CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41358570|41358735
Strand -
CircType exon
Host Gene ENSG00000100403.11;
Algorism CIRI2;
Sequence TCCAGGATGGGACACGGCCCCTCTTTCTTGGGGACCCAGTATGTCCTCTCCTCTAGACCCAGACATACAGTTATAACCGTCTGTCCTAGCCCCTCCCTAATCCCTGGCCCTCCCAGCTGTCTGGGACTTCAGTGGACCCCCAGCCCCTGCCCCCACTCACCAAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41358570|41358735 hsa-miR-567 0 0 1
chr22:41358570|41358735 hsa-miR-583 0 1 1
chr22:41358570|41358735 hsa-miR-601 1 0 1
chr22:41358570|41358735 hsa-miR-637 1 0 1
chr22:41358570|41358735 hsa-miR-877-5p 0 0 1
chr22:41358570|41358735 hsa-miR-877-3p 0 0 1
chr22:41358570|41358735 hsa-miR-297 0 0 1
chr22:41358570|41358735 hsa-miR-1231 0 0 1
chr22:41358570|41358735 hsa-miR-1321 0 0 1
chr22:41358570|41358735 hsa-miR-1197 0 0 1
chr22:41358570|41358735 hsa-miR-1324 0 0 1
chr22:41358570|41358735 hsa-miR-486-3p 1 0 1
chr22:41358570|41358735 hsa-miR-615-5p 0 1 1
chr22:41358570|41358735 hsa-miR-193a-5p 0 0 1
chr22:41358570|41358735 hsa-miR-423-5p 1 1 1
chr22:41358570|41358735 hsa-miR-1207-3p 0 0 1
chr22:41358570|41358735 hsa-miR-654-3p 0 0 1
chr22:41358570|41358735 hsa-miR-1207-5p 1 1 1
chr22:41358570|41358735 hsa-miR-518d-5p 0 1 1
chr22:41358570|41358735 hsa-miR-519b-5p 0 1 1
chr22:41358570|41358735 hsa-miR-519c-5p 0 1 1
chr22:41358570|41358735 hsa-miR-520c-5p 0 1 1
chr22:41358570|41358735 hsa-miR-526a 0 0 1
chr22:41358570|41358735 hsa-miR-198 1 0 0
chr22:41358570|41358735 hsa-miR-663a 1 0 0
chr22:41358570|41358735 hsa-miR-658 1 0 0
chr22:41358570|41358735 hsa-miR-762 1 1 0
chr22:41358570|41358735 hsa-miR-1268a 1 0 0
chr22:41358570|41358735 hsa-miR-1275 1 0 0
chr22:41358570|41358735 hsa-miR-2861 1 0 0
chr22:41358570|41358735 hsa-miR-3141 1 0 0
chr22:41358570|41358735 hsa-miR-3196 1 0 0
chr22:41358570|41358735 hsa-miR-4298 1 0 0
chr22:41358570|41358735 hsa-miR-4259 1 0 0
chr22:41358570|41358735 hsa-miR-4260 1 0 0
chr22:41358570|41358735 hsa-miR-4270 1 0 0
chr22:41358570|41358735 hsa-miR-4281 1 0 0
chr22:41358570|41358735 hsa-miR-3657 0 1 0
chr22:41358570|41358735 hsa-miR-3665 1 0 0
chr22:41358570|41358735 hsa-miR-1268b 1 0 0
chr22:41358570|41358735 hsa-miR-4466 1 0 0
chr22:41358570|41358735 hsa-miR-4481 1 0 0
chr22:41358570|41358735 hsa-miR-4488 1 0 0
chr22:41358570|41358735 hsa-miR-4489 1 1 0
chr22:41358570|41358735 hsa-miR-4492 1 0 0
chr22:41358570|41358735 hsa-miR-4498 1 0 0
chr22:41358570|41358735 hsa-miR-4505 1 0 0
chr22:41358570|41358735 hsa-miR-4507 1 0 0
chr22:41358570|41358735 hsa-miR-4518 1 0 0
chr22:41358570|41358735 hsa-miR-1587 1 0 0
chr22:41358570|41358735 hsa-miR-3960 1 0 0
chr22:41358570|41358735 hsa-miR-4651 1 0 0
chr22:41358570|41358735 hsa-miR-4656 1 0 0
chr22:41358570|41358735 hsa-miR-4688 1 0 0
chr22:41358570|41358735 hsa-miR-4706 1 0 0
chr22:41358570|41358735 hsa-miR-4710 1 0 0
chr22:41358570|41358735 hsa-miR-4721 1 0 0
chr22:41358570|41358735 hsa-miR-4739 1 1 0
chr22:41358570|41358735 hsa-miR-4741 1 0 0
chr22:41358570|41358735 hsa-miR-5090 1 0 0
chr22:41358570|41358735 hsa-miR-5192 1 0 0
chr22:41358570|41358735 hsa-miR-5194 1 0 0
chr22:41358570|41358735 hsa-miR-5787 1 1 0
chr22:41358570|41358735 hsa-miR-6085 1 1 0
chr22:41358570|41358735 hsa-miR-6132 1 0 0
chr22:41358570|41358735 hsa-miR-6133 1 0 0
chr22:41358570|41358735 hsa-miR-8077 1 0 0
chr22:41358570|41358735 hsa-miR-211-3p 1 0 0
chr22:41358570|41358735 hsa-miR-128-1-5p 0 1 0
chr22:41358570|41358735 hsa-miR-4731-5p 1 1 0
chr22:41358570|41358735 hsa-miR-125b-1-3p 1 0 0
chr22:41358570|41358735 hsa-miR-6861-5p 1 0 0
chr22:41358570|41358735 hsa-miR-7106-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6799-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6510-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6728-5p 1 0 0
chr22:41358570|41358735 hsa-miR-3192-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6757-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6727-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6759-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6721-5p 1 1 0
chr22:41358570|41358735 hsa-miR-4655-5p 1 0 0
chr22:41358570|41358735 hsa-miR-197-5p 1 0 0
chr22:41358570|41358735 hsa-miR-7845-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6742-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6716-5p 1 0 0
chr22:41358570|41358735 hsa-miR-3180-3p 1 0 0
chr22:41358570|41358735 hsa-miR-6748-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6772-5p 1 0 0
chr22:41358570|41358735 hsa-miR-185-3p 1 1 0
chr22:41358570|41358735 hsa-miR-6732-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6805-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6798-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6760-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6881-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6782-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6810-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6774-3p 0 1 0
chr22:41358570|41358735 hsa-miR-5006-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6786-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6835-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1226-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6740-5p 1 1 0
chr22:41358570|41358735 hsa-miR-204-3p 1 0 0
chr22:41358570|41358735 hsa-miR-1229-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6784-5p 1 0 0
chr22:41358570|41358735 hsa-miR-4640-5p 1 1 0
chr22:41358570|41358735 hsa-miR-1908-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1228-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6771-5p 1 0 0
chr22:41358570|41358735 hsa-miR-4446-3p 1 0 0
chr22:41358570|41358735 hsa-miR-149-3p 1 1 0
chr22:41358570|41358735 hsa-miR-6824-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6789-5p 1 0 0
chr22:41358570|41358735 hsa-miR-3162-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6802-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6781-5p 1 0 0
chr22:41358570|41358735 hsa-miR-3189-3p 1 0 0
chr22:41358570|41358735 hsa-miR-6895-5p 0 1 0
chr22:41358570|41358735 hsa-miR-664b-5p 1 0 0
chr22:41358570|41358735 hsa-miR-744-5p 1 0 0
chr22:41358570|41358735 hsa-miR-7113-5p 1 0 0
chr22:41358570|41358735 hsa-miR-2277-5p 1 0 0
chr22:41358570|41358735 hsa-miR-520g-5p 0 1 0
chr22:41358570|41358735 hsa-miR-10400-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1233-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1273h-5p 0 1 0
chr22:41358570|41358735 hsa-miR-4763-3p 1 1 0
chr22:41358570|41358735 hsa-miR-6769b-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6778-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6787-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6816-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1343-5p 1 0 0
chr22:41358570|41358735 hsa-miR-5001-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6726-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6743-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6752-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6754-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6756-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6769a-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6803-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6813-5p 1 1 0
chr22:41358570|41358735 hsa-miR-1249-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6722-3p 1 1 0
chr22:41358570|41358735 hsa-miR-6751-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6763-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6774-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6779-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6780a-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6797-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6808-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6879-5p 1 0 0
chr22:41358570|41358735 hsa-miR-7111-5p 1 0 0
chr22:41358570|41358735 hsa-miR-3620-5p 1 0 0
chr22:41358570|41358735 hsa-miR-4728-5p 1 1 0
chr22:41358570|41358735 hsa-miR-5196-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6836-5p 1 0 0
chr22:41358570|41358735 hsa-miR-10396a-5p 1 0 0
chr22:41358570|41358735 hsa-miR-10396b-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1237-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1909-3p 1 1 0
chr22:41358570|41358735 hsa-miR-328-5p 1 1 0
chr22:41358570|41358735 hsa-miR-4632-5p 1 0 0
chr22:41358570|41358735 hsa-miR-4649-5p 1 0 0
chr22:41358570|41358735 hsa-miR-4685-5p 1 1 0
chr22:41358570|41358735 hsa-miR-4726-5p 1 1 0
chr22:41358570|41358735 hsa-miR-4745-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6729-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6738-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6777-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6795-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6846-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6848-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6858-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6883-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6887-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6889-5p 1 0 0
chr22:41358570|41358735 hsa-miR-4697-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6845-5p 1 0 0
chr22:41358570|41358735 hsa-miR-939-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1238-5p 1 1 0
chr22:41358570|41358735 hsa-miR-4758-5p 1 1 0
chr22:41358570|41358735 hsa-miR-3940-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6731-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6758-5p 1 0 0
chr22:41358570|41358735 hsa-miR-1914-3p 1 0 0
chr22:41358570|41358735 hsa-miR-6736-5p 1 0 0
chr22:41358570|41358735 hsa-miR-10398-3p 1 0 0
chr22:41358570|41358735 hsa-miR-6891-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6766-5p 1 0 0
chr22:41358570|41358735 hsa-miR-6785-5p 1 1 0
chr22:41358570|41358735 hsa-miR-3184-5p 1 1 0
chr22:41358570|41358735 hsa-miR-6790-5p 1 0 0
chr22:41358570|41358735 hsa-miR-518e-5p 0 1 0
chr22:41358570|41358735 hsa-miR-518f-5p 0 1 0
chr22:41358570|41358735 hsa-miR-519a-5p 0 1 0
chr22:41358570|41358735 hsa-miR-522-5p 0 1 0
chr22:41358570|41358735 hsa-miR-523-5p 0 1 0
chr22:41358570|41358735 hsa-miR-526a-5p 0 1 0
chr22:41358570|41358735 hsa-miR-320a-3p 1 0 0
chr22:41358570|41358735 hsa-miR-320b 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:41358570|41358735
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MGHGPSFLGTQYVLSSRPRHTVITVCPSPSLIPGPPSCLGLQWTPSPCPHSPR
Nucleotide Sequence ATGGGACACGGCCCCTCTTTCTTGGGGACCCAGTATGTCCTCTCCTCTAGACCCAGACATACAGTTATAACCGTCTGTCCTAGCCCCTCCCTAATCCCTGGCCCTCCCAGCTGTCTGGGACTTCAGTGGACCCCCAGCCCCTGCCCCCACTCACCAAGG
CircID chr22:41358570|41358735
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MVSGGRGWGSTEVPDSWEGQGLGRG
Nucleotide Sequence TTGGTGAGTGGGGGCAGGGGCTGGGGGTCCACTGAAGTCCCAGACAGCTGGGAGGGCCAGGGATTAGGGAGGGGCTAG
CircID chr22:41358570|41358735
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MGGPGIREGLGQTVITVCLGLEERTYWVPKKEGPCPIL
Nucleotide Sequence CTGGGAGGGCCAGGGATTAGGGAGGGGCTAGGACAGACGGTTATAACTGTATGTCTGGGTCTAGAGGAGAGGACATACTGGGTCCCCAAGAAAGAGGGGCCGTGTCCCATCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab