CircRNA Information

General Information
circRNA Basic Information
CircID chr22:50276647|50276862
Strand +
CircType exon
Host Gene ENSG00000196576.13;
Algorism CIRI2;
Sequence CTACAAGAAGATGGTGGAGGAGTAAGTCTGCCTGCCCTCCAGGCCAGGCCCCCATGCCCACCCTCGACCCCCTGCGGGGAGGTTCAGGCCTTGGTTTCCCCCACCACCCCCTTTGTGGTCCCTGCCGCCCACACTGTATGATGCTCCCACCCCTGCAGTTACTACAAGGGGATCCGGCAGATGGTGCAGGTCAGCGACCAGGACATGAACACACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:50276647|50276862 hsa-miR-487a-5p 0 0 1
chr22:50276647|50276862 hsa-miR-487a-3p 0 0 1
chr22:50276647|50276862 hsa-miR-578 0 0 1
chr22:50276647|50276862 hsa-miR-608 1 1 1
chr22:50276647|50276862 hsa-miR-625-5p 0 0 1
chr22:50276647|50276862 hsa-miR-625-3p 0 0 1
chr22:50276647|50276862 hsa-miR-631 0 0 1
chr22:50276647|50276862 hsa-miR-643 0 0 1
chr22:50276647|50276862 hsa-miR-802 0 0 1
chr22:50276647|50276862 hsa-miR-541-5p 0 0 1
chr22:50276647|50276862 hsa-miR-541-3p 0 0 1
chr22:50276647|50276862 hsa-miR-920 1 0 1
chr22:50276647|50276862 hsa-miR-1205 0 0 1
chr22:50276647|50276862 hsa-miR-1206 0 0 1
chr22:50276647|50276862 hsa-miR-1293 0 0 1
chr22:50276647|50276862 hsa-miR-1275 0 0 1
chr22:50276647|50276862 hsa-miR-127-3p 0 0 1
chr22:50276647|50276862 hsa-miR-767-5p 0 1 1
chr22:50276647|50276862 hsa-miR-654-5p 1 0 1
chr22:50276647|50276862 hsa-miR-1207-5p 1 1 1
chr22:50276647|50276862 hsa-miR-485-3p 0 0 1
chr22:50276647|50276862 hsa-miR-509-3-5p 0 1 1
chr22:50276647|50276862 hsa-miR-509-5p 0 0 1
chr22:50276647|50276862 hsa-miR-1254 0 0 1
chr22:50276647|50276862 hsa-miR-623 0 1 0
chr22:50276647|50276862 hsa-miR-637 1 0 0
chr22:50276647|50276862 hsa-miR-638 0 1 0
chr22:50276647|50276862 hsa-miR-663a 1 0 0
chr22:50276647|50276862 hsa-miR-762 1 0 0
chr22:50276647|50276862 hsa-miR-1183 1 0 0
chr22:50276647|50276862 hsa-miR-1268a 1 0 0
chr22:50276647|50276862 hsa-miR-2861 1 1 0
chr22:50276647|50276862 hsa-miR-3176 0 1 0
chr22:50276647|50276862 hsa-miR-3196 1 1 0
chr22:50276647|50276862 hsa-miR-4300 1 0 0
chr22:50276647|50276862 hsa-miR-4254 1 0 0
chr22:50276647|50276862 hsa-miR-4270 1 0 0
chr22:50276647|50276862 hsa-miR-3938 0 1 0
chr22:50276647|50276862 hsa-miR-1268b 1 0 0
chr22:50276647|50276862 hsa-miR-4466 1 0 0
chr22:50276647|50276862 hsa-miR-3689c 1 0 0
chr22:50276647|50276862 hsa-miR-4488 1 0 0
chr22:50276647|50276862 hsa-miR-3960 1 0 0
chr22:50276647|50276862 hsa-miR-4648 1 0 0
chr22:50276647|50276862 hsa-miR-4651 1 1 0
chr22:50276647|50276862 hsa-miR-4656 1 0 0
chr22:50276647|50276862 hsa-miR-4686 0 1 0
chr22:50276647|50276862 hsa-miR-4706 1 0 0
chr22:50276647|50276862 hsa-miR-4710 1 0 0
chr22:50276647|50276862 hsa-miR-4734 1 0 0
chr22:50276647|50276862 hsa-miR-6081 1 0 0
chr22:50276647|50276862 hsa-miR-6090 1 0 0
chr22:50276647|50276862 hsa-miR-7704 1 1 0
chr22:50276647|50276862 hsa-miR-8072 1 0 0
chr22:50276647|50276862 hsa-miR-211-3p 1 1 0
chr22:50276647|50276862 hsa-miR-4433b-3p 1 0 0
chr22:50276647|50276862 hsa-miR-6749-3p 1 0 0
chr22:50276647|50276862 hsa-miR-4731-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6747-5p 1 0 0
chr22:50276647|50276862 hsa-miR-4433a-3p 1 0 0
chr22:50276647|50276862 hsa-miR-1227-5p 1 0 0
chr22:50276647|50276862 hsa-miR-3663-3p 1 0 0
chr22:50276647|50276862 hsa-miR-6515-5p 0 1 0
chr22:50276647|50276862 hsa-miR-6757-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6880-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6727-5p 1 0 0
chr22:50276647|50276862 hsa-miR-3622b-5p 0 1 0
chr22:50276647|50276862 hsa-miR-6759-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6721-5p 0 1 0
chr22:50276647|50276862 hsa-miR-197-5p 1 0 0
chr22:50276647|50276862 hsa-miR-4728-3p 1 0 0
chr22:50276647|50276862 hsa-miR-7108-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6716-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6748-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6732-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6827-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6798-5p 1 1 0
chr22:50276647|50276862 hsa-miR-3130-3p 0 1 0
chr22:50276647|50276862 hsa-miR-6782-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6810-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6735-3p 1 0 0
chr22:50276647|50276862 hsa-miR-6786-5p 1 0 0
chr22:50276647|50276862 hsa-miR-1226-5p 1 1 0
chr22:50276647|50276862 hsa-miR-1908-5p 1 0 0
chr22:50276647|50276862 hsa-miR-296-3p 1 0 0
chr22:50276647|50276862 hsa-miR-6749-5p 1 0 0
chr22:50276647|50276862 hsa-miR-3648 1 0 0
chr22:50276647|50276862 hsa-miR-4787-5p 1 1 0
chr22:50276647|50276862 hsa-miR-4446-3p 1 0 0
chr22:50276647|50276862 hsa-miR-149-3p 1 0 0
chr22:50276647|50276862 hsa-miR-6824-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6789-5p 1 0 0
chr22:50276647|50276862 hsa-miR-3162-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6886-5p 0 1 0
chr22:50276647|50276862 hsa-miR-6825-3p 0 1 0
chr22:50276647|50276862 hsa-miR-3922-5p 0 1 0
chr22:50276647|50276862 hsa-miR-499b-5p 0 1 0
chr22:50276647|50276862 hsa-miR-4771 0 1 0
chr22:50276647|50276862 hsa-miR-550b-3p 0 1 0
chr22:50276647|50276862 hsa-miR-1233-5p 1 0 0
chr22:50276647|50276862 hsa-miR-1273h-5p 1 0 0
chr22:50276647|50276862 hsa-miR-3689b-3p 1 0 0
chr22:50276647|50276862 hsa-miR-4763-3p 1 1 0
chr22:50276647|50276862 hsa-miR-6769b-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6778-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6787-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6816-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6870-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6775-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6726-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6737-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6752-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6756-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6769a-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6803-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6819-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6842-5p 1 1 0
chr22:50276647|50276862 hsa-miR-6851-5p 1 0 0
chr22:50276647|50276862 hsa-miR-7107-5p 1 1 0
chr22:50276647|50276862 hsa-miR-7110-5p 1 1 0
chr22:50276647|50276862 hsa-miR-10401-5p 1 1 0
chr22:50276647|50276862 hsa-miR-1249-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6722-3p 1 1 0
chr22:50276647|50276862 hsa-miR-6779-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6808-5p 1 0 0
chr22:50276647|50276862 hsa-miR-7111-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6836-5p 1 0 0
chr22:50276647|50276862 hsa-miR-10526-3p 0 1 0
chr22:50276647|50276862 hsa-miR-1237-5p 1 0 0
chr22:50276647|50276862 hsa-miR-1909-3p 1 1 0
chr22:50276647|50276862 hsa-miR-328-5p 1 0 0
chr22:50276647|50276862 hsa-miR-3689a-3p 1 0 0
chr22:50276647|50276862 hsa-miR-4649-5p 1 0 0
chr22:50276647|50276862 hsa-miR-4749-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6729-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6794-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6846-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6848-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6883-5p 1 0 0
chr22:50276647|50276862 hsa-miR-4436b-3p 0 1 0
chr22:50276647|50276862 hsa-miR-6885-5p 1 0 0
chr22:50276647|50276862 hsa-miR-7843-5p 0 1 0
chr22:50276647|50276862 hsa-miR-6766-5p 1 1 0
chr22:50276647|50276862 hsa-miR-5591-5p 1 0 0
chr22:50276647|50276862 hsa-miR-6791-5p 1 0 0
chr22:50276647|50276862 hsa-miR-135a-2-3p 0 1 0
chr22:50276647|50276862 hsa-miR-4699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:50276647|50276862
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MPALQARPPCPPSTPCGEVQALVSPTTPFVVPAAHTV
Nucleotide Sequence CTGCCTGCCCTCCAGGCCAGGCCCCCATGCCCACCCTCGACCCCCTGCGGGGAGGTTCAGGCCTTGGTTTCCCCCACCACCCCCTTTGTGGTCCCTGCCGCCCACACTGTATGA
CircID chr22:50276647|50276862
ORF Type ORF2
Protein Length 58
Nucleotide Length 177
Protein Sequence MPSRPGPHAHPRPPAGRFRPWFPPPPPLWSLPPTLYDAPTPAVTTRGSGRWCRSATRT
Nucleotide Sequence CTGCCCTCCAGGCCAGGCCCCCATGCCCACCCTCGACCCCCTGCGGGGAGGTTCAGGCCTTGGTTTCCCCCACCACCCCCTTTGTGGTCCCTGCCGCCCACACTGTATGATGCTCCCACCCCTGCAGTTACTACAAGGGGATCCGGCAGATGGTGCAGGTCAGCGACCAGGACATGA
CircID chr22:50276647|50276862
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MPTLDPLRGGSGLGFPHHPLCGPCRPHCMMLPPLQLLQGDPADGAGQRPGHEHT
Nucleotide Sequence ATGCCCACCCTCGACCCCCTGCGGGGAGGTTCAGGCCTTGGTTTCCCCCACCACCCCCTTTGTGGTCCCTGCCGCCCACACTGTATGATGCTCCCACCCCTGCAGTTACTACAAGGGGATCCGGCAGATGGTGCAGGTCAGCGACCAGGACATGAACACACA
CircID chr22:50276647|50276862
ORF Type ORF4
Protein Length 66
Nucleotide Length 201
Protein Sequence MVADLHHLPDPLVVTAGVGASYSVGGRDHKGGGGGNQGLNLPAGGRGWAWGPGLEGRQTYSSTIFL
Nucleotide Sequence CTGGTCGCTGACCTGCACCATCTGCCGGATCCCCTTGTAGTAACTGCAGGGGTGGGAGCATCATACAGTGTGGGCGGCAGGGACCACAAAGGGGGTGGTGGGGGAAACCAAGGCCTGAACCTCCCCGCAGGGGGTCGAGGGTGGGCATGGGGGCCTGGCCTGGAGGGCAGGCAGACTTACTCCTCCACCATCTTCTTGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab