CircRNA Information

General Information
circRNA Basic Information
CircID chr22:38735558|38735789
Strand -
CircType exon
Host Gene ENSG00000100242.14;
Algorism CIRI2;
Sequence TACCGTCCCCAGCAGAGGGGAAGCCTACAGGGTTGGCCCTGGGCCCCTTAGAAGATCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCAGGGACCCTGTGGTTCATGCTTCCCTAGGTGGAGGGCACTAACCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:38735558|38735789 hsa-miR-22-5p 0 0 1
chr22:38735558|38735789 hsa-miR-22-3p 0 0 1
chr22:38735558|38735789 hsa-miR-10a-5p 0 0 1
chr22:38735558|38735789 hsa-miR-10a-3p 0 0 1
chr22:38735558|38735789 hsa-miR-10b-5p 0 0 1
chr22:38735558|38735789 hsa-miR-10b-3p 0 0 1
chr22:38735558|38735789 hsa-miR-185-5p 0 0 1
chr22:38735558|38735789 hsa-miR-185-3p 0 0 1
chr22:38735558|38735789 hsa-miR-519e-5p 0 0 1
chr22:38735558|38735789 hsa-miR-519e-3p 0 0 1
chr22:38735558|38735789 hsa-miR-558 0 0 1
chr22:38735558|38735789 hsa-miR-578 0 1 1
chr22:38735558|38735789 hsa-miR-581 0 0 1
chr22:38735558|38735789 hsa-miR-595 0 0 1
chr22:38735558|38735789 hsa-miR-604 0 0 1
chr22:38735558|38735789 hsa-miR-624-5p 0 0 1
chr22:38735558|38735789 hsa-miR-624-3p 0 0 1
chr22:38735558|38735789 hsa-miR-647 0 0 1
chr22:38735558|38735789 hsa-miR-892b 0 0 1
chr22:38735558|38735789 hsa-miR-140-3p 0 1 1
chr22:38735558|38735789 hsa-miR-125a-5p 0 1 1
chr22:38735558|38735789 hsa-miR-515-3p 0 0 1
chr22:38735558|38735789 hsa-miR-125b 0 0 1
chr22:38735558|38735789 hsa-miR-220c 0 0 1
chr22:38735558|38735789 hsa-miR-371-3p 0 0 1
chr22:38735558|38735789 hsa-miR-637 0 1 0
chr22:38735558|38735789 hsa-miR-658 1 0 0
chr22:38735558|38735789 hsa-miR-762 1 0 0
chr22:38735558|38735789 hsa-miR-1182 1 0 0
chr22:38735558|38735789 hsa-miR-2861 1 0 0
chr22:38735558|38735789 hsa-miR-4321 1 0 0
chr22:38735558|38735789 hsa-miR-4281 1 1 0
chr22:38735558|38735789 hsa-miR-3911 1 0 0
chr22:38735558|38735789 hsa-miR-3936 1 0 0
chr22:38735558|38735789 hsa-miR-4449 0 1 0
chr22:38735558|38735789 hsa-miR-4487 1 0 0
chr22:38735558|38735789 hsa-miR-4488 1 0 0
chr22:38735558|38735789 hsa-miR-4498 1 0 0
chr22:38735558|38735789 hsa-miR-4515 1 0 0
chr22:38735558|38735789 hsa-miR-4519 0 1 0
chr22:38735558|38735789 hsa-miR-4525 1 0 0
chr22:38735558|38735789 hsa-miR-1587 1 0 0
chr22:38735558|38735789 hsa-miR-4651 1 0 0
chr22:38735558|38735789 hsa-miR-4706 1 0 0
chr22:38735558|38735789 hsa-miR-4721 1 0 0
chr22:38735558|38735789 hsa-miR-4739 1 1 0
chr22:38735558|38735789 hsa-miR-4741 1 0 0
chr22:38735558|38735789 hsa-miR-6081 1 0 0
chr22:38735558|38735789 hsa-miR-8089 1 1 0
chr22:38735558|38735789 hsa-miR-12116 0 1 0
chr22:38735558|38735789 hsa-miR-134-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4433b-3p 1 0 0
chr22:38735558|38735789 hsa-miR-4731-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6825-5p 1 1 0
chr22:38735558|38735789 hsa-miR-6857-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4687-3p 1 0 0
chr22:38735558|38735789 hsa-miR-6799-5p 1 0 0
chr22:38735558|38735789 hsa-miR-3192-5p 1 1 0
chr22:38735558|38735789 hsa-miR-3064-5p 1 1 0
chr22:38735558|38735789 hsa-miR-6762-3p 1 0 0
chr22:38735558|38735789 hsa-miR-6806-5p 1 0 0
chr22:38735558|38735789 hsa-miR-3187-3p 1 1 0
chr22:38735558|38735789 hsa-miR-4655-5p 1 0 0
chr22:38735558|38735789 hsa-miR-197-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6716-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4725-5p 0 1 0
chr22:38735558|38735789 hsa-miR-6829-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6805-5p 1 0 0
chr22:38735558|38735789 hsa-miR-23a-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6798-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6786-5p 1 0 0
chr22:38735558|38735789 hsa-miR-1226-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6771-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4446-3p 1 0 0
chr22:38735558|38735789 hsa-miR-149-3p 1 1 0
chr22:38735558|38735789 hsa-miR-6824-5p 1 1 0
chr22:38735558|38735789 hsa-miR-3191-3p 1 0 0
chr22:38735558|38735789 hsa-miR-4652-5p 1 1 0
chr22:38735558|38735789 hsa-miR-3158-3p 1 1 0
chr22:38735558|38735789 hsa-miR-6508-3p 0 1 0
chr22:38735558|38735789 hsa-miR-6770-3p 1 0 0
chr22:38735558|38735789 hsa-miR-670-5p 0 1 0
chr22:38735558|38735789 hsa-miR-3675-5p 0 1 0
chr22:38735558|38735789 hsa-miR-371b-3p 0 1 0
chr22:38735558|38735789 hsa-miR-6732-3p 0 1 0
chr22:38735558|38735789 hsa-miR-18b-3p 0 1 0
chr22:38735558|38735789 hsa-miR-6865-5p 1 0 0
chr22:38735558|38735789 hsa-miR-5001-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6752-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6756-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6813-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6819-5p 1 0 0
chr22:38735558|38735789 hsa-miR-1249-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6779-5p 1 0 0
chr22:38735558|38735789 hsa-miR-7111-5p 1 0 0
chr22:38735558|38735789 hsa-miR-1915-3p 0 1 0
chr22:38735558|38735789 hsa-miR-3620-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4728-5p 0 1 0
chr22:38735558|38735789 hsa-miR-10526-3p 1 1 0
chr22:38735558|38735789 hsa-miR-328-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4632-5p 1 0 0
chr22:38735558|38735789 hsa-miR-4749-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6777-5p 1 1 0
chr22:38735558|38735789 hsa-miR-6794-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6846-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6848-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6883-5p 1 1 0
chr22:38735558|38735789 hsa-miR-939-5p 1 1 0
chr22:38735558|38735789 hsa-miR-365a-5p 1 0 0
chr22:38735558|38735789 hsa-miR-365b-5p 1 0 0
chr22:38735558|38735789 hsa-miR-6856-5p 1 0 0
chr22:38735558|38735789 hsa-miR-5008-3p 1 0 0
chr22:38735558|38735789 hsa-miR-4700-5p 0 1 0
chr22:38735558|38735789 hsa-miR-6785-5p 0 1 0
chr22:38735558|38735789 hsa-miR-3184-5p 0 1 0
chr22:38735558|38735789 hsa-miR-6762-5p 1 1 0
chr22:38735558|38735789 hsa-miR-6837-5p 0 1 0
chr22:38735558|38735789 hsa-miR-3085-3p 1 1 0
chr22:38735558|38735789 hsa-miR-6764-5p 0 1 0
chr22:38735558|38735789 hsa-miR-10395-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:38735558|38735789
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MAHCYPPRDKYTLLSKALRDPVVHASLGGGH
Nucleotide Sequence ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCAGGGACCCTGTGGTTCATGCTTCCCTAGGTGGAGGGCACTAA
CircID chr22:38735558|38735789
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MALGPLEDHSSQSPLGHKKPHGPLLPSPGQIHTFVEGPQGPCGSCFPRWRALTL
Nucleotide Sequence TTGGCCCTGGGCCCCTTAGAAGATCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCAGGGACCCTGTGGTTCATGCTTCCCTAGGTGGAGGGCACTAACCTTGTAG
CircID chr22:38735558|38735789
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MNHRVPEGLRQKCVFVPGRVAVGHGASCALKGTGCCDLLRGPGPTL
Nucleotide Sequence ATGAACCACAGGGTCCCTGAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGATCTTCTAAGGGGCCCAGGGCCAACCCTGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab