CircNet

General Information

circRNA Basic Information

CircID	chr22:41125864\|41137790
Strand	+
CircType	exon
Host Gene	ENSG00000100393.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGGGAATGATGAACAACCCCAATCCTTATGGTTCACCATATACTCAGAATCCTGGACAGCAGATTGGAGCCAGTGGCCTTGGTCTCCAGATTCAGACAAAAACTGTACTATCAAATAACTTATCTCCATTTGCTATGGACAAAAAGGCAGTTCCTGGTGGAGGAATGCCCAACATGCCCAATGATGAGTGAAAATGCCAGTGTGCCCTCCCTGGGTCCTATGCCAACAGCAGCTCAACCATCCACTACTGGAATTCGGAAACAGTGGCACGAAGATATTACTCAGGATCTTCGAAATCATCTTGTTCACAAACT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr22:41125864\|41137790	hsa-miR-149-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr22:41125864\|41137790
ORF Type	ORF1
Protein Length	95
Nucleotide Length	285
Protein Sequence	MVHHILRILDSRLEPVALVSRFRQKLYYQITYLHLLWTKRQFLVEECPTCPMMSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHK
Nucleotide Sequence	ATGGTTCACCATATACTCAGAATCCTGGACAGCAGATTGGAGCCAGTGGCCTTGGTCTCCAGATTCAGACAAAAACTGTACTATCAAATAACTTATCTCCATTTGCTATGGACAAAAAGGCAGTTCCTGGTGGAGGAATGCCCAACATGCCCAATGATGAGTGAAAATGCCAGTGTGCCCTCCCTGGGTCCTATGCCAACAGCAGCTCAACCATCCACTACTGGAATTCGGAAACAGTGGCACGAAGATATTACTCAGGATCTTCGAAATCATCTTGTTCACAAA

CircID	chr22:41125864\|41137790
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MGMMNNPNPYGSPYTQNPGQQIGASGLGLQIQTKTVLSNNLSPFAMDKKAVPGGGMPNMPNDE*
Nucleotide Sequence	ATGGGAATGATGAACAACCCCAATCCTTATGGTTCACCATATACTCAGAATCCTGGACAGCAGATTGGAGCCAGTGGCCTTGGTCTCCAGATTCAGACAAAAACTGTACTATCAAATAACTTATCTCCATTTGCTATGGACAAAAAGGCAGTTCCTGGTGGAGGAATGCCCAACATGCCCAATGATGAGTGA

CircID	chr22:41125864\|41137790
ORF Type	ORF3
Protein Length	56
Nucleotide Length	168
Protein Sequence	MISKILSNIFVPLFPNSSSGWLSCCWHRTQGGHTGIFTHHWACWAFLHQELPFCP*
Nucleotide Sequence	ATGATTTCGAAGATCCTGAGTAATATCTTCGTGCCACTGTTTCCGAATTCCAGTAGTGGATGGTTGAGCTGCTGTTGGCATAGGACCCAGGGAGGGCACACTGGCATTTTCACTCATCATTGGGCATGTTGGGCATTCCTCCACCAGGAACTGCCTTTTTGTCCATAG

CircID	chr22:41125864\|41137790
ORF Type	ORF4
Protein Length	43
Nucleotide Length	129
Protein Sequence	MEISYLIVQFLSESGDQGHWLQSAVQDSEYMVNHKDWGCSSFP
Nucleotide Sequence	ATGGAGATAAGTTATTTGATAGTACAGTTTTTGTCTGAATCTGGAGACCAAGGCCACTGGCTCCAATCTGCTGTCCAGGATTCTGAGTATATGGTGAACCATAAGGATTGGGGTTGTTCATCATTCCCA

CircID	chr22:41125864\|41137790
ORF Type	ORF5
Protein Length	40
Nucleotide Length	120
Protein Sequence	MPVCPPWVLCQQQLNHPLLEFGNSGTKILLRIFEIILFTN
Nucleotide Sequence	ATGCCAGTGTGCCCTCCCTGGGTCCTATGCCAACAGCAGCTCAACCATCCACTACTGGAATTCGGAAACAGTGGCACGAAGATATTACTCAGGATCTTCGAAATCATCTTGTTCACAAAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr22:41125864\|41137790	NOP56	1	1	2
chr22:41125864\|41137790	ELAVL1	10	7	1
chr22:41125864\|41137790	PRPF8	0	1	0
chr22:41125864\|41137790	PUM2	0	0	1
chr22:41125864\|41137790	CPSF7	1	1	0
chr22:41125864\|41137790	UPF1	1	0	0
chr22:41125864\|41137790	FMR1	0	0	10
chr22:41125864\|41137790	CPSF6	0	2	0
chr22:41125864\|41137790	NUDT21	1	1	0
chr22:41125864\|41137790	CSTF2	2	1	0
chr22:41125864\|41137790	DGCR8	0	2	0
chr22:41125864\|41137790	SRSF1	1	0	1
chr22:41125864\|41137790	NOP58	0	2	5
chr22:41125864\|41137790	U2AF1	1	0	0
chr22:41125864\|41137790	U2AF2	9	11	4
chr22:41125864\|41137790	DDX54	1	1	11
chr22:41125864\|41137790	RBM10	1	2	0
chr22:41125864\|41137790	FIP1L1	1	1	0
chr22:41125864\|41137790	PTBP1	2	2	3
chr22:41125864\|41137790	HNRNPC	34	47	0
chr22:41125864\|41137790	HNRNPD	1	0	0
chr22:41125864\|41137790	DHX9	1	0	0
chr22:41125864\|41137790	HNRNPA1	2	1	0
chr22:41125864\|41137790	DDX3X	1	0	0
chr22:41125864\|41137790	YTHDC1	0	1	0
chr22:41125864\|41137790	SMNDC1	0	0	1
chr22:41125864\|41137790	ACIN1	0	0	1
chr22:41125864\|41137790	LIN28B	2	0	0
chr22:41125864\|41137790	FXR1	0	0	2
chr22:41125864\|41137790	FXR2	0	0	4
chr22:41125864\|41137790	IGF2BP1	0	0	7
chr22:41125864\|41137790	IGF2BP3	0	1	2
chr22:41125864\|41137790	IGF2BP2	0	2	10
chr22:41125864\|41137790	TARDBP	2	2	0
chr22:41125864\|41137790	STAU1	0	1	0
chr22:41125864\|41137790	KHSRP	1	0	0
chr22:41125864\|41137790	RBM47	1	1	2
chr22:41125864\|41137790	CSTF2T	2	2	3
chr22:41125864\|41137790	RBFOX2	1	0	0
chr22:41125864\|41137790	WDR33	3	0	0
chr22:41125864\|41137790	AGO2	0	0	5
chr22:41125864\|41137790	ATXN2	1	0	0
chr22:41125864\|41137790	EIF4A3	1	2	4
chr22:41125864\|41137790	FBL	0	2	3

CircRNA Information