CircRNA Information

General Information
circRNA Basic Information
CircID chr22:38483134|38483360
Strand -
CircType exon
Host Gene ENSG00000100196.9;
Algorism CIRI2;
Sequence CAGTGGCTGATACCTGCCTTGTACTTAGTACCTTAATACCAATAACCTAATGGTACTTAGGCGAGTACCATTTGCACAATCACTGTTTTACTTATGAGCAGATACAGATATATCCAAACCCTTACCTACTAGGTATCCTGCTAGGGTTTTCAATTCCAATTCTTGTATTAAGTTTTTTCCTTTCAGTTTTAGGTGCGAAAGTAATCAGTCAATCCAATATCCCCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:38483134|38483360 hsa-miR-19a-5p 0 0 1
chr22:38483134|38483360 hsa-miR-19a-3p 0 0 1
chr22:38483134|38483360 hsa-miR-154-5p 0 0 1
chr22:38483134|38483360 hsa-miR-154-3p 0 0 1
chr22:38483134|38483360 hsa-miR-381-5p 0 0 1
chr22:38483134|38483360 hsa-miR-381-3p 0 0 1
chr22:38483134|38483360 hsa-miR-325 0 1 1
chr22:38483134|38483360 hsa-miR-488-5p 0 0 1
chr22:38483134|38483360 hsa-miR-488-3p 0 0 1
chr22:38483134|38483360 hsa-miR-522-5p 0 0 1
chr22:38483134|38483360 hsa-miR-522-3p 0 0 1
chr22:38483134|38483360 hsa-miR-570-5p 0 0 1
chr22:38483134|38483360 hsa-miR-570-3p 0 0 1
chr22:38483134|38483360 hsa-miR-624-5p 0 0 1
chr22:38483134|38483360 hsa-miR-624-3p 0 0 1
chr22:38483134|38483360 hsa-miR-625-5p 0 0 1
chr22:38483134|38483360 hsa-miR-625-3p 0 0 1
chr22:38483134|38483360 hsa-miR-655-5p 0 0 1
chr22:38483134|38483360 hsa-miR-655-3p 0 0 1
chr22:38483134|38483360 hsa-miR-300 0 0 1
chr22:38483134|38483360 hsa-miR-940 0 0 1
chr22:38483134|38483360 hsa-miR-943 0 0 1
chr22:38483134|38483360 hsa-miR-548e-5p 0 0 1
chr22:38483134|38483360 hsa-miR-548e-3p 0 0 1
chr22:38483134|38483360 hsa-miR-1261 0 0 1
chr22:38483134|38483360 hsa-miR-1275 1 0 1
chr22:38483134|38483360 hsa-miR-767-3p 0 0 1
chr22:38483134|38483360 hsa-miR-508-3p 0 0 1
chr22:38483134|38483360 hsa-miR-548a-3p 0 0 1
chr22:38483134|38483360 hsa-miR-548f 0 0 1
chr22:38483134|38483360 hsa-miR-19b 0 0 1
chr22:38483134|38483360 hsa-miR-219-5p 0 0 1
chr22:38483134|38483360 hsa-miR-4499 1 0 0
chr22:38483134|38483360 hsa-miR-4525 1 1 0
chr22:38483134|38483360 hsa-miR-5698 1 0 0
chr22:38483134|38483360 hsa-miR-6165 1 0 0
chr22:38483134|38483360 hsa-miR-4687-3p 1 0 0
chr22:38483134|38483360 hsa-miR-6515-5p 1 0 0
chr22:38483134|38483360 hsa-miR-6796-5p 1 0 0
chr22:38483134|38483360 hsa-miR-6835-5p 1 0 0
chr22:38483134|38483360 hsa-miR-7109-5p 1 0 0
chr22:38483134|38483360 hsa-miR-652-5p 0 1 0
chr22:38483134|38483360 hsa-miR-17-5p 1 0 0
chr22:38483134|38483360 hsa-miR-106a-5p 1 0 0
chr22:38483134|38483360 hsa-miR-224-3p 0 1 0
chr22:38483134|38483360 hsa-miR-6841-5p 0 1 0
chr22:38483134|38483360 hsa-miR-6870-5p 1 0 0
chr22:38483134|38483360 hsa-miR-6893-5p 0 1 0
chr22:38483134|38483360 hsa-miR-6803-5p 1 0 0
chr22:38483134|38483360 hsa-miR-6751-5p 1 0 0
chr22:38483134|38483360 hsa-miR-7111-5p 1 0 0
chr22:38483134|38483360 hsa-miR-328-5p 1 0 0
chr22:38483134|38483360 hsa-miR-4665-5p 1 0 0
chr22:38483134|38483360 hsa-miR-3679-5p 0 1 0
chr22:38483134|38483360 hsa-miR-5579-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:38483134|38483360
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MHNHCFTYEQIQIYPNPYLLGILLGFSIPILVLSFFLSVLGAKVISQSNIPH
Nucleotide Sequence TTGCACAATCACTGTTTTACTTATGAGCAGATACAGATATATCCAAACCCTTACCTACTAGGTATCCTGCTAGGGTTTTCAATTCCAATTCTTGTATTAAGTTTTTTCCTTTCAGTTTTAGGTGCGAAAGTAATCAGTCAATCCAATATCCCCCAT

CircID chr22:38483134|38483360
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MITFAPKTERKKLNTRIGIENPSRIPSR
Nucleotide Sequence CTGATTACTTTCGCACCTAAAACTGAAAGGAAAAAACTTAATACAAGAATTGGAATTGAAAACCCTAGCAGGATACCTAGTAGGTAA

CircID chr22:38483134|38483360
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MKGKNLIQELELKTLAGYLVGKGLDISVSAHK
Nucleotide Sequence CTGAAAGGAAAAAACTTAATACAAGAATTGGAATTGAAAACCCTAGCAGGATACCTAGTAGGTAAGGGTTTGGATATATCTGTATCTGCTCATAAGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites