CircRNA Information

General Information
circRNA Basic Information
CircID chr22:39521792|39521975
Strand -
CircType exon
Host Gene ENSG00000128272.13;
Algorism CIRI2;
Sequence AGATTGGATGTTGGAGAAAATGGATTTGAAGGAGTTCGACTTGGATGCCCTGTTGGGTATAGATGACCTGGAAACCATGCCAGATGACCTTCTGACCACGTTGGATGACACTTGTGATCTCTTTGCCCCCCTAGTCCAGGAGACTAATAAGCAGCCCCCCCAGACGGTGAACCCAATTGGCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:39521792|39521975 hsa-miR-205-5p 0 0 1
chr22:39521792|39521975 hsa-miR-205-3p 0 0 1
chr22:39521792|39521975 hsa-miR-422a 0 1 1
chr22:39521792|39521975 hsa-miR-493-5p 0 0 1
chr22:39521792|39521975 hsa-miR-493-3p 0 0 1
chr22:39521792|39521975 hsa-miR-607 0 1 1
chr22:39521792|39521975 hsa-miR-637 1 0 1
chr22:39521792|39521975 hsa-miR-1284 0 0 1
chr22:39521792|39521975 hsa-miR-513b-5p 0 0 1
chr22:39521792|39521975 hsa-miR-513b-3p 0 0 1
chr22:39521792|39521975 hsa-miR-515-5p 0 0 1
chr22:39521792|39521975 hsa-miR-378 0 0 1
chr22:39521792|39521975 hsa-miR-638 1 0 0
chr22:39521792|39521975 hsa-miR-762 1 0 0
chr22:39521792|39521975 hsa-miR-1231 1 1 0
chr22:39521792|39521975 hsa-miR-378b 0 1 0
chr22:39521792|39521975 hsa-miR-378c 0 1 0
chr22:39521792|39521975 hsa-miR-378f 0 1 0
chr22:39521792|39521975 hsa-miR-378h 0 1 0
chr22:39521792|39521975 hsa-miR-4488 1 0 0
chr22:39521792|39521975 hsa-miR-4507 1 0 0
chr22:39521792|39521975 hsa-miR-378i 0 1 0
chr22:39521792|39521975 hsa-miR-4656 1 0 0
chr22:39521792|39521975 hsa-miR-4741 1 0 0
chr22:39521792|39521975 hsa-miR-6085 1 0 0
chr22:39521792|39521975 hsa-miR-8089 1 0 0
chr22:39521792|39521975 hsa-miR-4687-3p 1 0 0
chr22:39521792|39521975 hsa-miR-6762-3p 1 1 0
chr22:39521792|39521975 hsa-miR-3187-3p 1 0 0
chr22:39521792|39521975 hsa-miR-3151-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6793-5p 1 0 0
chr22:39521792|39521975 hsa-miR-185-3p 1 0 0
chr22:39521792|39521975 hsa-miR-6829-5p 1 1 0
chr22:39521792|39521975 hsa-miR-23a-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6881-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6835-5p 1 0 0
chr22:39521792|39521975 hsa-miR-423-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6801-5p 0 1 0
chr22:39521792|39521975 hsa-miR-6513-3p 0 1 0
chr22:39521792|39521975 hsa-miR-3126-3p 0 1 0
chr22:39521792|39521975 hsa-miR-431-3p 1 1 0
chr22:39521792|39521975 hsa-miR-6503-3p 0 1 0
chr22:39521792|39521975 hsa-miR-6737-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6803-5p 1 0 0
chr22:39521792|39521975 hsa-miR-1237-5p 1 0 0
chr22:39521792|39521975 hsa-miR-328-5p 1 1 0
chr22:39521792|39521975 hsa-miR-4649-5p 1 0 0
chr22:39521792|39521975 hsa-miR-4685-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6735-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6738-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6795-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6846-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6848-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6887-5p 1 0 0
chr22:39521792|39521975 hsa-miR-4697-5p 1 0 0
chr22:39521792|39521975 hsa-miR-6885-5p 1 1 0
chr22:39521792|39521975 hsa-miR-939-5p 1 0 0
chr22:39521792|39521975 hsa-miR-3940-5p 1 0 0
chr22:39521792|39521975 hsa-miR-378a-3p 0 1 0
chr22:39521792|39521975 hsa-miR-4472 1 0 0
chr22:39521792|39521975 hsa-miR-4731-3p 0 1 0
chr22:39521792|39521975 hsa-miR-6529-5p 0 1 0
chr22:39521792|39521975 hsa-miR-10400-3p 1 0 0
chr22:39521792|39521975 hsa-miR-6718-5p 1 1 0
chr22:39521792|39521975 hsa-miR-4799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:39521792|39521975
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTCDLFAPLVQETNKQPPQTVNPIGH
Nucleotide Sequence ATGTTGGAGAAAATGGATTTGAAGGAGTTCGACTTGGATGCCCTGTTGGGTATAGATGACCTGGAAACCATGCCAGATGACCTTCTGACCACGTTGGATGACACTTGTGATCTCTTTGCCCCCCTAGTCCAGGAGACTAATAAGCAGCCCCCCCAGACGGTGAACCCAATTGGCCAT

CircID chr22:39521792|39521975
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MVSRSSIPNRASKSNSFKSIFSNIQS
Nucleotide Sequence ATGGTTTCCAGGTCATCTATACCCAACAGGGCATCCAAGTCGAACTCCTTCAAATCCATTTTCTCCAACATCCAATCT

CircID chr22:39521792|39521975
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MAWFPGHLYPTGHPSRTPSNPFSPTSN
Nucleotide Sequence CTGGCATGGTTTCCAGGTCATCTATACCCAACAGGGCATCCAAGTCGAACTCCTTCAAATCCATTTTCTCCAACATCCAAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites