CircRNA Information

General Information
circRNA Basic Information
CircID chr22:42078752|42079016
Strand +
CircType exon
Host Gene ENSG00000177096.7;
Algorism CIRI2;
Sequence GGCTATGAGAGTTCCCAGGTGATTTCTCGAGCAGCTTCAGTTTACCGGAGCCCAGCCAGGAGAGAGAATTTTAGCACAGGAAACGCAATCCCGTGTCCAAGCTCCTAGAATACCCAGGACTGAGAACCAAAGCAACAGACTTTTCCCAGGGAGCCACACTGCCTCCCCACCTCTTCTTTAACCCCTCACTTGGCAGCTCCAGGAGTTGGCTGCTGAAGACAGAGTACAGGAGGGCATTTCGTTGACGTAAAAAAGCTACAAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:42078752|42079016 hsa-miR-22-5p 0 0 1
chr22:42078752|42079016 hsa-miR-22-3p 0 0 1
chr22:42078752|42079016 hsa-miR-34a-5p 0 0 1
chr22:42078752|42079016 hsa-miR-34a-3p 0 0 1
chr22:42078752|42079016 hsa-miR-214-5p 0 0 1
chr22:42078752|42079016 hsa-miR-214-3p 0 0 1
chr22:42078752|42079016 hsa-miR-186-5p 0 0 1
chr22:42078752|42079016 hsa-miR-186-3p 0 0 1
chr22:42078752|42079016 hsa-miR-449a 0 0 1
chr22:42078752|42079016 hsa-miR-539-5p 0 0 1
chr22:42078752|42079016 hsa-miR-539-3p 0 0 1
chr22:42078752|42079016 hsa-miR-558 0 0 1
chr22:42078752|42079016 hsa-miR-598-5p 0 0 1
chr22:42078752|42079016 hsa-miR-598-3p 0 0 1
chr22:42078752|42079016 hsa-miR-602 0 0 1
chr22:42078752|42079016 hsa-miR-630 0 0 1
chr22:42078752|42079016 hsa-miR-650 1 1 1
chr22:42078752|42079016 hsa-miR-449b-5p 0 0 1
chr22:42078752|42079016 hsa-miR-449b-3p 0 0 1
chr22:42078752|42079016 hsa-miR-659-5p 0 0 1
chr22:42078752|42079016 hsa-miR-659-3p 0 0 1
chr22:42078752|42079016 hsa-miR-708-5p 0 0 1
chr22:42078752|42079016 hsa-miR-708-3p 0 0 1
chr22:42078752|42079016 hsa-miR-922 0 0 1
chr22:42078752|42079016 hsa-miR-939-5p 0 0 1
chr22:42078752|42079016 hsa-miR-939-3p 0 0 1
chr22:42078752|42079016 hsa-miR-548g-5p 0 0 1
chr22:42078752|42079016 hsa-miR-548g-3p 0 0 1
chr22:42078752|42079016 hsa-miR-1267 0 0 1
chr22:42078752|42079016 hsa-miR-1292-5p 0 0 1
chr22:42078752|42079016 hsa-miR-1292-3p 0 0 1
chr22:42078752|42079016 hsa-miR-1827 0 0 1
chr22:42078752|42079016 hsa-miR-127-5p 0 0 1
chr22:42078752|42079016 hsa-miR-486-5p 0 0 1
chr22:42078752|42079016 hsa-miR-491-5p 0 0 1
chr22:42078752|42079016 hsa-miR-423-5p 0 0 1
chr22:42078752|42079016 hsa-miR-28-5p 0 0 1
chr22:42078752|42079016 hsa-miR-455-3p 0 0 1
chr22:42078752|42079016 hsa-miR-34c-5p 0 1 1
chr22:42078752|42079016 hsa-miR-9 0 0 1
chr22:42078752|42079016 hsa-miR-644 0 0 1
chr22:42078752|42079016 hsa-miR-365 0 0 1
chr22:42078752|42079016 hsa-miR-638 1 0 0
chr22:42078752|42079016 hsa-miR-644a 0 1 0
chr22:42078752|42079016 hsa-miR-661 1 0 0
chr22:42078752|42079016 hsa-miR-762 1 0 0
chr22:42078752|42079016 hsa-miR-1182 1 0 0
chr22:42078752|42079016 hsa-miR-3154 1 0 0
chr22:42078752|42079016 hsa-miR-3183 1 0 0
chr22:42078752|42079016 hsa-miR-3196 1 0 0
chr22:42078752|42079016 hsa-miR-4302 0 1 0
chr22:42078752|42079016 hsa-miR-4254 0 1 0
chr22:42078752|42079016 hsa-miR-4290 0 1 0
chr22:42078752|42079016 hsa-miR-4505 1 1 0
chr22:42078752|42079016 hsa-miR-1587 1 0 0
chr22:42078752|42079016 hsa-miR-4651 1 0 0
chr22:42078752|42079016 hsa-miR-4674 1 0 0
chr22:42078752|42079016 hsa-miR-4692 0 1 0
chr22:42078752|42079016 hsa-miR-4706 1 0 0
chr22:42078752|42079016 hsa-miR-4710 1 0 0
chr22:42078752|42079016 hsa-miR-5087 1 1 0
chr22:42078752|42079016 hsa-miR-5194 1 1 0
chr22:42078752|42079016 hsa-miR-5787 0 1 0
chr22:42078752|42079016 hsa-miR-6134 0 1 0
chr22:42078752|42079016 hsa-miR-6734-5p 1 1 0
chr22:42078752|42079016 hsa-miR-7851-3p 0 1 0
chr22:42078752|42079016 hsa-miR-3192-5p 0 1 0
chr22:42078752|42079016 hsa-miR-4695-5p 1 0 0
chr22:42078752|42079016 hsa-miR-3064-5p 0 1 0
chr22:42078752|42079016 hsa-miR-6842-3p 0 1 0
chr22:42078752|42079016 hsa-miR-3187-3p 1 0 0
chr22:42078752|42079016 hsa-miR-6845-3p 0 1 0
chr22:42078752|42079016 hsa-miR-6796-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6829-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6782-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6765-3p 1 0 0
chr22:42078752|42079016 hsa-miR-6874-5p 0 1 0
chr22:42078752|42079016 hsa-miR-5006-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6852-5p 1 0 0
chr22:42078752|42079016 hsa-miR-7109-5p 1 0 0
chr22:42078752|42079016 hsa-miR-1226-5p 1 0 0
chr22:42078752|42079016 hsa-miR-4738-3p 0 1 0
chr22:42078752|42079016 hsa-miR-3944-3p 1 0 0
chr22:42078752|42079016 hsa-miR-1229-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6784-5p 1 0 0
chr22:42078752|42079016 hsa-miR-30c-2-3p 0 1 0
chr22:42078752|42079016 hsa-miR-6749-5p 1 0 0
chr22:42078752|42079016 hsa-miR-4667-3p 0 1 0
chr22:42078752|42079016 hsa-miR-6789-5p 1 0 0
chr22:42078752|42079016 hsa-miR-660-3p 0 1 0
chr22:42078752|42079016 hsa-miR-3664-5p 0 1 0
chr22:42078752|42079016 hsa-miR-4763-3p 1 0 0
chr22:42078752|42079016 hsa-miR-6778-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6816-5p 1 0 0
chr22:42078752|42079016 hsa-miR-1343-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6752-5p 1 0 0
chr22:42078752|42079016 hsa-miR-6756-5p 1 0 0
chr22:42078752|42079016 hsa-miR-3620-5p 1 0 0
chr22:42078752|42079016 hsa-miR-4728-5p 1 0 0
chr22:42078752|42079016 hsa-miR-10396b-5p 1 0 0
chr22:42078752|42079016 hsa-miR-328-5p 1 0 0
chr22:42078752|42079016 hsa-miR-449c-5p 0 1 0
chr22:42078752|42079016 hsa-miR-6738-5p 1 1 0
chr22:42078752|42079016 hsa-miR-6858-5p 1 0 0
chr22:42078752|42079016 hsa-miR-34b-5p 0 1 0
chr22:42078752|42079016 hsa-miR-1914-3p 1 0 0
chr22:42078752|42079016 hsa-miR-4646-5p 0 1 0
chr22:42078752|42079016 hsa-miR-6791-5p 1 0 0
chr22:42078752|42079016 hsa-miR-10400-3p 0 1 0
chr22:42078752|42079016 hsa-miR-137-5p 1 1 0
chr22:42078752|42079016 hsa-miR-6833-3p 0 1 0
chr22:42078752|42079016 hsa-miR-6504-5p 0 1 0
chr22:42078752|42079016 hsa-miR-151a-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:42078752|42079016
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MRTKATDFSQGATLPPHLFFNPSLGSSRSWLLKTEYRRAFR
Nucleotide Sequence CTGAGAACCAAAGCAACAGACTTTTCCCAGGGAGCCACACTGCCTCCCCACCTCTTCTTTAACCCCTCACTTGGCAGCTCCAGGAGTTGGCTGCTGAAGACAGAGTACAGGAGGGCATTTCGTTGA
CircID chr22:42078752|42079016
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MYSVFSSQLLELPSEGLKKRWGGSVAPWEKSVALVLSPGYSRSLDTGLRFLC
Nucleotide Sequence CTGTACTCTGTCTTCAGCAGCCAACTCCTGGAGCTGCCAAGTGAGGGGTTAAAGAAGAGGTGGGGAGGCAGTGTGGCTCCCTGGGAAAAGTCTGTTGCTTTGGTTCTCAGTCCTGGGTATTCTAGGAGCTTGGACACGGGATTGCGTTTCCTGTGCTAA
CircID chr22:42078752|42079016
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MLLWFSVLGILGAWTRDCVSCAKILSPGWAPVN
Nucleotide Sequence CTGTTGCTTTGGTTCTCAGTCCTGGGTATTCTAGGAGCTTGGACACGGGATTGCGTTTCCTGTGCTAAAATTCTCTCTCCTGGCTGGGCTCCGGTAAACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab