CircNet

General Information

circRNA Basic Information

CircID	chr22:42060197\|42060352
Strand	-
CircType	exon
Host Gene	ENSG00000198951.10;
Algorism	CIRI2;
Sequence	CTCCCCACTTGCCCTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCCTCACTGCTGGGACATCTCCAGGTTCTTGATGGGATACAGGTACCACATCACTACCCCTGAAGGGTTGATGATCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr22:42060197\|42060352	hsa-miR-591	-5	1	1
chr22:42060197\|42060352	hsa-miR-619-5p	0	0	1
chr22:42060197\|42060352	hsa-miR-619-3p	0	0	1
chr22:42060197\|42060352	hsa-miR-620	7	0	1
chr22:42060197\|42060352	hsa-miR-708-5p	0	0	1
chr22:42060197\|42060352	hsa-miR-708-3p	0	0	1
chr22:42060197\|42060352	hsa-miR-939-5p	0	0	1
chr22:42060197\|42060352	hsa-miR-939-3p	0	0	1
chr22:42060197\|42060352	hsa-miR-1263	-9	0	1
chr22:42060197\|42060352	hsa-miR-1270	0	0	1
chr22:42060197\|42060352	hsa-miR-491-5p	2	0	1
chr22:42060197\|42060352	hsa-miR-490-3p	-5	1	1
chr22:42060197\|42060352	hsa-miR-28-5p	0	0	1
chr22:42060197\|42060352	hsa-miR-1302	5	0	1
chr22:42060197\|42060352	hsa-miR-542-3p	-4	0	1
chr22:42060197\|42060352	hsa-miR-548b-3p	7	0	1
chr22:42060197\|42060352	hsa-miR-1245	0	0	1
chr22:42060197\|42060352	hsa-miR-4298	-10	1	0
chr22:42060197\|42060352	hsa-miR-4304	3	1	0
chr22:42060197\|42060352	hsa-miR-4253	0	1	0
chr22:42060197\|42060352	hsa-miR-4254	-1	1	0
chr22:42060197\|42060352	hsa-miR-7974	-14	1	0
chr22:42060197\|42060352	hsa-miR-593-5p	-20	1	0
chr22:42060197\|42060352	hsa-miR-181a-2-3p	-4	1	0
chr22:42060197\|42060352	hsa-miR-1915-3p	0	1	0
chr22:42060197\|42060352	hsa-miR-4685-5p	0	1	0
chr22:42060197\|42060352	hsa-miR-6858-5p	-7	1	0
chr22:42060197\|42060352	hsa-miR-1199-5p	-10	1	0
chr22:42060197\|42060352	hsa-miR-6837-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr22:42060197\|42060352
ORF Type	ORF1
Protein Length	42
Nucleotide Length	129
Protein Sequence	MGMPRLHGLGSVVPPQPVTCPSSSLLGHLQVLDGIQVPHHYP
Nucleotide Sequence	CTGGGCATGCCAAGGCTCCATGGTCTAGGCTCAGTGGTGCCACCACAGCCTGTCACATGTCCCAGCTCCTCACTGCTGGGACATCTCCAGGTTCTTGATGGGATACAGGTACCACATCACTACCCCTGA

CircID	chr22:42060197\|42060352
ORF Type	ORF2
Protein Length	31
Nucleotide Length	93
Protein Sequence	MSHVPAPHCWDISRFLMGYRYHITTPEGLMI
Nucleotide Sequence	CTGTCACATGTCCCAGCTCCTCACTGCTGGGACATCTCCAGGTTCTTGATGGGATACAGGTACCACATCACTACCCCTGAAGGGTTGATGATC

CircID	chr22:42060197\|42060352
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MGHVTGCGGTTEPRPWSLGMPRASGE
Nucleotide Sequence	CTGGGACATGTGACAGGCTGTGGTGGCACCACTGAGCCTAGACCATGGAGCCTTGGCATGCCCAGGGCAAGTGGGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information