CircRNA Information

General Information
circRNA Basic Information
CircID chr22:39018614|39018788
Strand -
CircType exon
Host Gene ENSG00000244509.3;
Algorism CIRI2;
Sequence AGACCCCGTTCCTCCAGCCTGCGTGCCCCTAACCTGGCTTTTCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATCCTAGGCTGGGCATGGTGACTCACGCCTGTAATCCCCCAGCAATTTGGGAGGCAAAGGTGGGAGAATCGCGTGAGCCCAGGAGTTCCAGACCAGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:39018614|39018788 hsa-miR-150-5p 0 0 1
chr22:39018614|39018788 hsa-miR-150-3p 0 0 1
chr22:39018614|39018788 hsa-miR-625-5p 0 0 1
chr22:39018614|39018788 hsa-miR-625-3p 0 0 1
chr22:39018614|39018788 hsa-miR-637 1 1 1
chr22:39018614|39018788 hsa-miR-659-5p 0 0 1
chr22:39018614|39018788 hsa-miR-659-3p 0 0 1
chr22:39018614|39018788 hsa-miR-765 0 0 1
chr22:39018614|39018788 hsa-miR-939-5p 0 0 1
chr22:39018614|39018788 hsa-miR-939-3p 0 0 1
chr22:39018614|39018788 hsa-miR-1299 0 1 1
chr22:39018614|39018788 hsa-miR-1255a 0 1 1
chr22:39018614|39018788 hsa-miR-1265 0 0 1
chr22:39018614|39018788 hsa-miR-1275 0 0 1
chr22:39018614|39018788 hsa-miR-302f 0 0 1
chr22:39018614|39018788 hsa-miR-532-3p 0 0 1
chr22:39018614|39018788 hsa-miR-1224-3p 0 1 1
chr22:39018614|39018788 hsa-miR-875-3p 0 0 1
chr22:39018614|39018788 hsa-miR-1260 0 0 1
chr22:39018614|39018788 hsa-miR-1280 0 0 1
chr22:39018614|39018788 hsa-miR-1255b 0 0 1
chr22:39018614|39018788 hsa-miR-608 1 0 0
chr22:39018614|39018788 hsa-miR-638 1 0 0
chr22:39018614|39018788 hsa-miR-762 1 0 0
chr22:39018614|39018788 hsa-miR-1260a 0 1 0
chr22:39018614|39018788 hsa-miR-3135a 0 1 0
chr22:39018614|39018788 hsa-miR-3147 1 0 0
chr22:39018614|39018788 hsa-miR-3153 1 1 0
chr22:39018614|39018788 hsa-miR-1260b 0 1 0
chr22:39018614|39018788 hsa-miR-3174 1 0 0
chr22:39018614|39018788 hsa-miR-3175 1 0 0
chr22:39018614|39018788 hsa-miR-3652 0 1 0
chr22:39018614|39018788 hsa-miR-4430 0 1 0
chr22:39018614|39018788 hsa-miR-3135b 0 1 0
chr22:39018614|39018788 hsa-miR-2392 1 0 0
chr22:39018614|39018788 hsa-miR-4516 1 0 0
chr22:39018614|39018788 hsa-miR-4525 1 1 0
chr22:39018614|39018788 hsa-miR-1587 1 0 0
chr22:39018614|39018788 hsa-miR-4688 1 1 0
chr22:39018614|39018788 hsa-miR-4689 1 0 0
chr22:39018614|39018788 hsa-miR-5572 1 0 0
chr22:39018614|39018788 hsa-miR-5787 1 1 0
chr22:39018614|39018788 hsa-miR-6085 1 0 0
chr22:39018614|39018788 hsa-miR-6086 1 0 0
chr22:39018614|39018788 hsa-miR-6088 1 0 0
chr22:39018614|39018788 hsa-miR-8085 1 0 0
chr22:39018614|39018788 hsa-miR-8089 1 1 0
chr22:39018614|39018788 hsa-miR-4731-5p 1 1 0
chr22:39018614|39018788 hsa-miR-6836-3p 1 0 0
chr22:39018614|39018788 hsa-miR-3150a-3p 1 1 0
chr22:39018614|39018788 hsa-miR-6861-5p 1 0 0
chr22:39018614|39018788 hsa-miR-7106-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6825-5p 1 1 0
chr22:39018614|39018788 hsa-miR-6894-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6857-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6799-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6728-5p 1 0 0
chr22:39018614|39018788 hsa-miR-766-5p 0 1 0
chr22:39018614|39018788 hsa-miR-5187-5p 1 0 0
chr22:39018614|39018788 hsa-miR-7114-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6757-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6746-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6727-5p 1 0 0
chr22:39018614|39018788 hsa-miR-3622b-5p 1 0 0
chr22:39018614|39018788 hsa-miR-197-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6716-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6871-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6798-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6881-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6810-5p 1 0 0
chr22:39018614|39018788 hsa-miR-4713-5p 1 1 0
chr22:39018614|39018788 hsa-miR-1343-3p 0 1 0
chr22:39018614|39018788 hsa-miR-1226-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6824-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6789-5p 1 1 0
chr22:39018614|39018788 hsa-miR-5010-5p 1 1 0
chr22:39018614|39018788 hsa-miR-3191-3p 1 0 0
chr22:39018614|39018788 hsa-miR-1225-5p 1 0 0
chr22:39018614|39018788 hsa-miR-629-3p 0 1 0
chr22:39018614|39018788 hsa-miR-6782-3p 1 1 0
chr22:39018614|39018788 hsa-miR-1229-3p 0 1 0
chr22:39018614|39018788 hsa-miR-6759-3p 0 1 0
chr22:39018614|39018788 hsa-miR-6812-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6816-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6870-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6893-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6775-5p 0 1 0
chr22:39018614|39018788 hsa-miR-1343-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6726-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6743-5p 1 1 0
chr22:39018614|39018788 hsa-miR-6756-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6769a-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6813-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6851-5p 1 0 0
chr22:39018614|39018788 hsa-miR-11181-3p 1 0 0
chr22:39018614|39018788 hsa-miR-6763-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6797-5p 1 0 0
chr22:39018614|39018788 hsa-miR-7111-5p 1 0 0
chr22:39018614|39018788 hsa-miR-3620-5p 1 0 0
chr22:39018614|39018788 hsa-miR-4728-5p 1 0 0
chr22:39018614|39018788 hsa-miR-5196-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6862-5p 1 0 0
chr22:39018614|39018788 hsa-miR-328-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6795-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6846-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6848-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6887-5p 1 0 0
chr22:39018614|39018788 hsa-miR-6885-5p 1 0 0
chr22:39018614|39018788 hsa-miR-10394-3p 1 0 0
chr22:39018614|39018788 hsa-miR-6511b-5p 1 0 0
chr22:39018614|39018788 hsa-miR-4665-5p 1 1 0
chr22:39018614|39018788 hsa-miR-7151-3p 1 0 0
chr22:39018614|39018788 hsa-miR-4700-5p 0 1 0
chr22:39018614|39018788 hsa-miR-4646-5p 1 0 0
chr22:39018614|39018788 hsa-miR-4667-5p 1 1 0
chr22:39018614|39018788 hsa-miR-6783-3p 0 1 0
chr22:39018614|39018788 hsa-miR-619-5p 0 1 0
chr22:39018614|39018788 hsa-miR-1255b-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:39018614|39018788
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MGMVTHACNPPAIWEAKVGESREPRSSRP
Nucleotide Sequence CTGGGCATGGTGACTCACGCCTGTAATCCCCCAGCAATTTGGGAGGCAAAGGTGGGAGAATCGCGTGAGCCCAGGAGTTCCAGACCA
CircID chr22:39018614|39018788
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence LVWNSWAHAILPPLPPKLLGDYRRESPCPA
Nucleotide Sequence CTGGTCTGGAACTCCTGGGCTCACGCGATTCTCCCACCTTTGCCTCCCAAATTGCTGGGGGATTACAGGCGTGAGTCACCATGCCCAGCCTAG
CircID chr22:39018614|39018788
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MSLVRFGYAGEMGKARLGARRLEERG
Nucleotide Sequence ATGAGTTTAGTAAGATTTGGTTATGCTGGGGAGATGGGAAAAGCCAGGTTAGGGGCACGCAGGCTGGAGGAACGGGGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab