CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41694553|41694643
Strand +
CircType exon
Host Gene ENSG00000184208.10;
Algorism CIRI2;
Sequence CTTTCATCTGATCTTGTTTCTCCCACTGTGGTGTCTGGGTCTCCTCACCATTCTCATCTCCAGTCTGGCCTTGCTTCCCCAATCCTTGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41694553|41694643 hsa-miR-143-5p 0 0 1
chr22:41694553|41694643 hsa-miR-143-3p 0 0 1
chr22:41694553|41694643 hsa-miR-383-5p 0 0 1
chr22:41694553|41694643 hsa-miR-383-3p 0 0 1
chr22:41694553|41694643 hsa-miR-580-5p 0 0 1
chr22:41694553|41694643 hsa-miR-580-3p 0 0 1
chr22:41694553|41694643 hsa-miR-620 0 0 1
chr22:41694553|41694643 hsa-miR-1270 0 0 1
chr22:41694553|41694643 hsa-miR-140-3p 0 1 1
chr22:41694553|41694643 hsa-miR-128 0 0 1
chr22:41694553|41694643 hsa-miR-762 1 0 0
chr22:41694553|41694643 hsa-miR-1275 1 0 0
chr22:41694553|41694643 hsa-miR-2110 1 1 0
chr22:41694553|41694643 hsa-miR-3131 1 0 0
chr22:41694553|41694643 hsa-miR-3196 1 0 0
chr22:41694553|41694643 hsa-miR-4270 1 0 0
chr22:41694553|41694643 hsa-miR-4271 1 1 0
chr22:41694553|41694643 hsa-miR-3652 1 0 0
chr22:41694553|41694643 hsa-miR-3918 1 0 0
chr22:41694553|41694643 hsa-miR-4430 1 0 0
chr22:41694553|41694643 hsa-miR-3135b 1 0 0
chr22:41694553|41694643 hsa-miR-4463 1 1 0
chr22:41694553|41694643 hsa-miR-4479 1 0 0
chr22:41694553|41694643 hsa-miR-4494 0 1 0
chr22:41694553|41694643 hsa-miR-2392 1 0 0
chr22:41694553|41694643 hsa-miR-4507 1 0 0
chr22:41694553|41694643 hsa-miR-4515 1 0 0
chr22:41694553|41694643 hsa-miR-4651 1 0 0
chr22:41694553|41694643 hsa-miR-4673 1 0 0
chr22:41694553|41694643 hsa-miR-4683 1 0 0
chr22:41694553|41694643 hsa-miR-4689 1 1 0
chr22:41694553|41694643 hsa-miR-4739 1 0 0
chr22:41694553|41694643 hsa-miR-4748 1 0 0
chr22:41694553|41694643 hsa-miR-4784 0 1 0
chr22:41694553|41694643 hsa-miR-5572 1 0 0
chr22:41694553|41694643 hsa-miR-5698 1 0 0
chr22:41694553|41694643 hsa-miR-6075 1 0 0
chr22:41694553|41694643 hsa-miR-6088 0 1 0
chr22:41694553|41694643 hsa-miR-6745 1 0 0
chr22:41694553|41694643 hsa-miR-8086 1 0 0
chr22:41694553|41694643 hsa-miR-8089 1 0 0
chr22:41694553|41694643 hsa-miR-12128 1 0 0
chr22:41694553|41694643 hsa-miR-4433b-3p 1 0 0
chr22:41694553|41694643 hsa-miR-671-5p 1 0 0
chr22:41694553|41694643 hsa-miR-3150a-3p 1 0 0
chr22:41694553|41694643 hsa-miR-7106-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6825-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6894-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6857-5p 1 0 0
chr22:41694553|41694643 hsa-miR-139-3p 1 0 0
chr22:41694553|41694643 hsa-miR-6833-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6757-5p 1 0 0
chr22:41694553|41694643 hsa-miR-4695-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6746-5p 1 0 0
chr22:41694553|41694643 hsa-miR-4753-5p 0 1 0
chr22:41694553|41694643 hsa-miR-6716-5p 1 0 0
chr22:41694553|41694643 hsa-miR-3151-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6798-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6760-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6782-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6810-5p 1 0 0
chr22:41694553|41694643 hsa-miR-7855-5p 0 1 0
chr22:41694553|41694643 hsa-miR-5008-5p 1 0 0
chr22:41694553|41694643 hsa-miR-7109-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1226-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6740-5p 1 0 0
chr22:41694553|41694643 hsa-miR-4640-5p 1 0 0
chr22:41694553|41694643 hsa-miR-296-3p 1 0 0
chr22:41694553|41694643 hsa-miR-6771-5p 1 0 0
chr22:41694553|41694643 hsa-miR-7854-3p 1 0 0
chr22:41694553|41694643 hsa-miR-4743-5p 1 1 0
chr22:41694553|41694643 hsa-miR-6830-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6824-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6828-5p 0 1 0
chr22:41694553|41694643 hsa-miR-6878-5p 1 1 0
chr22:41694553|41694643 hsa-miR-3922-5p 1 1 0
chr22:41694553|41694643 hsa-miR-483-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1233-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1273h-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6778-5p 1 1 0
chr22:41694553|41694643 hsa-miR-6870-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1343-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6737-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6756-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6803-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6819-5p 1 0 0
chr22:41694553|41694643 hsa-miR-7107-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6751-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6763-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6779-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6780a-5p 1 1 0
chr22:41694553|41694643 hsa-miR-6788-5p 1 1 0
chr22:41694553|41694643 hsa-miR-6797-5p 1 0 0
chr22:41694553|41694643 hsa-miR-7111-5p 1 1 0
chr22:41694553|41694643 hsa-miR-6780b-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6836-5p 1 0 0
chr22:41694553|41694643 hsa-miR-4725-3p 1 0 0
chr22:41694553|41694643 hsa-miR-4726-5p 1 0 0
chr22:41694553|41694643 hsa-miR-4745-5p 1 0 0
chr22:41694553|41694643 hsa-miR-675-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6858-5p 0 1 0
chr22:41694553|41694643 hsa-miR-4723-5p 1 1 0
chr22:41694553|41694643 hsa-miR-939-5p 1 0 0
chr22:41694553|41694643 hsa-miR-4769-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1266-5p 1 0 0
chr22:41694553|41694643 hsa-miR-3940-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6731-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1914-3p 1 0 0
chr22:41694553|41694643 hsa-miR-4700-5p 1 1 0
chr22:41694553|41694643 hsa-miR-6766-5p 1 0 0
chr22:41694553|41694643 hsa-miR-6837-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1295b-5p 0 1 0
chr22:41694553|41694643 hsa-miR-6733-5p 1 0 0
chr22:41694553|41694643 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:41694553|41694643
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MILFLPLWCLGLLTILISSLALLPQSLS
Nucleotide Sequence CTGATCTTGTTTCTCCCACTGTGGTGTCTGGGTCTCCTCACCATTCTCATCTCCAGTCTGGCCTTGCTTCCCCAATCCTTGAGC
CircID chr22:41694553|41694643
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MGKQGQTGDENGEETQTPQWEKQDQMK
Nucleotide Sequence TTGGGGAAGCAAGGCCAGACTGGAGATGAGAATGGTGAGGAGACCCAGACACCACAGTGGGAGAAACAAGATCAGATGAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab