CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41245623|41245740
Strand -
CircType exon
Host Gene ENSG00000100401.18;
Algorism CIRI2;
Sequence ACGACTTTATTTGTGAAGCCCCCGGGCACAGCCCAGACACACACAGAGCACAAAGGGGAAAGCATGGGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41245623|41245740 hsa-miR-134-5p 0 0 1
chr22:41245623|41245740 hsa-miR-134-3p 0 0 1
chr22:41245623|41245740 hsa-miR-422a 0 1 1
chr22:41245623|41245740 hsa-miR-612 1 1 1
chr22:41245623|41245740 hsa-miR-1231 0 1 1
chr22:41245623|41245740 hsa-miR-1288-5p 0 0 1
chr22:41245623|41245740 hsa-miR-1288-3p 0 0 1
chr22:41245623|41245740 hsa-miR-513b-5p 0 0 1
chr22:41245623|41245740 hsa-miR-513b-3p 0 0 1
chr22:41245623|41245740 hsa-miR-142-5p 0 0 1
chr22:41245623|41245740 hsa-miR-324-3p 0 0 1
chr22:41245623|41245740 hsa-miR-125a-5p 0 1 1
chr22:41245623|41245740 hsa-miR-125b 0 0 1
chr22:41245623|41245740 hsa-miR-378 0 0 1
chr22:41245623|41245740 hsa-miR-1269 0 0 1
chr22:41245623|41245740 hsa-miR-1285 0 0 1
chr22:41245623|41245740 hsa-miR-218 0 0 1
chr22:41245623|41245740 hsa-miR-346 1 0 0
chr22:41245623|41245740 hsa-miR-762 1 0 0
chr22:41245623|41245740 hsa-miR-1269a 0 1 0
chr22:41245623|41245740 hsa-miR-1913 1 0 0
chr22:41245623|41245740 hsa-miR-378b 0 1 0
chr22:41245623|41245740 hsa-miR-378c 0 1 0
chr22:41245623|41245740 hsa-miR-4319 0 1 0
chr22:41245623|41245740 hsa-miR-378f 0 1 0
chr22:41245623|41245740 hsa-miR-378h 1 1 0
chr22:41245623|41245740 hsa-miR-4492 1 0 0
chr22:41245623|41245740 hsa-miR-4498 1 0 0
chr22:41245623|41245740 hsa-miR-4505 1 0 0
chr22:41245623|41245740 hsa-miR-4515 1 0 0
chr22:41245623|41245740 hsa-miR-1269b 0 1 0
chr22:41245623|41245740 hsa-miR-378i 0 1 0
chr22:41245623|41245740 hsa-miR-1587 1 1 0
chr22:41245623|41245740 hsa-miR-4539 1 0 0
chr22:41245623|41245740 hsa-miR-4741 0 1 0
chr22:41245623|41245740 hsa-miR-6860 1 1 0
chr22:41245623|41245740 hsa-miR-18a-3p 1 0 0
chr22:41245623|41245740 hsa-miR-6861-5p 1 0 0
chr22:41245623|41245740 hsa-miR-3189-5p 1 1 0
chr22:41245623|41245740 hsa-miR-4728-3p 1 0 0
chr22:41245623|41245740 hsa-miR-3180-3p 1 0 0
chr22:41245623|41245740 hsa-miR-7113-3p 0 1 0
chr22:41245623|41245740 hsa-miR-1228-5p 1 0 0
chr22:41245623|41245740 hsa-miR-4446-3p 1 0 0
chr22:41245623|41245740 hsa-miR-4740-5p 1 0 0
chr22:41245623|41245740 hsa-miR-6871-3p 0 1 0
chr22:41245623|41245740 hsa-miR-4529-3p 1 0 0
chr22:41245623|41245740 hsa-miR-670-5p 0 1 0
chr22:41245623|41245740 hsa-miR-5002-3p 0 1 0
chr22:41245623|41245740 hsa-miR-6503-3p 1 0 0
chr22:41245623|41245740 hsa-miR-5001-5p 1 0 0
chr22:41245623|41245740 hsa-miR-3620-5p 1 1 0
chr22:41245623|41245740 hsa-miR-5189-5p 0 1 0
chr22:41245623|41245740 hsa-miR-6846-5p 0 1 0
chr22:41245623|41245740 hsa-miR-3187-5p 0 1 0
chr22:41245623|41245740 hsa-miR-7843-5p 1 0 0
chr22:41245623|41245740 hsa-miR-378a-3p 0 1 0
chr22:41245623|41245740 hsa-miR-3085-3p 1 0 0
chr22:41245623|41245740 hsa-miR-378d 0 1 0
chr22:41245623|41245740 hsa-miR-3118 0 1 0
chr22:41245623|41245740 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:41245623|41245740
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MGRCCMTSLSTRDCPMLSPLCSVCVWAVPGGFTNKV
Nucleotide Sequence CTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCCCATGCTTTCCCCTTTGTGCTCTGTGTGTGTCTGGGCTGTGCCCGGGGGCTTCACAAATAAAGTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites