0
chr22:37486128|37486321 hsa-miR-217-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:37486128|37486321
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MVGPGTPDSSAPKSQPDREGKLVRQGLQQRQKSGRHQGLARREEVGAE
Nucleotide Sequence TTGGTTGGCCCTGGGACCCCAGACAGCTCAGCCCCCAAATCCCAACCAGACAGGGAGGGGAAGCTGGTCAGGCAGGGGCTCCAGCAGAGGCAAAAGTCTGGCAGGCATCAGGGGCTGGCAAGGAGGGAAGAGGTAGGAGCTGAG
CircID chr22:37486128|37486321
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MHWLALGPQTAQPPNPNQTGRGSWSGRGSSRGKSLAGIRGWQGGKR
Nucleotide Sequence CTGCATTGGTTGGCCCTGGGACCCCAGACAGCTCAGCCCCCAAATCCCAACCAGACAGGGAGGGGAAGCTGGTCAGGCAGGGGCTCCAGCAGAGGCAAAAGTCTGGCAGGCATCAGGGGCTGGCAAGGAGGGAAGAGGTAG
CircID chr22:37486128|37486321
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MVGIWGLSCLGSQGQPMQCRLPRGLAGALLTL
Nucleotide Sequence CTGGTTGGGATTTGGGGGCTGAGCTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCGGGGCCTGGCTGGAGCCCTCCTCACCCTC
CircID chr22:37486128|37486321
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MMPARLLPLLEPLPDQLPLPVWLGFGG
Nucleotide Sequence CTGATGCCTGCCAGACTTTTGCCTCTGCTGGAGCCCCTGCCTGACCAGCTTCCCCTCCCTGTCTGGTTGGGATTTGGGGGCTGA
CircID chr22:37486128|37486321
ORF Type ORF5
Protein Length 51
Nucleotide Length 153
Protein Sequence MPDFCLCWSPCLTSFPSLSGWDLGAELSGVPGPTNAVPAPAGPGWSPPHPP
Nucleotide Sequence CTGCCAGACTTTTGCCTCTGCTGGAGCCCCTGCCTGACCAGCTTCCCCTCCCTGTCTGGTTGGGATTTGGGGGCTGAGCTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCGGGGCCTGGCTGGAGCCCTCCTCACCCTCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab