CircNet

General Information

circRNA Basic Information

CircID	chr22:38984088\|38985828
Strand	+
CircType	exon
Host Gene	ENSG00000179750.14;
Algorism	CIRI2;
Sequence	TGAGGCTTGAAATACACCTGGCCTCGAAAGACCCCTGTGTCCCAAAGGAGATTTGAGCGGCCCCTCTTTATTTTCACTTCATAGCACAGCCAAGTGTAGCTCCGACCATAGAGGATGGGTTCGTTTTCAAAGTTGTCGTAGAATGTGTCTCGATACATCCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr22:38984088\|38985828	hsa-miR-498-5p	0	0	1
chr22:38984088\|38985828	hsa-miR-498-3p	0	0	1
chr22:38984088\|38985828	hsa-miR-570-5p	0	0	1
chr22:38984088\|38985828	hsa-miR-570-3p	0	0	1
chr22:38984088\|38985828	hsa-miR-573	-6	0	1
chr22:38984088\|38985828	hsa-miR-583	-4	0	1
chr22:38984088\|38985828	hsa-miR-647	-6	0	1
chr22:38984088\|38985828	hsa-miR-1276	-5	0	1
chr22:38984088\|38985828	hsa-miR-193a-5p	-11	1	1
chr22:38984088\|38985828	hsa-miR-423-5p	-11	0	1
chr22:38984088\|38985828	hsa-miR-1302	-1	0	1
chr22:38984088\|38985828	hsa-miR-220c	0	0	1
chr22:38984088\|38985828	hsa-miR-549	0	0	1
chr22:38984088\|38985828	hsa-miR-3122	-10	1	0
chr22:38984088\|38985828	hsa-miR-5572	0	1	0
chr22:38984088\|38985828	hsa-miR-105-3p	0	1	0
chr22:38984088\|38985828	hsa-miR-6743-3p	-13	1	0
chr22:38984088\|38985828	hsa-miR-3184-5p	-14	1	0
chr22:38984088\|38985828	hsa-miR-642a-3p	-15	1	0
chr22:38984088\|38985828	hsa-miR-6504-5p	-13	1	0
chr22:38984088\|38985828	hsa-miR-549a-3p	-7	1	0
chr22:38984088\|38985828	hsa-miR-7157-3p	-10	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr22:38984088\|38985828
ORF Type	ORF1
Protein Length	25
Nucleotide Length	78
Protein Sequence	MKYTWPRKTPVSQRRFERPLFIFTS
Nucleotide Sequence	TTGAAATACACCTGGCCTCGAAAGACCCCTGTGTCCCAAAGGAGATTTGAGCGGCCCCTCTTTATTTTCACTTCATAG

CircID	chr22:38984088\|38985828
ORF Type	ORF2
Protein Length	42
Nucleotide Length	126
Protein Sequence	MCPKGDLSGPSLFSLHSTAKCSSDHRGWVRFQSCRRMCLDTS
Nucleotide Sequence	CTGTGTCCCAAAGGAGATTTGAGCGGCCCCTCTTTATTTTCACTTCATAGCACAGCCAAGTGTAGCTCCGACCATAGAGGATGGGTTCGTTTTCAAAGTTGTCGTAGAATGTGTCTCGATACATCC

CircID	chr22:38984088\|38985828
ORF Type	ORF3
Protein Length	52
Nucleotide Length	156
Protein Sequence	MYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGQVYFKP
Nucleotide Sequence	ATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACAGGGGTCTTTCGAGGCCAGGTGTATTTCAAGCCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information