CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41357810|41357988
Strand +
CircType exon
Host Gene ENSG00000100403.11;
Algorism CIRI2;
Sequence CTCCTCCCAGCCTTCCGGAGGGAAAGCTGAGGCCCCAGAGGGTAAGTGGCCAGTACAGTGTTCCCAGCTCCAACCTGGGGCTACATTTTAAAGCTAATGGGGCCTCTGCCCTCTGTTGTGTCCTGATTTGCCCCCAGGGGGAGGGGGTGGGAGGAGGACGGGCCAGGGAGAGAAGGACC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41357810|41357988 hsa-miR-141-5p 0 0 1
chr22:41357810|41357988 hsa-miR-141-3p 0 0 1
chr22:41357810|41357988 hsa-miR-200a-5p 0 0 1
chr22:41357810|41357988 hsa-miR-200a-3p 0 0 1
chr22:41357810|41357988 hsa-miR-326 0 1 1
chr22:41357810|41357988 hsa-miR-193b-5p 0 0 1
chr22:41357810|41357988 hsa-miR-193b-3p 0 0 1
chr22:41357810|41357988 hsa-miR-588 0 0 1
chr22:41357810|41357988 hsa-miR-637 1 1 1
chr22:41357810|41357988 hsa-miR-765 0 0 1
chr22:41357810|41357988 hsa-miR-892b 0 0 1
chr22:41357810|41357988 hsa-miR-942-5p 0 0 1
chr22:41357810|41357988 hsa-miR-942-3p 0 0 1
chr22:41357810|41357988 hsa-miR-1237-5p 0 0 1
chr22:41357810|41357988 hsa-miR-1237-3p 0 0 1
chr22:41357810|41357988 hsa-miR-1247-5p 0 0 1
chr22:41357810|41357988 hsa-miR-1247-3p 0 0 1
chr22:41357810|41357988 hsa-miR-1248 0 0 1
chr22:41357810|41357988 hsa-miR-1292-5p 0 0 1
chr22:41357810|41357988 hsa-miR-1292-3p 0 0 1
chr22:41357810|41357988 hsa-miR-1197 0 0 1
chr22:41357810|41357988 hsa-miR-532-3p 0 1 1
chr22:41357810|41357988 hsa-miR-1224-3p 0 1 1
chr22:41357810|41357988 hsa-miR-331-3p 0 0 1
chr22:41357810|41357988 hsa-miR-330-5p 0 1 1
chr22:41357810|41357988 hsa-miR-193a-3p 0 0 1
chr22:41357810|41357988 hsa-miR-1260 0 0 1
chr22:41357810|41357988 hsa-miR-1280 0 0 1
chr22:41357810|41357988 hsa-miR-642 0 0 1
chr22:41357810|41357988 hsa-miR-638 1 0 0
chr22:41357810|41357988 hsa-miR-762 1 0 0
chr22:41357810|41357988 hsa-miR-1260a 0 1 0
chr22:41357810|41357988 hsa-miR-1260b 0 1 0
chr22:41357810|41357988 hsa-miR-4436a 0 1 0
chr22:41357810|41357988 hsa-miR-4488 1 0 0
chr22:41357810|41357988 hsa-miR-5193 0 1 0
chr22:41357810|41357988 hsa-miR-6090 1 0 0
chr22:41357810|41357988 hsa-miR-6125 0 1 0
chr22:41357810|41357988 hsa-miR-8082 1 1 0
chr22:41357810|41357988 hsa-miR-8089 1 1 0
chr22:41357810|41357988 hsa-miR-6749-3p 0 1 0
chr22:41357810|41357988 hsa-miR-4726-3p 1 1 0
chr22:41357810|41357988 hsa-miR-136-5p 0 1 0
chr22:41357810|41357988 hsa-miR-6892-3p 1 0 0
chr22:41357810|41357988 hsa-miR-6089 1 0 0
chr22:41357810|41357988 hsa-miR-3189-5p 1 0 0
chr22:41357810|41357988 hsa-miR-6787-3p 0 1 0
chr22:41357810|41357988 hsa-miR-877-3p 1 1 0
chr22:41357810|41357988 hsa-miR-185-3p 1 0 0
chr22:41357810|41357988 hsa-miR-6868-3p 0 1 0
chr22:41357810|41357988 hsa-miR-2467-5p 0 1 0
chr22:41357810|41357988 hsa-miR-486-3p 0 1 0
chr22:41357810|41357988 hsa-miR-6874-5p 0 1 0
chr22:41357810|41357988 hsa-miR-6735-3p 0 1 0
chr22:41357810|41357988 hsa-miR-6852-5p 0 1 0
chr22:41357810|41357988 hsa-miR-7113-3p 1 1 0
chr22:41357810|41357988 hsa-miR-3191-5p 1 1 0
chr22:41357810|41357988 hsa-miR-7111-3p 0 1 0
chr22:41357810|41357988 hsa-miR-6830-3p 0 1 0
chr22:41357810|41357988 hsa-miR-4667-3p 0 1 0
chr22:41357810|41357988 hsa-miR-4640-3p 0 1 0
chr22:41357810|41357988 hsa-miR-1236-3p 0 1 0
chr22:41357810|41357988 hsa-miR-6813-3p 1 0 0
chr22:41357810|41357988 hsa-miR-5000-3p 0 1 0
chr22:41357810|41357988 hsa-miR-1288-5p 0 1 0
chr22:41357810|41357988 hsa-miR-7848-3p 0 1 0
chr22:41357810|41357988 hsa-miR-6865-3p 0 1 0
chr22:41357810|41357988 hsa-miR-6886-3p 1 0 0
chr22:41357810|41357988 hsa-miR-4433a-5p 1 1 0
chr22:41357810|41357988 hsa-miR-6798-3p 0 1 0
chr22:41357810|41357988 hsa-miR-4433b-5p 1 0 0
chr22:41357810|41357988 hsa-miR-4763-3p 1 0 0
chr22:41357810|41357988 hsa-miR-6756-5p 1 0 0
chr22:41357810|41357988 hsa-miR-6803-5p 1 0 0
chr22:41357810|41357988 hsa-miR-6851-5p 1 0 0
chr22:41357810|41357988 hsa-miR-320a-5p 1 1 0
chr22:41357810|41357988 hsa-miR-3620-5p 1 0 0
chr22:41357810|41357988 hsa-miR-328-5p 1 0 0
chr22:41357810|41357988 hsa-miR-6735-5p 0 1 0
chr22:41357810|41357988 hsa-miR-6846-5p 1 0 0
chr22:41357810|41357988 hsa-miR-6848-5p 1 0 0
chr22:41357810|41357988 hsa-miR-7843-5p 0 1 0
chr22:41357810|41357988 hsa-miR-6791-5p 1 1 0
chr22:41357810|41357988 hsa-miR-4768-5p 0 1 0
chr22:41357810|41357988 hsa-miR-6833-3p 0 1 0
chr22:41357810|41357988 hsa-miR-4724-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:41357810|41357988
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MRPQRVSGQYSVPSSNLGLHFKANGASALCCVLICPQGEGVGGGRARERRT
Nucleotide Sequence CTGAGGCCCCAGAGGGTAAGTGGCCAGTACAGTGTTCCCAGCTCCAACCTGGGGCTACATTTTAAAGCTAATGGGGCCTCTGCCCTCTGTTGTGTCCTGATTTGCCCCCAGGGGGAGGGGGTGGGAGGAGGACGGGCCAGGGAGAGAAGGACC
CircID chr22:41357810|41357988
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MARPPPTPSPWGQIRTQQRAEAPLALKCSPRLELGTLYWPLTLWGLSFPSGRLGG
Nucleotide Sequence CTGGCCCGTCCTCCTCCCACCCCCTCCCCCTGGGGGCAAATCAGGACACAACAGAGGGCAGAGGCCCCATTAGCTTTAAAATGTAGCCCCAGGTTGGAGCTGGGAACACTGTACTGGCCACTTACCCTCTGGGGCCTCAGCTTTCCCTCCGGAAGGCTGGGAGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab