CircRNA Information

General Information
circRNA Basic Information
CircID chr22:37943099|37943259
Strand -
CircType exon
Host Gene ENSG00000128346.9;
Algorism CIRI2;
Sequence TCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATTTAGTGGGACAAGCAAATGACAGAATACCGGAGAAGGCAGGGATCGTGGGTGTCAGGAGCCAGAGGGGAGGGGGACAGATGTGCTGTGTACAGGACAAGGTGTCAGGTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:37943099|37943259 hsa-miR-149-5p 0 0 1
chr22:37943099|37943259 hsa-miR-149-3p 0 0 1
chr22:37943099|37943259 hsa-miR-579-5p 0 0 1
chr22:37943099|37943259 hsa-miR-579-3p 0 0 1
chr22:37943099|37943259 hsa-miR-616-5p 0 0 1
chr22:37943099|37943259 hsa-miR-616-3p 0 0 1
chr22:37943099|37943259 hsa-miR-619-5p 0 0 1
chr22:37943099|37943259 hsa-miR-619-3p 0 0 1
chr22:37943099|37943259 hsa-miR-630 0 0 1
chr22:37943099|37943259 hsa-miR-486-5p 0 0 1
chr22:37943099|37943259 hsa-miR-133b 1 0 0
chr22:37943099|37943259 hsa-miR-892b 1 0 0
chr22:37943099|37943259 hsa-miR-1470 1 0 0
chr22:37943099|37943259 hsa-miR-1913 1 0 0
chr22:37943099|37943259 hsa-miR-1976 1 0 0
chr22:37943099|37943259 hsa-miR-4301 0 1 0
chr22:37943099|37943259 hsa-miR-4312 1 0 0
chr22:37943099|37943259 hsa-miR-4268 1 0 0
chr22:37943099|37943259 hsa-miR-4794 1 0 0
chr22:37943099|37943259 hsa-miR-5193 1 0 0
chr22:37943099|37943259 hsa-miR-6749-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6747-3p 1 1 0
chr22:37943099|37943259 hsa-miR-6836-3p 1 0 0
chr22:37943099|37943259 hsa-miR-212-5p 1 0 0
chr22:37943099|37943259 hsa-miR-215-3p 0 1 0
chr22:37943099|37943259 hsa-miR-6892-3p 1 0 0
chr22:37943099|37943259 hsa-miR-23b-5p 1 0 0
chr22:37943099|37943259 hsa-miR-7110-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6817-3p 1 0 0
chr22:37943099|37943259 hsa-miR-1915-5p 1 0 0
chr22:37943099|37943259 hsa-miR-6845-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6728-3p 1 0 0
chr22:37943099|37943259 hsa-miR-4713-5p 1 0 0
chr22:37943099|37943259 hsa-miR-4436b-5p 1 0 0
chr22:37943099|37943259 hsa-miR-6772-3p 1 0 0
chr22:37943099|37943259 hsa-miR-2277-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6803-3p 1 0 0
chr22:37943099|37943259 hsa-miR-5001-3p 1 0 0
chr22:37943099|37943259 hsa-miR-3074-3p 1 0 0
chr22:37943099|37943259 hsa-miR-7113-3p 1 0 0
chr22:37943099|37943259 hsa-miR-4743-3p 0 1 0
chr22:37943099|37943259 hsa-miR-7111-3p 1 0 0
chr22:37943099|37943259 hsa-miR-4667-3p 1 0 0
chr22:37943099|37943259 hsa-miR-378a-5p 1 1 0
chr22:37943099|37943259 hsa-miR-1306-5p 1 0 0
chr22:37943099|37943259 hsa-miR-6786-3p 1 0 0
chr22:37943099|37943259 hsa-miR-339-5p 1 0 0
chr22:37943099|37943259 hsa-miR-4646-3p 1 1 0
chr22:37943099|37943259 hsa-miR-1237-3p 1 0 0
chr22:37943099|37943259 hsa-miR-1236-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6889-3p 1 0 0
chr22:37943099|37943259 hsa-miR-345-5p 1 0 0
chr22:37943099|37943259 hsa-miR-7106-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6813-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6730-3p 1 1 0
chr22:37943099|37943259 hsa-miR-6719-3p 1 1 0
chr22:37943099|37943259 hsa-miR-6867-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6887-3p 1 1 0
chr22:37943099|37943259 hsa-miR-2276-5p 0 1 0
chr22:37943099|37943259 hsa-miR-6752-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6826-3p 1 1 0
chr22:37943099|37943259 hsa-miR-6886-3p 1 0 0
chr22:37943099|37943259 hsa-miR-5088-3p 1 0 0
chr22:37943099|37943259 hsa-miR-4749-3p 1 0 0
chr22:37943099|37943259 hsa-miR-328-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6795-3p 1 0 0
chr22:37943099|37943259 hsa-miR-4649-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6748-3p 1 0 0
chr22:37943099|37943259 hsa-miR-3173-5p 1 0 0
chr22:37943099|37943259 hsa-miR-4433b-5p 1 0 0
chr22:37943099|37943259 hsa-miR-6734-3p 1 0 0
chr22:37943099|37943259 hsa-miR-1249-3p 1 0 0
chr22:37943099|37943259 hsa-miR-642a-5p 1 0 0
chr22:37943099|37943259 hsa-miR-6800-3p 1 0 0
chr22:37943099|37943259 hsa-miR-3162-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6731-3p 1 0 0
chr22:37943099|37943259 hsa-miR-133a-3p 1 0 0
chr22:37943099|37943259 hsa-miR-3127-3p 1 0 0
chr22:37943099|37943259 hsa-miR-4685-3p 1 1 0
chr22:37943099|37943259 hsa-miR-10398-5p 1 0 0
chr22:37943099|37943259 hsa-miR-6753-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6727-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6756-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6801-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6829-3p 1 0 0
chr22:37943099|37943259 hsa-miR-3622a-3p 1 1 0
chr22:37943099|37943259 hsa-miR-4723-3p 1 1 0
chr22:37943099|37943259 hsa-miR-6769b-3p 1 0 0
chr22:37943099|37943259 hsa-miR-6824-3p 1 1 0
chr22:37943099|37943259 hsa-miR-5588-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:37943099|37943259
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MIFPKYFGDLVGQANDRIPEKAGIVGVRSQRGGGQMCCVQDKVSG
Nucleotide Sequence TTGATATTTCCAAAATATTTTGGTGATTTAGTGGGACAAGCAAATGACAGAATACCGGAGAAGGCAGGGATCGTGGGTGTCAGGAGCCAGAGGGGAGGGGGACAGATGTGCTGTGTACAGGACAAGGTGTCAGGT
CircID chr22:37943099|37943259
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MTEYRRRQGSWVSGARGEGDRCAVYRTRCQV
Nucleotide Sequence ATGACAGAATACCGGAGAAGGCAGGGATCGTGGGTGTCAGGAGCCAGAGGGGAGGGGGACAGATGTGCTGTGTACAGGACAAGGTGTCAGGTG
CircID chr22:37943099|37943259
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MSCTQHICPPPLWLLTPTIPAFSGILSFACPTKSPKYFGNINLVSGTWR
Nucleotide Sequence TTGTCCTGTACACAGCACATCTGTCCCCCTCCCCTCTGGCTCCTGACACCCACGATCCCTGCCTTCTCCGGTATTCTGTCATTTGCTTGTCCCACTAAATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGG
CircID chr22:37943099|37943259
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MPSPVFCHLLVPLNHQNILEISTLSRAPGG
Nucleotide Sequence CTGCCTTCTCCGGTATTCTGTCATTTGCTTGTCCCACTAAATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGG
CircID chr22:37943099|37943259
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MYTAHLSPSPLAPDTHDPCLLRYSVICLSH
Nucleotide Sequence CTGTACACAGCACATCTGTCCCCCTCCCCTCTGGCTCCTGACACCCACGATCCCTGCCTTCTCCGGTATTCTGTCATTTGCTTGTCCCACTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab