CircNet

General Information

circRNA Basic Information

CircID	chr22:39480258\|39480376
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	AGAGATTAGCCTTGGTGGTGGGAAGGAGCTGGAGAGGGGTTTTGTCCTCAGAGAGCTGCCTGCCTGGGTCACAGAGGGCGCCCAGCCCAGGGAAGGCCCTAAGCCCTCGCTCAGTTAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr22:39480258\|39480376	hsa-miR-216a-5p	0	0	1
chr22:39480258\|39480376	hsa-miR-216a-3p	0	0	1
chr22:39480258\|39480376	hsa-miR-1296-5p	0	0	1
chr22:39480258\|39480376	hsa-miR-1296-3p	0	0	1
chr22:39480258\|39480376	hsa-miR-766-5p	0	0	1
chr22:39480258\|39480376	hsa-miR-766-3p	0	0	1
chr22:39480258\|39480376	hsa-miR-216b-5p	0	0	1
chr22:39480258\|39480376	hsa-miR-216b-3p	0	0	1
chr22:39480258\|39480376	hsa-miR-940	0	0	1
chr22:39480258\|39480376	hsa-miR-1224-5p	0	0	1
chr22:39480258\|39480376	hsa-miR-1224-3p	0	0	1
chr22:39480258\|39480376	hsa-miR-188-3p	0	0	1
chr22:39480258\|39480376	hsa-miR-220b	0	0	1
chr22:39480258\|39480376	hsa-miR-1260	0	0	1
chr22:39480258\|39480376	hsa-miR-1274a	0	0	1
chr22:39480258\|39480376	hsa-miR-1280	0	0	1
chr22:39480258\|39480376	hsa-miR-612	0	1	0
chr22:39480258\|39480376	hsa-miR-650	1	0	0
chr22:39480258\|39480376	hsa-miR-762	1	1	0
chr22:39480258\|39480376	hsa-miR-1260b	0	1	0
chr22:39480258\|39480376	hsa-miR-4292	0	1	0
chr22:39480258\|39480376	hsa-miR-3921	0	1	0
chr22:39480258\|39480376	hsa-miR-378g	0	1	0
chr22:39480258\|39480376	hsa-miR-4486	0	1	0
chr22:39480258\|39480376	hsa-miR-4492	0	1	0
chr22:39480258\|39480376	hsa-miR-1587	0	1	0
chr22:39480258\|39480376	hsa-miR-4660	0	1	0
chr22:39480258\|39480376	hsa-miR-4673	0	1	0
chr22:39480258\|39480376	hsa-miR-4692	0	1	0
chr22:39480258\|39480376	hsa-miR-9899	0	1	0
chr22:39480258\|39480376	hsa-miR-6892-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-27a-5p	0	1	0
chr22:39480258\|39480376	hsa-miR-6806-5p	1	0	0
chr22:39480258\|39480376	hsa-miR-5589-5p	0	1	0
chr22:39480258\|39480376	hsa-miR-7108-5p	1	1	0
chr22:39480258\|39480376	hsa-miR-185-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-4713-5p	1	0	0
chr22:39480258\|39480376	hsa-miR-532-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-939-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-6736-3p	1	1	0
chr22:39480258\|39480376	hsa-miR-937-5p	1	0	0
chr22:39480258\|39480376	hsa-miR-6769a-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-2276-5p	0	1	0
chr22:39480258\|39480376	hsa-miR-6795-3p	1	0	0
chr22:39480258\|39480376	hsa-miR-6734-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-5001-5p	1	0	0
chr22:39480258\|39480376	hsa-miR-3620-5p	1	1	0
chr22:39480258\|39480376	hsa-miR-4649-5p	1	1	0
chr22:39480258\|39480376	hsa-miR-6729-5p	1	0	0
chr22:39480258\|39480376	hsa-miR-6791-5p	1	1	0
chr22:39480258\|39480376	hsa-miR-4723-3p	1	1	0
chr22:39480258\|39480376	hsa-miR-7114-3p	1	0	0
chr22:39480258\|39480376	hsa-miR-6783-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-6771-3p	0	1	0
chr22:39480258\|39480376	hsa-miR-4653-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr22:39480258\|39480376
ORF Type	ORF1
Protein Length	29
Nucleotide Length	90
Protein Sequence	MERGFVLRELPAWVTEGAQPREGPKPSLS
Nucleotide Sequence	CTGGAGAGGGGTTTTGTCCTCAGAGAGCTGCCTGCCTGGGTCACAGAGGGCGCCCAGCCCAGGGAAGGCCCTAAGCCCTCGCTCAGTTAA

CircID	chr22:39480258\|39480376
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MVVGRSWRGVLSSESCLPGSQRAPSPGKALSPRSVN
Nucleotide Sequence	TTGGTGGTGGGAAGGAGCTGGAGAGGGGTTTTGTCCTCAGAGAGCTGCCTGCCTGGGTCACAGAGGGCGCCCAGCCCAGGGAAGGCCCTAAGCCCTCGCTCAGTTAAC

CircID	chr22:39480258\|39480376
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MGALCDPGRQLSEDKTPLQLLPTTKANL
Nucleotide Sequence	CTGGGCGCCCTCTGTGACCCAGGCAGGCAGCTCTCTGAGGACAAAACCCCTCTCCAGCTCCTTCCCACCACCAAGGCTAATCTC

CircID	chr22:39480258\|39480376
ORF Type	ORF4
Protein Length	38
Nucleotide Length	114
Protein Sequence	MSEGLGPSLGWAPSVTQAGSSLRTKPLSSSFPPPRLIS
Nucleotide Sequence	CTGAGCGAGGGCTTAGGGCCTTCCCTGGGCTGGGCGCCCTCTGTGACCCAGGCAGGCAGCTCTCTGAGGACAAAACCCCTCTCCAGCTCCTTCCCACCACCAAGGCTAATCTCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information