CircRNA Information

General Information
circRNA Basic Information
CircID chr22:41906912|41907228
Strand -
CircType exon
Host Gene ENSG00000198911.10;
Algorism CIRI2;
Sequence TGTTTCTCCCATGGCCTCCTGAGTGATGGGCCCTGCCTCCCTGTGCCTCATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAGACTGGGGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCTCCTGCCCCTCCCCTACTCTCACTGTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTCTCACTATTGTTTGGGTGTGGGAGGGGGTGGTTTTTCACTGAAAAGGGGGGTACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:41906912|41907228 hsa-miR-185-5p 0 0 1
chr22:41906912|41907228 hsa-miR-185-3p 0 0 1
chr22:41906912|41907228 hsa-miR-370-5p 0 0 1
chr22:41906912|41907228 hsa-miR-370-3p 0 0 1
chr22:41906912|41907228 hsa-miR-328-5p 0 0 1
chr22:41906912|41907228 hsa-miR-328-3p 0 0 1
chr22:41906912|41907228 hsa-miR-506-5p 0 0 1
chr22:41906912|41907228 hsa-miR-506-3p 0 0 1
chr22:41906912|41907228 hsa-miR-510-5p 0 0 1
chr22:41906912|41907228 hsa-miR-510-3p 0 0 1
chr22:41906912|41907228 hsa-miR-539-5p 0 0 1
chr22:41906912|41907228 hsa-miR-539-3p 0 0 1
chr22:41906912|41907228 hsa-miR-596 0 0 1
chr22:41906912|41907228 hsa-miR-603 0 0 1
chr22:41906912|41907228 hsa-miR-622 0 1 1
chr22:41906912|41907228 hsa-miR-650 1 1 1
chr22:41906912|41907228 hsa-miR-543 0 0 1
chr22:41906912|41907228 hsa-miR-921 0 1 1
chr22:41906912|41907228 hsa-miR-940 0 1 1
chr22:41906912|41907228 hsa-miR-663b 0 1 1
chr22:41906912|41907228 hsa-miR-1291 0 1 1
chr22:41906912|41907228 hsa-miR-1255a 0 1 1
chr22:41906912|41907228 hsa-miR-1321 0 0 1
chr22:41906912|41907228 hsa-miR-1827 0 0 1
chr22:41906912|41907228 hsa-miR-486-3p 1 0 1
chr22:41906912|41907228 hsa-miR-532-3p 0 1 1
chr22:41906912|41907228 hsa-miR-615-5p 0 0 1
chr22:41906912|41907228 hsa-miR-423-5p 1 1 1
chr22:41906912|41907228 hsa-miR-361-3p 0 1 1
chr22:41906912|41907228 hsa-miR-767-3p 0 0 1
chr22:41906912|41907228 hsa-miR-188-3p 0 1 1
chr22:41906912|41907228 hsa-miR-582-5p 0 0 1
chr22:41906912|41907228 hsa-miR-1207-5p 1 0 1
chr22:41906912|41907228 hsa-miR-362-3p 0 0 1
chr22:41906912|41907228 hsa-miR-548d-3p 0 1 1
chr22:41906912|41907228 hsa-miR-1255b 0 0 1
chr22:41906912|41907228 hsa-miR-220c 0 0 1
chr22:41906912|41907228 hsa-miR-124 0 0 1
chr22:41906912|41907228 hsa-miR-329 0 0 1
chr22:41906912|41907228 hsa-miR-1185 0 0 1
chr22:41906912|41907228 hsa-miR-638 1 0 0
chr22:41906912|41907228 hsa-miR-663a 1 0 0
chr22:41906912|41907228 hsa-miR-658 1 0 0
chr22:41906912|41907228 hsa-miR-762 1 0 0
chr22:41906912|41907228 hsa-miR-665 1 0 0
chr22:41906912|41907228 hsa-miR-1182 1 0 0
chr22:41906912|41907228 hsa-miR-1286 1 0 0
chr22:41906912|41907228 hsa-miR-1268a 1 0 0
chr22:41906912|41907228 hsa-miR-1275 1 0 0
chr22:41906912|41907228 hsa-miR-1976 0 1 0
chr22:41906912|41907228 hsa-miR-3132 1 0 0
chr22:41906912|41907228 hsa-miR-466 0 1 0
chr22:41906912|41907228 hsa-miR-544b 0 1 0
chr22:41906912|41907228 hsa-miR-3138 1 0 0
chr22:41906912|41907228 hsa-miR-3141 1 0 0
chr22:41906912|41907228 hsa-miR-3153 1 0 0
chr22:41906912|41907228 hsa-miR-3154 1 0 0
chr22:41906912|41907228 hsa-miR-3175 1 0 0
chr22:41906912|41907228 hsa-miR-3196 1 0 0
chr22:41906912|41907228 hsa-miR-3197 1 0 0
chr22:41906912|41907228 hsa-miR-4306 1 1 0
chr22:41906912|41907228 hsa-miR-4270 0 1 0
chr22:41906912|41907228 hsa-miR-3621 1 0 0
chr22:41906912|41907228 hsa-miR-3916 1 1 0
chr22:41906912|41907228 hsa-miR-3941 0 1 0
chr22:41906912|41907228 hsa-miR-1268b 1 0 0
chr22:41906912|41907228 hsa-miR-4458 1 0 0
chr22:41906912|41907228 hsa-miR-4462 1 0 0
chr22:41906912|41907228 hsa-miR-4463 1 0 0
chr22:41906912|41907228 hsa-miR-4466 1 0 0
chr22:41906912|41907228 hsa-miR-4488 1 0 0
chr22:41906912|41907228 hsa-miR-4498 1 0 0
chr22:41906912|41907228 hsa-miR-4516 1 0 0
chr22:41906912|41907228 hsa-miR-4518 0 1 0
chr22:41906912|41907228 hsa-miR-3978 1 0 0
chr22:41906912|41907228 hsa-miR-4644 0 1 0
chr22:41906912|41907228 hsa-miR-4651 1 0 0
chr22:41906912|41907228 hsa-miR-4688 1 1 0
chr22:41906912|41907228 hsa-miR-4710 1 0 0
chr22:41906912|41907228 hsa-miR-4739 0 1 0
chr22:41906912|41907228 hsa-miR-5090 1 0 0
chr22:41906912|41907228 hsa-miR-5192 1 0 0
chr22:41906912|41907228 hsa-miR-5194 1 0 0
chr22:41906912|41907228 hsa-miR-5698 1 0 0
chr22:41906912|41907228 hsa-miR-5739 1 0 0
chr22:41906912|41907228 hsa-miR-6085 1 0 0
chr22:41906912|41907228 hsa-miR-6088 1 0 0
chr22:41906912|41907228 hsa-miR-6127 1 0 0
chr22:41906912|41907228 hsa-miR-6133 1 0 0
chr22:41906912|41907228 hsa-miR-6165 1 0 0
chr22:41906912|41907228 hsa-miR-6860 1 0 0
chr22:41906912|41907228 hsa-miR-8072 1 0 0
chr22:41906912|41907228 hsa-miR-8485 0 1 0
chr22:41906912|41907228 hsa-miR-6734-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4700-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6747-3p 0 1 0
chr22:41906912|41907228 hsa-miR-4433a-3p 1 0 0
chr22:41906912|41907228 hsa-miR-6765-5p 1 0 0
chr22:41906912|41907228 hsa-miR-7106-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6825-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6892-3p 1 1 0
chr22:41906912|41907228 hsa-miR-6799-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6510-5p 1 0 0
chr22:41906912|41907228 hsa-miR-3622a-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4768-3p 0 1 0
chr22:41906912|41907228 hsa-miR-3663-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6880-5p 1 0 0
chr22:41906912|41907228 hsa-miR-7847-3p 1 0 0
chr22:41906912|41907228 hsa-miR-4695-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6746-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4722-5p 1 0 0
chr22:41906912|41907228 hsa-miR-3622b-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6721-5p 1 1 0
chr22:41906912|41907228 hsa-miR-197-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6849-3p 0 1 0
chr22:41906912|41907228 hsa-miR-7845-5p 1 0 0
chr22:41906912|41907228 hsa-miR-3605-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6871-5p 1 0 0
chr22:41906912|41907228 hsa-miR-3151-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6768-5p 0 1 0
chr22:41906912|41907228 hsa-miR-3180-3p 1 0 0
chr22:41906912|41907228 hsa-miR-6772-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6732-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6805-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6770-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6760-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6881-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6782-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6728-3p 0 1 0
chr22:41906912|41907228 hsa-miR-3934-3p 1 0 0
chr22:41906912|41907228 hsa-miR-1226-5p 1 0 0
chr22:41906912|41907228 hsa-miR-1229-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4640-5p 1 0 0
chr22:41906912|41907228 hsa-miR-1228-5p 1 0 0
chr22:41906912|41907228 hsa-miR-296-3p 1 0 0
chr22:41906912|41907228 hsa-miR-6771-5p 1 1 0
chr22:41906912|41907228 hsa-miR-4690-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6823-5p 1 0 0
chr22:41906912|41907228 hsa-miR-92b-5p 1 0 0
chr22:41906912|41907228 hsa-miR-877-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4713-3p 1 0 0
chr22:41906912|41907228 hsa-miR-149-3p 1 1 0
chr22:41906912|41907228 hsa-miR-3616-3p 1 0 0
chr22:41906912|41907228 hsa-miR-6824-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6789-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6802-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6776-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6781-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6878-5p 0 1 0
chr22:41906912|41907228 hsa-miR-516b-5p 1 0 0
chr22:41906912|41907228 hsa-miR-5010-5p 1 0 0
chr22:41906912|41907228 hsa-miR-7112-5p 1 1 0
chr22:41906912|41907228 hsa-miR-1237-3p 0 1 0
chr22:41906912|41907228 hsa-miR-4750-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4761-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6865-3p 0 1 0
chr22:41906912|41907228 hsa-miR-7113-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6738-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6802-3p 0 1 0
chr22:41906912|41907228 hsa-miR-3664-3p 0 1 0
chr22:41906912|41907228 hsa-miR-3173-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6798-3p 0 1 0
chr22:41906912|41907228 hsa-miR-1911-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6734-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6729-3p 1 0 0
chr22:41906912|41907228 hsa-miR-5003-5p 0 1 0
chr22:41906912|41907228 hsa-miR-124-3p 0 1 0
chr22:41906912|41907228 hsa-miR-1233-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4763-3p 1 1 0
chr22:41906912|41907228 hsa-miR-6778-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6787-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6816-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6870-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6775-5p 0 1 0
chr22:41906912|41907228 hsa-miR-1343-5p 1 0 0
chr22:41906912|41907228 hsa-miR-3180 1 0 0
chr22:41906912|41907228 hsa-miR-5001-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6743-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6754-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6756-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6803-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6813-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6815-5p 0 1 0
chr22:41906912|41907228 hsa-miR-7107-5p 1 1 0
chr22:41906912|41907228 hsa-miR-10401-5p 1 0 0
chr22:41906912|41907228 hsa-miR-11181-3p 1 0 0
chr22:41906912|41907228 hsa-miR-1249-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6722-3p 1 0 0
chr22:41906912|41907228 hsa-miR-6751-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6779-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6780a-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6797-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6879-5p 1 0 0
chr22:41906912|41907228 hsa-miR-7111-5p 1 0 0
chr22:41906912|41907228 hsa-miR-1915-3p 1 0 0
chr22:41906912|41907228 hsa-miR-3620-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4728-5p 1 1 0
chr22:41906912|41907228 hsa-miR-5196-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6780b-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6836-5p 1 1 0
chr22:41906912|41907228 hsa-miR-10396b-5p 1 0 0
chr22:41906912|41907228 hsa-miR-1237-5p 1 0 0
chr22:41906912|41907228 hsa-miR-1909-3p 1 0 0
chr22:41906912|41907228 hsa-miR-4649-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4725-3p 1 0 0
chr22:41906912|41907228 hsa-miR-4745-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6729-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6738-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6795-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6846-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6848-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6858-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6883-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6887-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4436b-3p 1 0 0
chr22:41906912|41907228 hsa-miR-4723-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6885-5p 1 1 0
chr22:41906912|41907228 hsa-miR-939-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4758-5p 1 0 0
chr22:41906912|41907228 hsa-miR-10394-3p 1 0 0
chr22:41906912|41907228 hsa-miR-6799-3p 1 1 0
chr22:41906912|41907228 hsa-miR-1914-3p 1 0 0
chr22:41906912|41907228 hsa-miR-4665-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4700-5p 0 1 0
chr22:41906912|41907228 hsa-miR-6785-5p 1 0 0
chr22:41906912|41907228 hsa-miR-4667-5p 1 0 0
chr22:41906912|41907228 hsa-miR-3184-5p 1 1 0
chr22:41906912|41907228 hsa-miR-6893-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6775-3p 0 1 0
chr22:41906912|41907228 hsa-miR-6512-3p 0 1 0
chr22:41906912|41907228 hsa-miR-4756-5p 0 1 0
chr22:41906912|41907228 hsa-miR-3619-5p 1 0 0
chr22:41906912|41907228 hsa-miR-6737-3p 0 1 0
chr22:41906912|41907228 hsa-miR-548aa 0 1 0
chr22:41906912|41907228 hsa-miR-548t-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:41906912|41907228
ORF Type ORF1
Protein Length 94
Nucleotide Length 285
Protein Sequence MSDGPCLPVPHPQAGWSRGWAGAPAQTGGCSQQGHLDAGWNVIPGVCLDPTCFLSLLPLPYSHCNLWTLPACVLCVCPVPFLTIVWVWEGVVFH
Nucleotide Sequence CTGAGTGATGGGCCCTGCCTCCCTGTGCCTCATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAGACTGGGGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCTCCTGCCCCTCCCCTACTCTCACTGTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTCTCACTATTGTTTGGGTGTGGGAGGGGGTGGTTTTTCACTGA
CircID chr22:41906912|41907228
ORF Type ORF2
Protein Length 97
Nucleotide Length 291
Protein Sequence MGPASLCLILRLVGAEGGQEPQHRLGGAHSRATLMQAGMLSLGCAWTPPAFFLSCPSPTLTVIYGPCPPACCVYVLCLFSLLFGCGRGWFFTEKGGT
Nucleotide Sequence ATGGGCCCTGCCTCCCTGTGCCTCATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAGACTGGGGGGTGCTCACAGCAGGGCCACCTTGATGCAGGCTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCTCCTGCCCCTCCCCTACTCTCACTGTAATTTATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTCTCACTATTGTTTGGGTGTGGGAGGGGGTGGTTTTTCACTGAAAAGGGGGGTACA
CircID chr22:41906912|41907228
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MPPCASSSGWLEQRVGRSPSTDWGVLTAGPP
Nucleotide Sequence CTGCCTCCCTGTGCCTCATCCTCAGGCTGGTTGGAGCAGAGGGTGGGCAGGAGCCCCAGCACAGACTGGGGGGTGCTCACAGCAGGGCCACCTTGA
CircID chr22:41906912|41907228
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MECYPWGVLGPHLLSFSPAPPLLSL
Nucleotide Sequence CTGGAATGTTATCCCTGGGGTGTGCTTGGACCCCACCTGCTTTCTTTCTCTCCTGCCCCTCCCCTACTCTCACTGTAA
CircID chr22:41906912|41907228
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MDPARLRVVCMSCAFSHYCLGVGGGGFSLKRGVH
Nucleotide Sequence ATGGACCCTGCCCGCCTGCGTGTTGTGTGTATGTCCTGTGCCTTTTCTCACTATTGTTTGGGTGTGGGAGGGGGTGGTTTTTCACTGAAAAGGGGGGTACAC
CircID chr22:41906912|41907228
ORF Type ORF6
Protein Length 44
Nucleotide Length 132
Protein Sequence MHQGGPAVSTPQSVLGLLPTLCSNQPEDEAQGGRAHHSGGHGRN
Nucleotide Sequence CTGCATCAAGGTGGCCCTGCTGTGAGCACCCCCCAGTCTGTGCTGGGGCTCCTGCCCACCCTCTGCTCCAACCAGCCTGAGGATGAGGCACAGGGAGGCAGGGCCCATCACTCAGGAGGCCATGGGAGAAAC
CircID chr22:41906912|41907228
ORF Type ORF7
Protein Length 32
Nucleotide Length 96
Protein Sequence MCWGSCPPSAPTSLRMRHREAGPITQEAMGET
Nucleotide Sequence CTGTGCTGGGGCTCCTGCCCACCCTCTGCTCCAACCAGCCTGAGGATGAGGCACAGGGAGGCAGGGCCCATCACTCAGGAGGCCATGGGAGAAACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab