CircRNA Information

General Information
circRNA Basic Information
CircID chr22:38219623|38219794
Strand -
CircType exon
Host Gene ENSG00000198792.11;
Algorism CIRI2;
Sequence CGCTGATTCCCTGCCACTGAGCTCCCCCCACCCTCCACGCAAACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGGAGGGAGAAGGGAAGCCACGGTGGAGAGACAGCTTGGTGAAAGCAGATGGCGGGGCAGGGCCAGGGCTGGTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:38219623|38219794 hsa-miR-17-5p 0 0 1
chr22:38219623|38219794 hsa-miR-17-3p 0 0 1
chr22:38219623|38219794 hsa-miR-20a-5p 0 0 1
chr22:38219623|38219794 hsa-miR-20a-3p 0 0 1
chr22:38219623|38219794 hsa-miR-93-5p 0 0 1
chr22:38219623|38219794 hsa-miR-93-3p 0 0 1
chr22:38219623|38219794 hsa-miR-106a-5p 0 0 1
chr22:38219623|38219794 hsa-miR-106a-3p 0 0 1
chr22:38219623|38219794 hsa-miR-197-5p 0 0 1
chr22:38219623|38219794 hsa-miR-197-3p 0 0 1
chr22:38219623|38219794 hsa-miR-204-5p 0 0 1
chr22:38219623|38219794 hsa-miR-204-3p 0 0 1
chr22:38219623|38219794 hsa-miR-211-5p 0 0 1
chr22:38219623|38219794 hsa-miR-211-3p 0 0 1
chr22:38219623|38219794 hsa-miR-106b-5p 0 0 1
chr22:38219623|38219794 hsa-miR-106b-3p 0 0 1
chr22:38219623|38219794 hsa-miR-302a-5p 0 0 1
chr22:38219623|38219794 hsa-miR-302a-3p 0 0 1
chr22:38219623|38219794 hsa-miR-302b-5p 0 0 1
chr22:38219623|38219794 hsa-miR-302b-3p 0 0 1
chr22:38219623|38219794 hsa-miR-302c-5p 0 0 1
chr22:38219623|38219794 hsa-miR-302c-3p 0 0 1
chr22:38219623|38219794 hsa-miR-302d-5p 0 0 1
chr22:38219623|38219794 hsa-miR-302d-3p 0 0 1
chr22:38219623|38219794 hsa-miR-372-5p 0 0 1
chr22:38219623|38219794 hsa-miR-372-3p 0 0 1
chr22:38219623|38219794 hsa-miR-373-5p 0 0 1
chr22:38219623|38219794 hsa-miR-373-3p 0 0 1
chr22:38219623|38219794 hsa-miR-328-5p 0 0 1
chr22:38219623|38219794 hsa-miR-328-3p 0 0 1
chr22:38219623|38219794 hsa-miR-20b-5p 0 0 1
chr22:38219623|38219794 hsa-miR-20b-3p 0 0 1
chr22:38219623|38219794 hsa-miR-520e-5p 0 0 1
chr22:38219623|38219794 hsa-miR-520e-3p 0 0 1
chr22:38219623|38219794 hsa-miR-520b-5p 0 0 1
chr22:38219623|38219794 hsa-miR-520b-3p 0 0 1
chr22:38219623|38219794 hsa-miR-519d-5p 0 0 1
chr22:38219623|38219794 hsa-miR-519d-3p 0 0 1
chr22:38219623|38219794 hsa-miR-520g-5p 0 0 1
chr22:38219623|38219794 hsa-miR-520g-3p 0 0 1
chr22:38219623|38219794 hsa-miR-520h -10 1 1
chr22:38219623|38219794 hsa-miR-593-5p 0 0 1
chr22:38219623|38219794 hsa-miR-593-3p 0 0 1
chr22:38219623|38219794 hsa-miR-623 -10 0 1
chr22:38219623|38219794 hsa-miR-626 -3 0 1
chr22:38219623|38219794 hsa-miR-920 -4 1 1
chr22:38219623|38219794 hsa-miR-939-5p 0 0 1
chr22:38219623|38219794 hsa-miR-939-3p 0 0 1
chr22:38219623|38219794 hsa-miR-1291 -15 0 1
chr22:38219623|38219794 hsa-miR-302e -5 0 1
chr22:38219623|38219794 hsa-miR-512-3p -8 0 1
chr22:38219623|38219794 hsa-miR-188-3p -10 0 1
chr22:38219623|38219794 hsa-miR-1207-5p 0 1 1
chr22:38219623|38219794 hsa-miR-324-3p -15 0 1
chr22:38219623|38219794 hsa-miR-520d-3p -8 0 1
chr22:38219623|38219794 hsa-miR-520a-3p -11 0 1
chr22:38219623|38219794 hsa-miR-520c-3p -6 0 1
chr22:38219623|38219794 hsa-miR-1260 0 0 1
chr22:38219623|38219794 hsa-miR-1913 -19 1 0
chr22:38219623|38219794 hsa-miR-4258 -16 1 0
chr22:38219623|38219794 hsa-miR-4469 -12 1 0
chr22:38219623|38219794 hsa-miR-5698 -8 1 0
chr22:38219623|38219794 hsa-miR-7150 0 1 0
chr22:38219623|38219794 hsa-miR-12115 0 1 0
chr22:38219623|38219794 hsa-miR-132-5p -10 1 0
chr22:38219623|38219794 hsa-miR-214-5p -12 1 0
chr22:38219623|38219794 hsa-miR-212-5p -9 1 0
chr22:38219623|38219794 hsa-miR-6515-5p -12 1 0
chr22:38219623|38219794 hsa-miR-7847-3p -13 1 0
chr22:38219623|38219794 hsa-miR-942-5p -13 1 0
chr22:38219623|38219794 hsa-miR-6821-5p -23 1 0
chr22:38219623|38219794 hsa-miR-7109-5p -8 1 0
chr22:38219623|38219794 hsa-miR-4763-5p -18 1 0
chr22:38219623|38219794 hsa-miR-6809-3p -15 1 0
chr22:38219623|38219794 hsa-miR-1910-5p -18 1 0
chr22:38219623|38219794 hsa-miR-6752-3p -15 1 0
chr22:38219623|38219794 hsa-miR-6895-3p -18 1 0
chr22:38219623|38219794 hsa-miR-5088-3p -16 1 0
chr22:38219623|38219794 hsa-miR-3173-5p -19 1 0
chr22:38219623|38219794 hsa-miR-6779-3p -15 1 0
chr22:38219623|38219794 hsa-miR-3156-3p -12 1 0
chr22:38219623|38219794 hsa-miR-6756-5p -19 1 0
chr22:38219623|38219794 hsa-miR-7110-5p -18 1 0
chr22:38219623|38219794 hsa-miR-320a-5p -11 1 0
chr22:38219623|38219794 hsa-miR-6887-5p -11 1 0
chr22:38219623|38219794 hsa-miR-6511b-5p 0 1 0
chr22:38219623|38219794 hsa-miR-4472 -9 1 0
chr22:38219623|38219794 hsa-miR-6766-5p -7 1 0
chr22:38219623|38219794 hsa-miR-5591-5p -2 1 0
chr22:38219623|38219794 hsa-miR-6775-3p -22 1 0
chr22:38219623|38219794 hsa-miR-4691-5p -23 1 0
chr22:38219623|38219794 hsa-miR-6876-3p -19 1 0
chr22:38219623|38219794 hsa-miR-5006-3p -11 1 0
chr22:38219623|38219794 hsa-miR-3922-3p -14 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:38219623|38219794
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MGRRKPREWESAALWPGGRREATVERQLGESRWRGRARAG
Nucleotide Sequence CTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGGAGGGAGAAGGGAAGCCACGGTGGAGAGACAGCTTGGTGAAAGCAGATGGCGGGGCAGGGCCAGGGCTGGT
CircID chr22:38219623|38219794
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MPLSSPHPPRKQQRWAGENQGSGNQQHFGLEGEGKPRWRDSLVKADGGAGPGLV
Nucleotide Sequence CTGCCACTGAGCTCCCCCCACCCTCCACGCAAACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGGAGGGAGAAGGGAAGCCACGGTGGAGAGACAGCTTGGTGAAAGCAGATGGCGGGGCAGGGCCAGGGCTGGTC
CircID chr22:38219623|38219794
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MLIPTPLVFACPALLFAWRVGGAQWQGIS
Nucleotide Sequence CTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCGTGGAGGGTGGGGGGAGCTCAGTGGCAGGGAATCAGC
CircID chr22:38219623|38219794
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MALPRHLLSPSCLSTVASLLPPGQSAADSHSLGFRLPSVAVCVEGGGSSVAGNQ
Nucleotide Sequence CTGGCCCTGCCCCGCCATCTGCTTTCACCAAGCTGTCTCTCCACCGTGGCTTCCCTTCTCCCTCCAGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCGTGGAGGGTGGGGGGAGCTCAGTGGCAGGGAATCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab