CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41674237|41674461
Strand -
CircType exon
Host Gene ENSG00000100138.12;
Algorism CIRI2;
Sequence CCAGGTCAACTGCCCCATGGCTCACCCACCCAGGCTGCCTCCGGAGTCCTGCAGCACATCTCTTTGGTATGCTGCTGCCCTGCTACCCTCAAGGGCATGGTTGTGGGTAGGGGGAGAACATCAACATCACATTACCAAAAGCAAACAGCAGGGGTACATTAGTAAACGACACTTGGACATAGCCGAACAACCTCACAGAACACATGCTTCCTCCCCAAATGATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41674237|41674461 hsa-miR-15a-5p 0 0 1
chr22:41674237|41674461 hsa-miR-15a-3p 0 0 1
chr22:41674237|41674461 hsa-miR-107 0 1 1
chr22:41674237|41674461 hsa-miR-192-5p 0 0 1
chr22:41674237|41674461 hsa-miR-192-3p 0 0 1
chr22:41674237|41674461 hsa-miR-215-5p 0 0 1
chr22:41674237|41674461 hsa-miR-215-3p 0 0 1
chr22:41674237|41674461 hsa-miR-15b-5p 0 0 1
chr22:41674237|41674461 hsa-miR-15b-3p 0 0 1
chr22:41674237|41674461 hsa-miR-195-5p 0 0 1
chr22:41674237|41674461 hsa-miR-195-3p 0 0 1
chr22:41674237|41674461 hsa-miR-370-5p 0 0 1
chr22:41674237|41674461 hsa-miR-370-3p 0 0 1
chr22:41674237|41674461 hsa-miR-375-5p 0 0 1
chr22:41674237|41674461 hsa-miR-375-3p 0 0 1
chr22:41674237|41674461 hsa-miR-424-5p 0 0 1
chr22:41674237|41674461 hsa-miR-424-3p 0 0 1
chr22:41674237|41674461 hsa-miR-497-5p 0 0 1
chr22:41674237|41674461 hsa-miR-497-3p 0 0 1
chr22:41674237|41674461 hsa-miR-579-5p 0 0 1
chr22:41674237|41674461 hsa-miR-579-3p 0 0 1
chr22:41674237|41674461 hsa-miR-631 0 0 1
chr22:41674237|41674461 hsa-miR-650 0 1 1
chr22:41674237|41674461 hsa-miR-661 1 1 1
chr22:41674237|41674461 hsa-miR-938 0 0 1
chr22:41674237|41674461 hsa-miR-939-5p 0 0 1
chr22:41674237|41674461 hsa-miR-939-3p 0 0 1
chr22:41674237|41674461 hsa-miR-1203 0 0 1
chr22:41674237|41674461 hsa-miR-1205 0 0 1
chr22:41674237|41674461 hsa-miR-1286 0 1 1
chr22:41674237|41674461 hsa-miR-1293 0 0 1
chr22:41674237|41674461 hsa-miR-1294 1 1 1
chr22:41674237|41674461 hsa-miR-1262 0 0 1
chr22:41674237|41674461 hsa-miR-1827 0 0 1
chr22:41674237|41674461 hsa-miR-486-3p 0 0 1
chr22:41674237|41674461 hsa-miR-576-3p 0 0 1
chr22:41674237|41674461 hsa-miR-103 0 0 1
chr22:41674237|41674461 hsa-miR-16 0 0 1
chr22:41674237|41674461 hsa-miR-1265 1 0 0
chr22:41674237|41674461 hsa-miR-1275 1 0 0
chr22:41674237|41674461 hsa-miR-2861 1 0 0
chr22:41674237|41674461 hsa-miR-3125 1 0 0
chr22:41674237|41674461 hsa-miR-3175 1 0 0
chr22:41674237|41674461 hsa-miR-3612 0 1 0
chr22:41674237|41674461 hsa-miR-3937 1 0 0
chr22:41674237|41674461 hsa-miR-4651 1 0 0
chr22:41674237|41674461 hsa-miR-4688 1 0 0
chr22:41674237|41674461 hsa-miR-4739 1 0 0
chr22:41674237|41674461 hsa-miR-5090 1 0 0
chr22:41674237|41674461 hsa-miR-6127 1 0 0
chr22:41674237|41674461 hsa-miR-6745 1 0 0
chr22:41674237|41674461 hsa-miR-7974 1 0 0
chr22:41674237|41674461 hsa-miR-8085 1 0 0
chr22:41674237|41674461 hsa-miR-9986 1 1 0
chr22:41674237|41674461 hsa-miR-11400 1 0 0
chr22:41674237|41674461 hsa-miR-6765-5p 1 0 0
chr22:41674237|41674461 hsa-miR-671-5p 1 0 0
chr22:41674237|41674461 hsa-miR-3150a-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6861-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6825-5p 1 0 0
chr22:41674237|41674461 hsa-miR-1225-3p 1 0 0
chr22:41674237|41674461 hsa-miR-4695-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6741-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6759-5p 1 0 0
chr22:41674237|41674461 hsa-miR-3187-3p 1 0 0
chr22:41674237|41674461 hsa-miR-197-5p 1 0 0
chr22:41674237|41674461 hsa-miR-3180-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6748-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6793-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6796-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6827-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6728-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6810-5p 1 0 0
chr22:41674237|41674461 hsa-miR-1229-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4640-5p 1 0 0
chr22:41674237|41674461 hsa-miR-1228-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6771-5p 1 0 0
chr22:41674237|41674461 hsa-miR-103a-3p 0 1 0
chr22:41674237|41674461 hsa-miR-149-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6824-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6828-5p 1 0 0
chr22:41674237|41674461 hsa-miR-526b-5p 0 1 0
chr22:41674237|41674461 hsa-miR-6867-3p 0 1 0
chr22:41674237|41674461 hsa-miR-3162-3p 0 1 0
chr22:41674237|41674461 hsa-miR-4763-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6769b-5p 1 1 0
chr22:41674237|41674461 hsa-miR-6870-5p 1 0 0
chr22:41674237|41674461 hsa-miR-1343-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6737-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6743-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6756-5p 1 1 0
chr22:41674237|41674461 hsa-miR-6819-5p 1 0 0
chr22:41674237|41674461 hsa-miR-1249-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6722-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6751-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6763-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6780a-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6797-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6808-5p 1 0 0
chr22:41674237|41674461 hsa-miR-7111-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6836-5p 1 1 0
chr22:41674237|41674461 hsa-miR-328-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4632-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4685-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4701-3p 1 1 0
chr22:41674237|41674461 hsa-miR-6735-5p 0 1 0
chr22:41674237|41674461 hsa-miR-6795-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6848-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6883-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4723-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4758-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6511a-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6511b-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6731-5p 1 0 0
chr22:41674237|41674461 hsa-miR-4747-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6766-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6785-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6762-5p 1 0 0
chr22:41674237|41674461 hsa-miR-6893-3p 1 0 0
chr22:41674237|41674461 hsa-miR-6810-3p 1 1 0
chr22:41674237|41674461 hsa-miR-10394-5p 0 1 0
chr22:41674237|41674461 hsa-miR-6876-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:41674237|41674461
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MPHGSPTQAASGVLQHISLVCCCPATLKGMVVGRGRTSTSHYQKQTAGVH
Nucleotide Sequence CTGCCCCATGGCTCACCCACCCAGGCTGCCTCCGGAGTCCTGCAGCACATCTCTTTGGTATGCTGCTGCCCTGCTACCCTCAAGGGCATGGTTGTGGGTAGGGGGAGAACATCAACATCACATTACCAAAAGCAAACAGCAGGGGTACATTAG
CircID chr22:41674237|41674461
ORF Type ORF2
Protein Length 69
Nucleotide Length 207
Protein Sequence MAHPPRLPPESCSTSLWYAAALLPSRAWLWVGGEHQHHITKSKQQGYISKRHLDIAEQPHRTHASSPND
Nucleotide Sequence ATGGCTCACCCACCCAGGCTGCCTCCGGAGTCCTGCAGCACATCTCTTTGGTATGCTGCTGCCCTGCTACCCTCAAGGGCATGGTTGTGGGTAGGGGGAGAACATCAACATCACATTACCAAAAGCAAACAGCAGGGGTACATTAGTAAACGACACTTGGACATAGCCGAACAACCTCACAGAACACATGCTTCCTCCCCAAATGAT
CircID chr22:41674237|41674461
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MPLRVAGQQHTKEMCCRTPEAAWVGEPWGS
Nucleotide Sequence ATGCCCTTGAGGGTAGCAGGGCAGCAGCATACCAAAGAGATGTGCTGCAGGACTCCGGAGGCAGCCTGGGTGGGTGAGCCATGGGGCAGTTGA
CircID chr22:41674237|41674461
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MCSVRLFGYVQVSFTNVPLLFAFGNVMLMFSPYPQPCP
Nucleotide Sequence ATGTGTTCTGTGAGGTTGTTCGGCTATGTCCAAGTGTCGTTTACTAATGTACCCCTGCTGTTTGCTTTTGGTAATGTGATGTTGATGTTCTCCCCCTACCCACAACCATGCCCTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab