CircRNA Information

General Information
circRNA Basic Information
CircID chr22:42796765|42796962
Strand -
CircType exon
Host Gene ENSG00000242247.9;
Algorism CIRI2;
Sequence TACCCAATTACAATGACTGTTCTCCCATACACGCAACTATTTTCTGTAGCTGTATCTTCTTACCTCATTCCACTTTAACTCTGTATACCGTATTGATTTGTGATGAGATGATTTATTATGAGAACTCTTAGGGAGTTCTCATCTTCCATTTCTCATCAATTCAAACAGCAACACCTTTCACAAGATAACATTAATTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:42796765|42796962 hsa-let-7b-5p 0 0 1
chr22:42796765|42796962 hsa-let-7b-3p 0 0 1
chr22:42796765|42796962 hsa-let-7c-5p 0 0 1
chr22:42796765|42796962 hsa-let-7c-3p 0 0 1
chr22:42796765|42796962 hsa-let-7d-5p 0 0 1
chr22:42796765|42796962 hsa-let-7d-3p 0 0 1
chr22:42796765|42796962 hsa-let-7e-5p 0 0 1
chr22:42796765|42796962 hsa-let-7e-3p 0 0 1
chr22:42796765|42796962 hsa-miR-17-5p 0 0 1
chr22:42796765|42796962 hsa-miR-17-3p 0 0 1
chr22:42796765|42796962 hsa-miR-20a-5p 0 0 1
chr22:42796765|42796962 hsa-miR-20a-3p 0 0 1
chr22:42796765|42796962 hsa-miR-93-5p 0 0 1
chr22:42796765|42796962 hsa-miR-93-3p 0 0 1
chr22:42796765|42796962 hsa-miR-98-5p 0 0 1
chr22:42796765|42796962 hsa-miR-98-3p 0 0 1
chr22:42796765|42796962 hsa-miR-106a-5p 0 0 1
chr22:42796765|42796962 hsa-miR-106a-3p 0 0 1
chr22:42796765|42796962 hsa-miR-212-5p 0 0 1
chr22:42796765|42796962 hsa-miR-212-3p 0 0 1
chr22:42796765|42796962 hsa-let-7g-5p 0 0 1
chr22:42796765|42796962 hsa-let-7g-3p 0 0 1
chr22:42796765|42796962 hsa-let-7i-5p 0 0 1
chr22:42796765|42796962 hsa-let-7i-3p 0 0 1
chr22:42796765|42796962 hsa-miR-132-5p 0 0 1
chr22:42796765|42796962 hsa-miR-132-3p 0 0 1
chr22:42796765|42796962 hsa-miR-146a-5p 0 0 1
chr22:42796765|42796962 hsa-miR-146a-3p 0 0 1
chr22:42796765|42796962 hsa-miR-206 0 0 1
chr22:42796765|42796962 hsa-miR-106b-5p 0 0 1
chr22:42796765|42796962 hsa-miR-106b-3p 0 0 1
chr22:42796765|42796962 hsa-miR-20b-5p 0 0 1
chr22:42796765|42796962 hsa-miR-20b-3p 0 0 1
chr22:42796765|42796962 hsa-miR-488-5p 0 0 1
chr22:42796765|42796962 hsa-miR-488-3p 0 0 1
chr22:42796765|42796962 hsa-miR-202-5p 0 0 1
chr22:42796765|42796962 hsa-miR-202-3p 0 0 1
chr22:42796765|42796962 hsa-miR-519d-5p 0 0 1
chr22:42796765|42796962 hsa-miR-519d-3p 0 0 1
chr22:42796765|42796962 hsa-miR-539-5p 0 0 1
chr22:42796765|42796962 hsa-miR-539-3p 0 0 1
chr22:42796765|42796962 hsa-miR-581 0 0 1
chr22:42796765|42796962 hsa-miR-589-5p 0 0 1
chr22:42796765|42796962 hsa-miR-589-3p 0 0 1
chr22:42796765|42796962 hsa-miR-613 0 0 1
chr22:42796765|42796962 hsa-miR-616-5p 0 0 1
chr22:42796765|42796962 hsa-miR-616-3p 0 0 1
chr22:42796765|42796962 hsa-miR-1225-5p 0 0 1
chr22:42796765|42796962 hsa-miR-409-3p 0 0 1
chr22:42796765|42796962 hsa-miR-146b-5p 0 0 1
chr22:42796765|42796962 hsa-miR-7 0 0 1
chr22:42796765|42796962 hsa-let-7a 0 0 1
chr22:42796765|42796962 hsa-let-7f 0 0 1
chr22:42796765|42796962 hsa-miR-1 0 0 1
chr22:42796765|42796962 hsa-miR-219-2-3p 0 0 1
chr22:42796765|42796962 hsa-miR-3138 1 0 0
chr22:42796765|42796962 hsa-miR-4719 0 1 0
chr22:42796765|42796962 hsa-miR-6833-5p 1 0 0
chr22:42796765|42796962 hsa-miR-6867-5p 1 0 0
chr22:42796765|42796962 hsa-miR-6730-5p 0 1 0
chr22:42796765|42796962 hsa-miR-7154-3p 1 0 0
chr22:42796765|42796962 hsa-miR-6890-5p 1 0 0
chr22:42796765|42796962 hsa-miR-6871-5p 1 0 0
chr22:42796765|42796962 hsa-miR-3162-5p 1 0 0
chr22:42796765|42796962 hsa-miR-1244 0 1 0
chr22:42796765|42796962 hsa-miR-6778-5p 1 0 0
chr22:42796765|42796962 hsa-miR-10401-5p 1 0 0
chr22:42796765|42796962 hsa-miR-6788-5p 0 1 0
chr22:42796765|42796962 hsa-miR-4769-5p 1 1 0
chr22:42796765|42796962 hsa-miR-6731-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:42796765|42796962
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MRTLREFSSSISHQFKQQHLSQDNINS
Nucleotide Sequence ATGAGAACTCTTAGGGAGTTCTCATCTTCCATTTCTCATCAATTCAAACAGCAACACCTTTCACAAGATAACATTAATTCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab