CircRNA Information

General Information
circRNA Basic Information
CircID chr22:46235219|46235478
Strand -
CircType exon
Host Gene ENSG00000186951.15;
Algorism CIRI2;
Sequence CACCCGGACGATATCTTTCTCTTCCCAAAACTTCTTCAAAAAATGGCAGACCTCCGGCAGCTGGTGACGGAGCATGCGCAGCTGGTGCAGATCATCAAGAAGACGGAGTCGGATGCTGCGCTGCACCCGCTACTGCAGGAGATCTACAGGGACATGTACTGAGTTCCTTCAGATCAGCCACACCTTTTCCAGGAGTTCTGAAGCTGACAGCACTACAAAGGAGACGGGGGAGCAGCACGATTTTGCACAAATATCCACCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:46235219|46235478 hsa-miR-19a-5p 0 0 1
chr22:46235219|46235478 hsa-miR-19a-3p 0 0 1
chr22:46235219|46235478 hsa-miR-22-5p 0 0 1
chr22:46235219|46235478 hsa-miR-22-3p 0 0 1
chr22:46235219|46235478 hsa-miR-107 0 0 1
chr22:46235219|46235478 hsa-miR-346 0 0 1
chr22:46235219|46235478 hsa-miR-520f-5p 0 0 1
chr22:46235219|46235478 hsa-miR-520f-3p 0 0 1
chr22:46235219|46235478 hsa-miR-526b-5p 0 0 1
chr22:46235219|46235478 hsa-miR-526b-3p 0 0 1
chr22:46235219|46235478 hsa-miR-626 0 0 1
chr22:46235219|46235478 hsa-miR-1226-5p 0 0 1
chr22:46235219|46235478 hsa-miR-1226-3p 0 0 1
chr22:46235219|46235478 hsa-miR-1252-5p 0 0 1
chr22:46235219|46235478 hsa-miR-1252-3p 0 0 1
chr22:46235219|46235478 hsa-miR-129-5p 0 0 1
chr22:46235219|46235478 hsa-miR-512-3p 1 1 1
chr22:46235219|46235478 hsa-miR-767-5p 0 0 1
chr22:46235219|46235478 hsa-miR-339-5p 0 0 1
chr22:46235219|46235478 hsa-miR-875-3p 0 1 1
chr22:46235219|46235478 hsa-miR-142-3p 0 0 1
chr22:46235219|46235478 hsa-miR-1274a 0 0 1
chr22:46235219|46235478 hsa-miR-103 0 0 1
chr22:46235219|46235478 hsa-miR-1274b 0 0 1
chr22:46235219|46235478 hsa-miR-644 0 0 1
chr22:46235219|46235478 hsa-miR-19b 0 0 1
chr22:46235219|46235478 hsa-miR-886-3p 0 0 1
chr22:46235219|46235478 hsa-miR-644a 0 1 0
chr22:46235219|46235478 hsa-miR-765 1 0 0
chr22:46235219|46235478 hsa-miR-3132 1 0 0
chr22:46235219|46235478 hsa-miR-3139 0 1 0
chr22:46235219|46235478 hsa-miR-3165 1 0 0
chr22:46235219|46235478 hsa-miR-3652 1 0 0
chr22:46235219|46235478 hsa-miR-3916 0 1 0
chr22:46235219|46235478 hsa-miR-4471 0 1 0
chr22:46235219|46235478 hsa-miR-3689c 1 0 0
chr22:46235219|46235478 hsa-miR-4739 1 0 0
chr22:46235219|46235478 hsa-miR-12119 0 1 0
chr22:46235219|46235478 hsa-miR-12120 0 1 0
chr22:46235219|46235478 hsa-miR-143-5p 0 1 0
chr22:46235219|46235478 hsa-miR-105-3p 1 0 0
chr22:46235219|46235478 hsa-miR-92a-2-5p 1 0 0
chr22:46235219|46235478 hsa-miR-7106-5p 1 0 0
chr22:46235219|46235478 hsa-miR-6833-5p 1 0 0
chr22:46235219|46235478 hsa-miR-4722-5p 1 0 0
chr22:46235219|46235478 hsa-miR-593-5p 0 1 0
chr22:46235219|46235478 hsa-miR-6762-3p 0 1 0
chr22:46235219|46235478 hsa-miR-4474-3p 0 1 0
chr22:46235219|46235478 hsa-miR-197-5p 1 0 0
chr22:46235219|46235478 hsa-miR-6740-5p 1 0 0
chr22:46235219|46235478 hsa-miR-6516-5p 0 1 0
chr22:46235219|46235478 hsa-miR-6501-5p 1 0 0
chr22:46235219|46235478 hsa-miR-2115-3p 0 1 0
chr22:46235219|46235478 hsa-miR-3944-5p 0 1 0
chr22:46235219|46235478 hsa-miR-6510-3p 1 1 0
chr22:46235219|46235478 hsa-miR-4797-3p 0 1 0
chr22:46235219|46235478 hsa-miR-3664-5p 0 1 0
chr22:46235219|46235478 hsa-miR-3689b-3p 1 0 0
chr22:46235219|46235478 hsa-miR-6769b-5p 1 0 0
chr22:46235219|46235478 hsa-miR-1343-5p 1 0 0
chr22:46235219|46235478 hsa-miR-6769a-5p 1 0 0
chr22:46235219|46235478 hsa-miR-7110-5p 1 0 0
chr22:46235219|46235478 hsa-miR-6779-5p 1 0 0
chr22:46235219|46235478 hsa-miR-5196-5p 1 0 0
chr22:46235219|46235478 hsa-miR-3689a-3p 1 1 0
chr22:46235219|46235478 hsa-miR-6731-5p 1 1 0
chr22:46235219|46235478 hsa-miR-4646-5p 1 0 0
chr22:46235219|46235478 hsa-miR-4667-5p 1 0 0
chr22:46235219|46235478 hsa-miR-10392-3p 1 0 0
chr22:46235219|46235478 hsa-miR-6827-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:46235219|46235478
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
Nucleotide Sequence ATGGCAGACCTCCGGCAGCTGGTGACGGAGCATGCGCAGCTGGTGCAGATCATCAAGAAGACGGAGTCGGATGCTGCGCTGCACCCGCTACTGCAGGAGATCTACAGGGACATGTACTGA

CircID chr22:46235219|46235478
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MRSWCRSSRRRSRMLRCTRYCRRSTGTCTEFLQISHTFSRSSEADSTTKETGEQHDFAQIST
Nucleotide Sequence ATGCGCAGCTGGTGCAGATCATCAAGAAGACGGAGTCGGATGCTGCGCTGCACCCGCTACTGCAGGAGATCTACAGGGACATGTACTGAGTTCCTTCAGATCAGCCACACCTTTTCCAGGAGTTCTGAAGCTGACAGCACTACAAAGGAGACGGGGGAGCAGCACGATTTTGCACAAATATCCACC

CircID chr22:46235219|46235478
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MSSFRSATPFPGVLKLTALQRRRGSSTILHKYPP
Nucleotide Sequence CTGAGTTCCTTCAGATCAGCCACACCTTTTCCAGGAGTTCTGAAGCTGACAGCACTACAAAGGAGACGGGGGAGCAGCACGATTTTGCACAAATATCCACCA

CircID chr22:46235219|46235478
ORF Type ORF4
Protein Length 51
Nucleotide Length 156
Protein Sequence MCKIVLLPRLLCSAVSFRTPGKGVADLKELSTCPCRSPAVAGAAQHPTPSS
Nucleotide Sequence TTGTGCAAAATCGTGCTGCTCCCCCGTCTCCTTTGTAGTGCTGTCAGCTTCAGAACTCCTGGAAAAGGTGTGGCTGATCTGAAGGAACTCAGTACATGTCCCTGTAGATCTCCTGCAGTAGCGGGTGCAGCGCAGCATCCGACTCCGTCTTCTTGA

CircID chr22:46235219|46235478
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MHQLRMLRHQLPEVCHFLKKFWEEKDIVRV
Nucleotide Sequence CTGCACCAGCTGCGCATGCTCCGTCACCAGCTGCCGGAGGTCTGCCATTTTTTGAAGAAGTTTTGGGAAGAGAAAGATATCGTCCGGGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites