CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41178358|41178471
Strand +
CircType exon
Host Gene ENSG00000100393.9;
Algorism CIRI2;
Sequence CTGCCTCTGCTCCCAAGGCCTGGGGAAGCTGGCCTATCTGTCCCATATTTCCTTGTTGCATCTGTTGCATGTGATGCTGCATCCGCTGCTGCTGCTGTGGTGGGTAGCCAACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41178358|41178471 hsa-miR-15a-5p 0 0 1
chr22:41178358|41178471 hsa-miR-15a-3p 0 0 1
chr22:41178358|41178471 hsa-miR-107 0 0 1
chr22:41178358|41178471 hsa-miR-15b-5p 0 0 1
chr22:41178358|41178471 hsa-miR-15b-3p 0 0 1
chr22:41178358|41178471 hsa-miR-195-5p 0 0 1
chr22:41178358|41178471 hsa-miR-195-3p 0 0 1
chr22:41178358|41178471 hsa-miR-424-5p 0 0 1
chr22:41178358|41178471 hsa-miR-424-3p 0 0 1
chr22:41178358|41178471 hsa-miR-497-5p 0 0 1
chr22:41178358|41178471 hsa-miR-497-3p 0 0 1
chr22:41178358|41178471 hsa-miR-503-5p 0 0 1
chr22:41178358|41178471 hsa-miR-503-3p 0 0 1
chr22:41178358|41178471 hsa-miR-571 0 0 1
chr22:41178358|41178471 hsa-miR-920 0 0 1
chr22:41178358|41178471 hsa-miR-1827 0 0 1
chr22:41178358|41178471 hsa-miR-140-3p 0 1 1
chr22:41178358|41178471 hsa-miR-1302 0 0 1
chr22:41178358|41178471 hsa-miR-103 0 0 1
chr22:41178358|41178471 hsa-miR-16 0 0 1
chr22:41178358|41178471 hsa-miR-298 1 0 0
chr22:41178358|41178471 hsa-miR-4298 1 1 0
chr22:41178358|41178471 hsa-miR-4462 1 0 0
chr22:41178358|41178471 hsa-miR-4476 1 0 0
chr22:41178358|41178471 hsa-miR-5090 1 0 0
chr22:41178358|41178471 hsa-miR-5093 1 0 0
chr22:41178358|41178471 hsa-miR-5704 0 1 0
chr22:41178358|41178471 hsa-miR-6081 0 1 0
chr22:41178358|41178471 hsa-miR-12120 1 0 0
chr22:41178358|41178471 hsa-miR-1972 1 0 0
chr22:41178358|41178471 hsa-miR-6089 1 0 0
chr22:41178358|41178471 hsa-miR-3126-5p 1 0 0
chr22:41178358|41178471 hsa-miR-2467-3p 0 1 0
chr22:41178358|41178471 hsa-miR-4640-5p 1 0 0
chr22:41178358|41178471 hsa-miR-6749-5p 1 0 0
chr22:41178358|41178471 hsa-miR-4743-5p 1 0 0
chr22:41178358|41178471 hsa-miR-6830-5p 0 1 0
chr22:41178358|41178471 hsa-miR-4715-5p 0 1 0
chr22:41178358|41178471 hsa-miR-1295b-3p 0 1 0
chr22:41178358|41178471 hsa-miR-1909-3p 1 0 0
chr22:41178358|41178471 hsa-miR-4632-5p 1 0 0
chr22:41178358|41178471 hsa-miR-4685-5p 1 0 0
chr22:41178358|41178471 hsa-miR-4726-5p 1 0 0
chr22:41178358|41178471 hsa-miR-7843-5p 1 0 0
chr22:41178358|41178471 hsa-miR-3173-3p 1 0 0
chr22:41178358|41178471 hsa-miR-6724-5p 1 0 0
chr22:41178358|41178471 hsa-miR-4691-5p 1 0 0
chr22:41178358|41178471 hsa-miR-3619-5p 1 0 0
chr22:41178358|41178471 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:41178358|41178471
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence LPLLPRPGEAGLSVPYFLVASVACDAASAAAAVVGSQL
Nucleotide Sequence CTGCCTCTGCTCCCAAGGCCTGGGGAAGCTGGCCTATCTGTCCCATATTTCCTTGTTGCATCTGTTGCATGTGATGCTGCATCCGCTGCTGCTGCTGTGGTGGGTAGCCAACTC

CircID chr22:41178358|41178471
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MGKLAYLSHISLLHLLHVMLHPLLLLWWVAN
Nucleotide Sequence CTGGGGAAGCTGGCCTATCTGTCCCATATTTCCTTGTTGCATCTGTTGCATGTGATGCTGCATCCGCTGCTGCTGCTGTGGTGGGTAGCCAAC

CircID chr22:41178358|41178471
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MATHHSSSSGCSITCNRCNKEIWDR
Nucleotide Sequence TTGGCTACCCACCACAGCAGCAGCAGCGGATGCAGCATCACATGCAACAGATGCAACAAGGAAATATGGGACAGATAG

CircID chr22:41178358|41178471
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MQHHMQQMQQGNMGQIGQLPQALGAEA
Nucleotide Sequence ATGCAGCATCACATGCAACAGATGCAACAAGGAAATATGGGACAGATAGGCCAGCTTCCCCAGGCCTTGGGAGCAGAGGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites