CircRNA Information

General Information
circRNA Basic Information
CircID chr22:37774112|37774319
Strand -
CircType exon
Host Gene ENSG00000100101.14;
Algorism CIRI2;
Sequence ACTTTATACTTTAAAAAAAAAAAAAAAAAGCAATTCCTGGTGGCTGTGTGCCTCCAACCCTGGTCCCCCTCTGTCTCCAGCCACCCTCTGCTTGGGCTTCTGAGCTGGTGGCCCTGGCCCAGAGGTCTGGCGGAGGCCCAGGCAGCAGCCATGGCGGGGTGTCTCTACAGGGGAGAGGCGGGAGCCTGCCACCCTCTTCCTGCCCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:37774112|37774319 hsa-miR-340-5p 0 0 1
chr22:37774112|37774319 hsa-miR-340-3p 0 0 1
chr22:37774112|37774319 hsa-miR-326 0 1 1
chr22:37774112|37774319 hsa-miR-484 0 1 1
chr22:37774112|37774319 hsa-miR-559 0 0 1
chr22:37774112|37774319 hsa-miR-604 0 0 1
chr22:37774112|37774319 hsa-miR-612 0 0 1
chr22:37774112|37774319 hsa-miR-647 0 0 1
chr22:37774112|37774319 hsa-miR-650 1 1 1
chr22:37774112|37774319 hsa-miR-661 0 1 1
chr22:37774112|37774319 hsa-miR-1226-5p 0 0 1
chr22:37774112|37774319 hsa-miR-1226-3p 0 0 1
chr22:37774112|37774319 hsa-miR-548j-5p 0 0 1
chr22:37774112|37774319 hsa-miR-548j-3p 0 0 1
chr22:37774112|37774319 hsa-miR-548k 0 0 1
chr22:37774112|37774319 hsa-miR-548l 0 0 1
chr22:37774112|37774319 hsa-miR-302f 0 0 1
chr22:37774112|37774319 hsa-miR-296-3p 1 1 1
chr22:37774112|37774319 hsa-miR-142-5p 0 0 1
chr22:37774112|37774319 hsa-miR-331-3p 0 0 1
chr22:37774112|37774319 hsa-miR-1207-5p 0 1 1
chr22:37774112|37774319 hsa-miR-330-5p 0 1 1
chr22:37774112|37774319 hsa-miR-548b-5p 0 0 1
chr22:37774112|37774319 hsa-miR-548d-5p 0 0 1
chr22:37774112|37774319 hsa-miR-548c-5p 0 0 1
chr22:37774112|37774319 hsa-miR-548a-5p 0 0 1
chr22:37774112|37774319 hsa-miR-548i 0 0 1
chr22:37774112|37774319 hsa-miR-1285 0 0 1
chr22:37774112|37774319 hsa-miR-1254 0 0 1
chr22:37774112|37774319 hsa-miR-768-5p 0 0 1
chr22:37774112|37774319 hsa-miR-548h 0 0 1
chr22:37774112|37774319 hsa-miR-608 1 0 0
chr22:37774112|37774319 hsa-miR-657 0 1 0
chr22:37774112|37774319 hsa-miR-1293 1 0 0
chr22:37774112|37774319 hsa-miR-3147 0 1 0
chr22:37774112|37774319 hsa-miR-3154 1 0 0
chr22:37774112|37774319 hsa-miR-3197 1 0 0
chr22:37774112|37774319 hsa-miR-4298 1 0 0
chr22:37774112|37774319 hsa-miR-4267 0 1 0
chr22:37774112|37774319 hsa-miR-3652 1 1 0
chr22:37774112|37774319 hsa-miR-3918 0 1 0
chr22:37774112|37774319 hsa-miR-4430 0 1 0
chr22:37774112|37774319 hsa-miR-4462 1 0 0
chr22:37774112|37774319 hsa-miR-4463 1 0 0
chr22:37774112|37774319 hsa-miR-4654 1 0 0
chr22:37774112|37774319 hsa-miR-5787 1 0 0
chr22:37774112|37774319 hsa-miR-6084 0 1 0
chr22:37774112|37774319 hsa-miR-6133 1 0 0
chr22:37774112|37774319 hsa-miR-8089 1 1 0
chr22:37774112|37774319 hsa-miR-134-5p 1 0 0
chr22:37774112|37774319 hsa-miR-671-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6894-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6804-5p 0 1 0
chr22:37774112|37774319 hsa-miR-139-3p 1 0 0
chr22:37774112|37774319 hsa-miR-4786-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4695-5p 1 0 0
chr22:37774112|37774319 hsa-miR-769-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4722-5p 0 1 0
chr22:37774112|37774319 hsa-miR-6762-3p 1 1 0
chr22:37774112|37774319 hsa-miR-6727-5p 1 0 0
chr22:37774112|37774319 hsa-miR-8069 1 0 0
chr22:37774112|37774319 hsa-miR-7845-5p 1 0 0
chr22:37774112|37774319 hsa-miR-3180-3p 1 0 0
chr22:37774112|37774319 hsa-miR-6732-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6805-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6798-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6760-5p 0 1 0
chr22:37774112|37774319 hsa-miR-2467-3p 1 0 0
chr22:37774112|37774319 hsa-miR-6782-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6810-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6882-3p 1 1 0
chr22:37774112|37774319 hsa-miR-6786-5p 1 0 0
chr22:37774112|37774319 hsa-miR-939-3p 0 1 0
chr22:37774112|37774319 hsa-miR-542-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4640-5p 1 1 0
chr22:37774112|37774319 hsa-miR-885-3p 1 0 0
chr22:37774112|37774319 hsa-miR-6823-5p 1 1 0
chr22:37774112|37774319 hsa-miR-4787-5p 1 0 0
chr22:37774112|37774319 hsa-miR-149-3p 1 0 0
chr22:37774112|37774319 hsa-miR-4733-3p 0 1 0
chr22:37774112|37774319 hsa-miR-4776-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6895-5p 0 1 0
chr22:37774112|37774319 hsa-miR-6804-3p 1 0 0
chr22:37774112|37774319 hsa-miR-6801-5p 1 0 0
chr22:37774112|37774319 hsa-miR-3664-3p 0 1 0
chr22:37774112|37774319 hsa-miR-3144-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6789-3p 1 0 0
chr22:37774112|37774319 hsa-miR-6870-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6893-5p 0 1 0
chr22:37774112|37774319 hsa-miR-5001-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6743-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6752-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6754-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6756-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6803-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6842-5p 0 1 0
chr22:37774112|37774319 hsa-miR-6851-5p 1 0 0
chr22:37774112|37774319 hsa-miR-7110-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6722-3p 1 0 0
chr22:37774112|37774319 hsa-miR-6875-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6879-5p 1 1 0
chr22:37774112|37774319 hsa-miR-7111-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4728-5p 1 0 0
chr22:37774112|37774319 hsa-miR-10526-3p 1 0 0
chr22:37774112|37774319 hsa-miR-328-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4632-5p 1 1 0
chr22:37774112|37774319 hsa-miR-4649-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4726-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4749-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6794-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6795-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6848-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6887-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4436b-3p 1 1 0
chr22:37774112|37774319 hsa-miR-6885-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6511a-5p 1 1 0
chr22:37774112|37774319 hsa-miR-1914-3p 1 0 0
chr22:37774112|37774319 hsa-miR-4665-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6891-5p 1 0 0
chr22:37774112|37774319 hsa-miR-4716-3p 1 0 0
chr22:37774112|37774319 hsa-miR-10398-5p 1 1 0
chr22:37774112|37774319 hsa-miR-6762-5p 1 0 0
chr22:37774112|37774319 hsa-miR-6837-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:37774112|37774319
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MVAVCLQPWSPSVSSHPLLGLLSWWPWPRGLAEAQAAAMAGCLYRGEAGACHPLPAL
Nucleotide Sequence CTGGTGGCTGTGTGCCTCCAACCCTGGTCCCCCTCTGTCTCCAGCCACCCTCTGCTTGGGCTTCTGAGCTGGTGGCCCTGGCCCAGAGGTCTGGCGGAGGCCCAGGCAGCAGCCATGGCGGGGTGTCTCTACAGGGGAGAGGCGGGAGCCTGCCACCCTCTTCCTGCCCTA
CircID chr22:37774112|37774319
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MVPLCLQPPSAWASELVALAQRSGGGPGSSHGGVSLQGRGGSLPPSSCP
Nucleotide Sequence CTGGTCCCCCTCTGTCTCCAGCCACCCTCTGCTTGGGCTTCTGAGCTGGTGGCCCTGGCCCAGAGGTCTGGCGGAGGCCCAGGCAGCAGCCATGGCGGGGTGTCTCTACAGGGGAGAGGCGGGAGCCTGCCACCCTCTTCCTGCCCT
CircID chr22:37774112|37774319
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MLPGPPPDLWARATSSEAQAEGGWRQRGTRVGGTQPPGIAFFFFF
Nucleotide Sequence CTGCTGCCTGGGCCTCCGCCAGACCTCTGGGCCAGGGCCACCAGCTCAGAAGCCCAAGCAGAGGGTGGCTGGAGACAGAGGGGGACCAGGGTTGGAGGCACACAGCCACCAGGAATTGCTTTTTTTTTTTTTTTTTAA
CircID chr22:37774112|37774319
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MGLRQTSGPGPPAQKPKQRVAGDRGGPGLEAHSHQELLFFFFFKV
Nucleotide Sequence CTGGGCCTCCGCCAGACCTCTGGGCCAGGGCCACCAGCTCAGAAGCCCAAGCAGAGGGTGGCTGGAGACAGAGGGGGACCAGGGTTGGAGGCACACAGCCACCAGGAATTGCTTTTTTTTTTTTTTTTTAAAGTATAA
CircID chr22:37774112|37774319
ORF Type ORF5
Protein Length 50
Nucleotide Length 150
Protein Sequence MAAAWASARPLGQGHQLRSPSRGWLETEGDQGWRHTATRNCFFFFFLKYK
Nucleotide Sequence ATGGCTGCTGCCTGGGCCTCCGCCAGACCTCTGGGCCAGGGCCACCAGCTCAGAAGCCCAAGCAGAGGGTGGCTGGAGACAGAGGGGGACCAGGGTTGGAGGCACACAGCCACCAGGAATTGCTTTTTTTTTTTTTTTTTAAAGTATAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab