CircRNA Information

General Information
circRNA Basic Information
CircID chr22:46377097|46377252
Strand -
CircType exon
Host Gene ENSG00000075275.15;
Algorism CIRI2;
Sequence CAGCTGAGAGAGGAAGAGCGCCACGGCGAGGTGCTTGTGAATGCTGTGCAGGTTGGAGCGCAGCATGCGGACCAGGCTCAGGAGGACGAAGGCCACCAGCAGGGCTGCCAGTGACAAGGACACAGCGGCATAGGTGACAATCTTCAGAGGCAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:46377097|46377252
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MREEERHGEVLVNAVQVGAQHADQAQEDEGHQQGCQ
Nucleotide Sequence CTGAGAGAGGAAGAGCGCCACGGCGAGGTGCTTGTGAATGCTGTGCAGGTTGGAGCGCAGCATGCGGACCAGGCTCAGGAGGACGAAGGCCACCAGCAGGGCTGCCAGTGA

CircID chr22:46377097|46377252
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MLCRLERSMRTRLRRTKATSRAASDKDTAA
Nucleotide Sequence ATGCTGTGCAGGTTGGAGCGCAGCATGCGGACCAGGCTCAGGAGGACGAAGGCCACCAGCAGGGCTGCCAGTGACAAGGACACAGCGGCATAG

CircID chr22:46377097|46377252
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MPLKIVTYAAVSLSLAALLVAFVLLSLVRMLRSNLHSIHKHLAVALFLSQL
Nucleotide Sequence CTGCCTCTGAAGATTGTCACCTATGCCGCTGTGTCCTTGTCACTGGCAGCCCTGCTGGTGGCCTTCGTCCTCCTGAGCCTGGTCCGCATGCTGCGCTCCAACCTGCACAGCATTCACAAGCACCTCGCCGTGGCGCTCTTCCTCTCTCAGCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites