CircRNA Information

General Information
circRNA Basic Information
CircID chr22:45793545|45807022
Strand +
CircType exon
Host Gene ENSG00000130638.14;
Algorism CIRI2;
Sequence AGGGGTTACTGTCACTGATGTTGCAGTTGTCCAGGATCAACGGGATACCATCCAGCTCATTTACCTGTCCTGCATCACTGGGGAAAGGCAGGAATCGGGGGTGGCAAGAGCTCCTCAGTAGCAGGCAAGAGGGCCTCAGCATGGAGCTGTGTGATTGGTGACTTCTCTTGAGATGCTGTGGCACCTGCATCCTTGGCAAAGGCTGGTGGAACAGACTGTGACTTCTGAAGCAATAGCTGCCTAAAATGAAGGTGCAGGCTCCAGAATTCTAGTCATTTGTCACAGAAAGATTGAAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:45793545|45807022 hsa-miR-27a-5p 0 0 1
chr22:45793545|45807022 hsa-miR-27a-3p 0 0 1
chr22:45793545|45807022 hsa-miR-205-5p 0 0 1
chr22:45793545|45807022 hsa-miR-205-3p 0 0 1
chr22:45793545|45807022 hsa-miR-224-5p 0 0 1
chr22:45793545|45807022 hsa-miR-224-3p 0 0 1
chr22:45793545|45807022 hsa-miR-27b-5p 0 0 1
chr22:45793545|45807022 hsa-miR-27b-3p 0 0 1
chr22:45793545|45807022 hsa-miR-137-5p 0 0 1
chr22:45793545|45807022 hsa-miR-137-3p 0 0 1
chr22:45793545|45807022 hsa-miR-377-5p 0 0 1
chr22:45793545|45807022 hsa-miR-377-3p 0 0 1
chr22:45793545|45807022 hsa-miR-335-5p 0 0 1
chr22:45793545|45807022 hsa-miR-335-3p 0 0 1
chr22:45793545|45807022 hsa-miR-558 0 0 1
chr22:45793545|45807022 hsa-miR-579-5p 0 0 1
chr22:45793545|45807022 hsa-miR-579-3p 0 0 1
chr22:45793545|45807022 hsa-miR-596 0 0 1
chr22:45793545|45807022 hsa-miR-622 0 0 1
chr22:45793545|45807022 hsa-miR-640 0 0 1
chr22:45793545|45807022 hsa-miR-657 0 0 1
chr22:45793545|45807022 hsa-miR-708-5p 0 0 1
chr22:45793545|45807022 hsa-miR-708-3p 0 0 1
chr22:45793545|45807022 hsa-miR-940 0 0 1
chr22:45793545|45807022 hsa-miR-1226-5p 0 0 1
chr22:45793545|45807022 hsa-miR-1226-3p 0 0 1
chr22:45793545|45807022 hsa-miR-1227-5p 0 0 1
chr22:45793545|45807022 hsa-miR-1227-3p 0 0 1
chr22:45793545|45807022 hsa-miR-1286 0 1 1
chr22:45793545|45807022 hsa-miR-1287-5p 0 0 1
chr22:45793545|45807022 hsa-miR-1287-3p 0 0 1
chr22:45793545|45807022 hsa-miR-1299 0 0 1
chr22:45793545|45807022 hsa-miR-513c-5p 0 0 1
chr22:45793545|45807022 hsa-miR-513c-3p 0 0 1
chr22:45793545|45807022 hsa-miR-28-5p 0 0 1
chr22:45793545|45807022 hsa-miR-556-5p 0 0 1
chr22:45793545|45807022 hsa-miR-542-3p 0 0 1
chr22:45793545|45807022 hsa-miR-128 0 0 1
chr22:45793545|45807022 hsa-miR-516b 0 0 1
chr22:45793545|45807022 hsa-miR-549 0 0 1
chr22:45793545|45807022 hsa-miR-1193 1 1 0
chr22:45793545|45807022 hsa-miR-4436a 0 1 0
chr22:45793545|45807022 hsa-miR-3972 1 0 0
chr22:45793545|45807022 hsa-miR-4656 1 0 0
chr22:45793545|45807022 hsa-miR-4705 0 1 0
chr22:45793545|45807022 hsa-miR-5190 1 0 0
chr22:45793545|45807022 hsa-miR-6084 1 0 0
chr22:45793545|45807022 hsa-miR-12122 0 1 0
chr22:45793545|45807022 hsa-miR-510-5p 1 0 0
chr22:45793545|45807022 hsa-miR-6747-3p 0 1 0
chr22:45793545|45807022 hsa-miR-6836-3p 1 0 0
chr22:45793545|45807022 hsa-miR-766-3p 1 0 0
chr22:45793545|45807022 hsa-miR-1225-3p 1 0 0
chr22:45793545|45807022 hsa-miR-7160-5p 1 1 0
chr22:45793545|45807022 hsa-miR-6849-3p 0 1 0
chr22:45793545|45807022 hsa-miR-4728-3p 1 1 0
chr22:45793545|45807022 hsa-miR-5006-5p 0 1 0
chr22:45793545|45807022 hsa-miR-1343-3p 1 0 0
chr22:45793545|45807022 hsa-miR-939-3p 1 0 0
chr22:45793545|45807022 hsa-miR-4763-5p 1 0 0
chr22:45793545|45807022 hsa-miR-4715-3p 0 1 0
chr22:45793545|45807022 hsa-miR-4776-3p 1 1 0
chr22:45793545|45807022 hsa-miR-6814-5p 0 1 0
chr22:45793545|45807022 hsa-miR-1296-5p 1 0 0
chr22:45793545|45807022 hsa-miR-2355-5p 0 1 0
chr22:45793545|45807022 hsa-miR-328-3p 1 0 0
chr22:45793545|45807022 hsa-miR-4649-3p 1 1 0
chr22:45793545|45807022 hsa-miR-6780b-3p 1 0 0
chr22:45793545|45807022 hsa-miR-5089-3p 0 1 0
chr22:45793545|45807022 hsa-miR-1343-5p 1 0 0
chr22:45793545|45807022 hsa-miR-1909-3p 1 0 0
chr22:45793545|45807022 hsa-miR-449c-5p 0 1 0
chr22:45793545|45807022 hsa-miR-1271-3p 1 0 0
chr22:45793545|45807022 hsa-miR-6727-3p 1 0 0
chr22:45793545|45807022 hsa-miR-4769-3p 1 0 0
chr22:45793545|45807022 hsa-miR-2682-5p 0 1 0
chr22:45793545|45807022 hsa-miR-6824-3p 1 0 0
chr22:45793545|45807022 hsa-miR-5699-3p 0 1 0
chr22:45793545|45807022 hsa-miR-514b-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:45793545|45807022
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MHHWGKAGIGGGKSSSVAGKRASAWSCVIGDFS
Nucleotide Sequence CTGCATCACTGGGGAAAGGCAGGAATCGGGGGTGGCAAGAGCTCCTCAGTAGCAGGCAAGAGGGCCTCAGCATGGAGCTGTGTGATTGGTGACTTCTCTTGA
CircID chr22:45793545|45807022
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MVTSLEMLWHLHPWQRLVEQTVTSEAIAA
Nucleotide Sequence TTGGTGACTTCTCTTGAGATGCTGTGGCACCTGCATCCTTGGCAAAGGCTGGTGGAACAGACTGTGACTTCTGAAGCAATAGCTGCCTAA
CircID chr22:45793545|45807022
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MSLMLQLSRINGIPSSSFTCPASLGKGRNRGWQELLSSRQEGLSMELCDW
Nucleotide Sequence CTGTCACTGATGTTGCAGTTGTCCAGGATCAACGGGATACCATCCAGCTCATTTACCTGTCCTGCATCACTGGGGAAAGGCAGGAATCGGGGGTGGCAAGAGCTCCTCAGTAGCAGGCAAGAGGGCCTCAGCATGGAGCTGTGTGATTGGTGA
CircID chr22:45793545|45807022
ORF Type ORF4
Protein Length 71
Nucleotide Length 213
Protein Sequence MFHQPLPRMQVPQHLKRSHQSHSSMLRPSCLLLRSSCHPRFLPFPSDAGQVNELDGIPLILDNCNISDSNP
Nucleotide Sequence CTGTTCCACCAGCCTTTGCCAAGGATGCAGGTGCCACAGCATCTCAAGAGAAGTCACCAATCACACAGCTCCATGCTGAGGCCCTCTTGCCTGCTACTGAGGAGCTCTTGCCACCCCCGATTCCTGCCTTTCCCCAGTGATGCAGGACAGGTAAATGAGCTGGATGGTATCCCGTTGATCCTGGACAACTGCAACATCAGTGACAGTAACCCC
CircID chr22:45793545|45807022
ORF Type ORF5
Protein Length 60
Nucleotide Length 183
Protein Sequence MHLHFRQLLLQKSQSVPPAFAKDAGATASQEKSPITQLHAEALLPATEELLPPPIPAFPQ
Nucleotide Sequence CTGCACCTTCATTTTAGGCAGCTATTGCTTCAGAAGTCACAGTCTGTTCCACCAGCCTTTGCCAAGGATGCAGGTGCCACAGCATCTCAAGAGAAGTCACCAATCACACAGCTCCATGCTGAGGCCCTCTTGCCTGCTACTGAGGAGCTCTTGCCACCCCCGATTCCTGCCTTTCCCCAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab