CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41867083|41867280
Strand +
CircType exon
Host Gene ENSG00000198911.10;
Algorism CIRI2;
Sequence CTTGAAAGCTAGTAGCTGCATTCTGGTATATCAAAGGCTGCTGGATGATCCTCGTCTGCGGAGTGGTGCTGAATGTTGGCGTGATCATTACCGTCTGTTGTTGCAGCTGAGTTTGAGGTTGAGGCTGGGGCTGGGGGCGGGGCTGAAGAATAGGAGTTGCCCTGGGTGTGGTGGGAACTGAGGTGGGAGAAACCTTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41867083|41867280 hsa-miR-29a-5p 0 0 1
chr22:41867083|41867280 hsa-miR-29a-3p 0 0 1
chr22:41867083|41867280 hsa-miR-181c-5p 0 0 1
chr22:41867083|41867280 hsa-miR-181c-3p 0 0 1
chr22:41867083|41867280 hsa-miR-150-5p 0 0 1
chr22:41867083|41867280 hsa-miR-150-3p 0 0 1
chr22:41867083|41867280 hsa-miR-29c-5p 0 0 1
chr22:41867083|41867280 hsa-miR-29c-3p 0 0 1
chr22:41867083|41867280 hsa-miR-181d-5p 0 0 1
chr22:41867083|41867280 hsa-miR-181d-3p 0 0 1
chr22:41867083|41867280 hsa-miR-498-5p 0 0 1
chr22:41867083|41867280 hsa-miR-498-3p 0 0 1
chr22:41867083|41867280 hsa-miR-1301-5p 0 0 1
chr22:41867083|41867280 hsa-miR-1301-3p 0 0 1
chr22:41867083|41867280 hsa-miR-543 0 1 1
chr22:41867083|41867280 hsa-miR-512-5p 0 0 1
chr22:41867083|41867280 hsa-miR-532-3p 1 1 1
chr22:41867083|41867280 hsa-miR-361-3p 0 0 1
chr22:41867083|41867280 hsa-miR-1224-3p 1 1 1
chr22:41867083|41867280 hsa-miR-1207-3p 0 0 1
chr22:41867083|41867280 hsa-miR-188-3p 0 0 1
chr22:41867083|41867280 hsa-miR-338-3p 0 0 1
chr22:41867083|41867280 hsa-miR-371-5p 0 0 1
chr22:41867083|41867280 hsa-miR-1260 0 0 1
chr22:41867083|41867280 hsa-miR-1280 0 0 1
chr22:41867083|41867280 hsa-miR-181a 0 0 1
chr22:41867083|41867280 hsa-miR-181b 0 0 1
chr22:41867083|41867280 hsa-miR-29b 0 0 1
chr22:41867083|41867280 hsa-miR-1260a 1 1 0
chr22:41867083|41867280 hsa-miR-1470 1 0 0
chr22:41867083|41867280 hsa-miR-1913 1 0 0
chr22:41867083|41867280 hsa-miR-1260b 1 1 0
chr22:41867083|41867280 hsa-miR-4323 1 1 0
chr22:41867083|41867280 hsa-miR-4262 0 1 0
chr22:41867083|41867280 hsa-miR-3943 1 0 0
chr22:41867083|41867280 hsa-miR-5047 0 1 0
chr22:41867083|41867280 hsa-miR-197-3p 1 0 0
chr22:41867083|41867280 hsa-miR-500b-3p 0 1 0
chr22:41867083|41867280 hsa-miR-4665-3p 1 0 0
chr22:41867083|41867280 hsa-miR-4726-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6720-5p 1 0 0
chr22:41867083|41867280 hsa-miR-766-3p 1 1 0
chr22:41867083|41867280 hsa-miR-210-5p 1 0 0
chr22:41867083|41867280 hsa-miR-593-5p 1 0 0
chr22:41867083|41867280 hsa-miR-6875-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6849-3p 0 1 0
chr22:41867083|41867280 hsa-miR-6787-3p 0 1 0
chr22:41867083|41867280 hsa-miR-4713-5p 1 1 0
chr22:41867083|41867280 hsa-miR-6815-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6884-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6763-3p 1 0 0
chr22:41867083|41867280 hsa-miR-7108-3p 0 1 0
chr22:41867083|41867280 hsa-miR-4707-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6803-3p 1 0 0
chr22:41867083|41867280 hsa-miR-4715-3p 1 0 0
chr22:41867083|41867280 hsa-miR-7113-3p 1 0 0
chr22:41867083|41867280 hsa-miR-181b-5p 0 1 0
chr22:41867083|41867280 hsa-miR-4687-5p 1 0 0
chr22:41867083|41867280 hsa-miR-584-3p 1 1 0
chr22:41867083|41867280 hsa-miR-6867-3p 1 0 0
chr22:41867083|41867280 hsa-miR-629-3p 0 1 0
chr22:41867083|41867280 hsa-miR-7112-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6752-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6777-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6767-5p 0 1 0
chr22:41867083|41867280 hsa-miR-541-5p 1 0 0
chr22:41867083|41867280 hsa-miR-4433a-5p 1 0 0
chr22:41867083|41867280 hsa-miR-1229-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6779-3p 1 0 0
chr22:41867083|41867280 hsa-miR-4433b-5p 1 0 0
chr22:41867083|41867280 hsa-miR-676-5p 1 1 0
chr22:41867083|41867280 hsa-miR-181a-5p 0 1 0
chr22:41867083|41867280 hsa-miR-1228-3p 1 0 0
chr22:41867083|41867280 hsa-miR-5586-5p 0 1 0
chr22:41867083|41867280 hsa-miR-1915-3p 1 1 0
chr22:41867083|41867280 hsa-miR-10396a-3p 1 0 0
chr22:41867083|41867280 hsa-miR-10396b-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6877-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6511a-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6784-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6792-3p 1 0 0
chr22:41867083|41867280 hsa-miR-6862-3p 1 0 0
chr22:41867083|41867280 hsa-miR-10401-3p 1 0 0
chr22:41867083|41867280 hsa-miR-10392-3p 1 1 0
chr22:41867083|41867280 hsa-miR-3130-5p 1 0 0
chr22:41867083|41867280 hsa-miR-6511b-3p 1 0 0
chr22:41867083|41867280 hsa-miR-4690-3p 1 0 0
chr22:41867083|41867280 hsa-miR-26a-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:41867083|41867280
ORF Type ORF1
Protein Length 59
Nucleotide Length 180
Protein Sequence LKASSCILVYQRLLDDPRLRSGAECWRDHYRLLLQLSLRLRLGLGAGLKNRSCPGCGGN
Nucleotide Sequence TTGAAAGCTAGTAGCTGCATTCTGGTATATCAAAGGCTGCTGGATGATCCTCGTCTGCGGAGTGGTGCTGAATGTTGGCGTGATCATTACCGTCTGTTGTTGCAGCTGAGTTTGAGGTTGAGGCTGGGGCTGGGGGCGGGGCTGAAGAATAGGAGTTGCCCTGGGTGTGGTGGGAACTGA

CircID chr22:41867083|41867280
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MQQQTVMITPTFSTTPQTRIIQQPLIYQNAATSFQ
Nucleotide Sequence CTGCAACAACAGACGGTAATGATCACGCCAACATTCAGCACCACTCCGCAGACGAGGATCATCCAGCAGCCTTTGATATACCAGAATGCAGCTACTAGCTTTCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites