CircRNA Information

General Information
circRNA Basic Information
CircID chr22:38302957|38314115
Strand -
CircType exon
Host Gene ENSG00000213923.9;
Algorism CIRI2;
Sequence CATCACGTTGTAGTCGCCCTCAGCTCCGCACCACTTGATGGACGGGATCCCCACTGGGGGTCAAGCAGAGGGCCTCTGTCAGGGGTCAGAGGCAGGCAGCCAGCCACGCCCGGCCCACCCTGTGCTCATGGCTGCCCACCGCCACCCACCCGGCGCCCGCCGCCGCCCACCCTGCGCTCACCGCCACCCTGCATCATCTTGTAGAACTTGCTCTCGATGTGCAGCTGGGGGTGCTTTGTCTTCACACACTCCAGCTTGATGGCGACTTCCTCACCAGAGGCGATGTTGGCACCCAGGTAGATATCTCCGAAGGACCCGCTCCCGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:38302957|38314115 hsa-miR-122-5p 0 0 1
chr22:38302957|38314115 hsa-miR-122-3p 0 0 1
chr22:38302957|38314115 hsa-miR-604 0 0 1
chr22:38302957|38314115 hsa-miR-619-5p 0 0 1
chr22:38302957|38314115 hsa-miR-619-3p 0 0 1
chr22:38302957|38314115 hsa-miR-647 0 0 1
chr22:38302957|38314115 hsa-miR-658 0 0 1
chr22:38302957|38314115 hsa-miR-675-5p 0 0 1
chr22:38302957|38314115 hsa-miR-675-3p 0 0 1
chr22:38302957|38314115 hsa-miR-541-5p 0 0 1
chr22:38302957|38314115 hsa-miR-541-3p 0 0 1
chr22:38302957|38314115 hsa-miR-1293 0 0 1
chr22:38302957|38314115 hsa-miR-1247-5p 0 0 1
chr22:38302957|38314115 hsa-miR-1247-3p 0 0 1
chr22:38302957|38314115 hsa-miR-1281 0 0 1
chr22:38302957|38314115 hsa-miR-1322 0 0 1
chr22:38302957|38314115 hsa-miR-491-5p 0 0 1
chr22:38302957|38314115 hsa-miR-1283 0 0 1
chr22:38302957|38314115 hsa-miR-574-5p 0 0 1
chr22:38302957|38314115 hsa-miR-654-5p 0 0 1
chr22:38302957|38314115 hsa-miR-339-3p 0 0 1
chr22:38302957|38314115 hsa-miR-330-3p 0 0 1
chr22:38302957|38314115 hsa-miR-361-3p 0 0 1
chr22:38302957|38314115 hsa-miR-220c 0 0 1
chr22:38302957|38314115 hsa-miR-1268 0 0 1
chr22:38302957|38314115 hsa-miR-608 1 0 0
chr22:38302957|38314115 hsa-miR-663a 1 0 0
chr22:38302957|38314115 hsa-miR-762 1 0 0
chr22:38302957|38314115 hsa-miR-933 1 0 0
chr22:38302957|38314115 hsa-miR-1268a 1 0 0
chr22:38302957|38314115 hsa-miR-3141 1 0 0
chr22:38302957|38314115 hsa-miR-3147 1 0 0
chr22:38302957|38314115 hsa-miR-3195 1 0 0
chr22:38302957|38314115 hsa-miR-3196 1 0 0
chr22:38302957|38314115 hsa-miR-3652 1 0 0
chr22:38302957|38314115 hsa-miR-1268b 1 0 0
chr22:38302957|38314115 hsa-miR-4430 1 0 0
chr22:38302957|38314115 hsa-miR-4466 1 0 0
chr22:38302957|38314115 hsa-miR-4467 1 0 0
chr22:38302957|38314115 hsa-miR-4488 1 0 0
chr22:38302957|38314115 hsa-miR-1587 1 0 0
chr22:38302957|38314115 hsa-miR-3960 1 0 0
chr22:38302957|38314115 hsa-miR-4651 1 0 0
chr22:38302957|38314115 hsa-miR-4706 1 0 0
chr22:38302957|38314115 hsa-miR-4710 1 0 0
chr22:38302957|38314115 hsa-miR-4734 1 0 0
chr22:38302957|38314115 hsa-miR-4767 1 0 0
chr22:38302957|38314115 hsa-miR-6088 1 0 0
chr22:38302957|38314115 hsa-miR-6090 1 0 0
chr22:38302957|38314115 hsa-miR-7704 1 0 0
chr22:38302957|38314115 hsa-miR-8072 1 0 0
chr22:38302957|38314115 hsa-miR-12114 1 0 0
chr22:38302957|38314115 hsa-miR-12115 1 0 0
chr22:38302957|38314115 hsa-miR-4433b-3p 1 0 0
chr22:38302957|38314115 hsa-miR-504-3p 1 0 0
chr22:38302957|38314115 hsa-miR-4433a-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6765-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6799-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3663-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6880-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6746-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3677-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6741-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6742-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1292-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3180-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6793-5p 1 0 0
chr22:38302957|38314115 hsa-miR-185-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6732-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6805-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6827-5p 1 0 0
chr22:38302957|38314115 hsa-miR-486-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6782-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6514-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3150b-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6821-5p 1 0 0
chr22:38302957|38314115 hsa-miR-7855-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6786-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1226-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1908-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1228-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6771-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6501-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3616-3p 1 0 0
chr22:38302957|38314115 hsa-miR-4776-3p 1 0 0
chr22:38302957|38314115 hsa-miR-744-5p 1 0 0
chr22:38302957|38314115 hsa-miR-10400-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1233-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6769b-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6787-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1343-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3180 1 0 0
chr22:38302957|38314115 hsa-miR-6726-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6756-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6803-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6815-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6851-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6722-3p 1 0 0
chr22:38302957|38314115 hsa-miR-6751-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6779-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6808-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6879-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3620-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6836-5p 1 0 0
chr22:38302957|38314115 hsa-miR-10396b-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1237-5p 1 0 0
chr22:38302957|38314115 hsa-miR-1909-3p 1 0 0
chr22:38302957|38314115 hsa-miR-328-5p 1 0 0
chr22:38302957|38314115 hsa-miR-4632-5p 1 0 0
chr22:38302957|38314115 hsa-miR-4745-5p 1 0 0
chr22:38302957|38314115 hsa-miR-6848-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3187-5p 1 0 0
chr22:38302957|38314115 hsa-miR-4758-5p 1 0 0
chr22:38302957|38314115 hsa-miR-3085-5p 1 0 0
chr22:38302957|38314115 hsa-miR-30c-1-3p 1 0 0
chr22:38302957|38314115 hsa-miR-320a-3p 1 0 0
chr22:38302957|38314115 hsa-miR-320b 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:38302957|38314115
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MSGVRGRQPATPGPPCAHGCPPPPTRRPPPPTLRSPPPCIIL
Nucleotide Sequence CTGTCAGGGGTCAGAGGCAGGCAGCCAGCCACGCCCGGCCCACCCTGTGCTCATGGCTGCCCACCGCCACCCACCCGGCGCCCGCCGCCGCCCACCCTGCGCTCACCGCCACCCTGCATCATCTTGTAG
CircID chr22:38302957|38314115
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MLSMCSWGCFVFTHSSLMATSSPEAMLAPR
Nucleotide Sequence TTGCTCTCGATGTGCAGCTGGGGGTGCTTTGTCTTCACACACTCCAGCTTGATGGCGACTTCCTCACCAGAGGCGATGTTGGCACCCAGGTAG
CircID chr22:38302957|38314115
ORF Type ORF3
Protein Length 74
Nucleotide Length 225
Protein Sequence MMDGIPTGGQAEGLCQGSEAGSQPRPAHPVLMAAHRHPPGARRRPPCAHRHPASSCRTCSRCAAGGALSSHTPA
Nucleotide Sequence TTGATGGACGGGATCCCCACTGGGGGTCAAGCAGAGGGCCTCTGTCAGGGGTCAGAGGCAGGCAGCCAGCCACGCCCGGCCCACCCTGTGCTCATGGCTGCCCACCGCCACCCACCCGGCGCCCGCCGCCGCCCACCCTGCGCTCACCGCCACCCTGCATCATCTTGTAGAACTTGCTCTCGATGTGCAGCTGGGGGTGCTTTGTCTTCACACACTCCAGCTTGA
CircID chr22:38302957|38314115
ORF Type ORF4
Protein Length 91
Nucleotide Length 273
Protein Sequence MGVKQRASVRGQRQAASHARPTLCSWLPTATHPAPAAAHPALTATLHHLVELALDVQLGVLCLHTLQLDGDFLTRGDVGTQVDISEGPAPD
Nucleotide Sequence CTGGGGGTCAAGCAGAGGGCCTCTGTCAGGGGTCAGAGGCAGGCAGCCAGCCACGCCCGGCCCACCCTGTGCTCATGGCTGCCCACCGCCACCCACCCGGCGCCCGCCGCCGCCCACCCTGCGCTCACCGCCACCCTGCATCATCTTGTAGAACTTGCTCTCGATGTGCAGCTGGGGGTGCTTTGTCTTCACACACTCCAGCTTGATGGCGACTTCCTCACCAGAGGCGATGTTGGCACCCAGGTAGATATCTCCGAAGGACCCGCTCCCGAT
CircID chr22:38302957|38314115
ORF Type ORF5
Protein Length 56
Nucleotide Length 171
Protein Sequence MGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGGERRVGGGGRRVGGGGQP
Nucleotide Sequence CTGGGTGCCAACATCGCCTCTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGAAGACAAAGCACCCCCAGCTGCACATCGAGAGCAAGTTCTACAAGATGATGCAGGGTGGCGGTGAGCGCAGGGTGGGCGGCGGCGGGCGCCGGGTGGGTGGCGGTGGGCAGCCATGA
CircID chr22:38302957|38314115
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MPLTPDRGPLLDPQWGSRPSSGAELRATTT
Nucleotide Sequence CTGCCTCTGACCCCTGACAGAGGCCCTCTGCTTGACCCCCAGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGAGGGCGACTACAACGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab