CircRNA Information

General Information
circRNA Basic Information
CircID chr22:50505276|50505461
Strand +
CircType exon
Host Gene ENSG00000100258.16;
Algorism CIRI2;
Sequence TGTGCACTACTTTGGCCTGGAGGTTGACTGGCAGCAGCGCACCATCCACTCCAGAACCAGTGAGTGCCGACCTGGGGGGGCCAGAGGGCAGGGGCGGACCAGTCCTCACACCCCCCTCCTCCACCAGCTTTCACCTTCCACCAGTTTTCTCAGTGGCTGAAGACACTGACGCTGCCCACTGTGTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:50505276|50505461 hsa-miR-122-5p 0 0 1
chr22:50505276|50505461 hsa-miR-122-3p 0 0 1
chr22:50505276|50505461 hsa-miR-130a-5p 0 0 1
chr22:50505276|50505461 hsa-miR-130a-3p 0 0 1
chr22:50505276|50505461 hsa-miR-320a-5p 0 0 1
chr22:50505276|50505461 hsa-miR-320a-3p 0 0 1
chr22:50505276|50505461 hsa-miR-301a-5p 0 0 1
chr22:50505276|50505461 hsa-miR-301a-3p 0 0 1
chr22:50505276|50505461 hsa-miR-130b-5p 0 0 1
chr22:50505276|50505461 hsa-miR-130b-3p 0 0 1
chr22:50505276|50505461 hsa-miR-539-5p 0 0 1
chr22:50505276|50505461 hsa-miR-539-3p 0 0 1
chr22:50505276|50505461 hsa-miR-454-5p 0 0 1
chr22:50505276|50505461 hsa-miR-454-3p 0 0 1
chr22:50505276|50505461 hsa-miR-765 0 0 1
chr22:50505276|50505461 hsa-miR-675-5p 0 0 1
chr22:50505276|50505461 hsa-miR-675-3p 0 0 1
chr22:50505276|50505461 hsa-miR-301b-5p 0 0 1
chr22:50505276|50505461 hsa-miR-301b-3p 0 0 1
chr22:50505276|50505461 hsa-miR-548e-5p 0 0 1
chr22:50505276|50505461 hsa-miR-548e-3p 0 0 1
chr22:50505276|50505461 hsa-miR-1294 0 0 1
chr22:50505276|50505461 hsa-miR-1299 0 0 1
chr22:50505276|50505461 hsa-miR-1224-5p 0 0 1
chr22:50505276|50505461 hsa-miR-885-3p 1 0 1
chr22:50505276|50505461 hsa-miR-361-3p 0 1 1
chr22:50505276|50505461 hsa-miR-320b 0 1 1
chr22:50505276|50505461 hsa-miR-320c 0 1 1
chr22:50505276|50505461 hsa-miR-320d 0 1 1
chr22:50505276|50505461 hsa-miR-582-3p 0 0 1
chr22:50505276|50505461 hsa-miR-548a-3p 0 0 1
chr22:50505276|50505461 hsa-miR-128 0 0 1
chr22:50505276|50505461 hsa-miR-138 0 0 1
chr22:50505276|50505461 hsa-miR-548f 0 0 1
chr22:50505276|50505461 hsa-miR-516b 0 0 1
chr22:50505276|50505461 hsa-miR-608 1 0 0
chr22:50505276|50505461 hsa-miR-658 1 0 0
chr22:50505276|50505461 hsa-miR-1321 1 0 0
chr22:50505276|50505461 hsa-miR-1469 1 0 0
chr22:50505276|50505461 hsa-miR-320e 0 1 0
chr22:50505276|50505461 hsa-miR-4252 0 1 0
chr22:50505276|50505461 hsa-miR-4429 0 1 0
chr22:50505276|50505461 hsa-miR-3689c 1 0 0
chr22:50505276|50505461 hsa-miR-4483 1 0 0
chr22:50505276|50505461 hsa-miR-4496 0 1 0
chr22:50505276|50505461 hsa-miR-2392 1 1 0
chr22:50505276|50505461 hsa-miR-4515 0 1 0
chr22:50505276|50505461 hsa-miR-6133 1 0 0
chr22:50505276|50505461 hsa-miR-6745 1 0 0
chr22:50505276|50505461 hsa-miR-4433b-3p 1 1 0
chr22:50505276|50505461 hsa-miR-18a-3p 0 1 0
chr22:50505276|50505461 hsa-miR-4726-3p 0 1 0
chr22:50505276|50505461 hsa-miR-6825-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6894-5p 1 0 0
chr22:50505276|50505461 hsa-miR-4687-3p 1 0 0
chr22:50505276|50505461 hsa-miR-210-5p 0 1 0
chr22:50505276|50505461 hsa-miR-6799-5p 1 0 0
chr22:50505276|50505461 hsa-miR-8071 1 0 0
chr22:50505276|50505461 hsa-miR-6804-5p 0 1 0
chr22:50505276|50505461 hsa-miR-6833-5p 1 0 0
chr22:50505276|50505461 hsa-miR-3192-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6880-5p 1 1 0
chr22:50505276|50505461 hsa-miR-7847-3p 1 1 0
chr22:50505276|50505461 hsa-miR-8069 1 0 0
chr22:50505276|50505461 hsa-miR-6748-5p 1 0 0
chr22:50505276|50505461 hsa-miR-4697-3p 0 1 0
chr22:50505276|50505461 hsa-miR-6732-5p 1 0 0
chr22:50505276|50505461 hsa-miR-3190-3p 1 1 0
chr22:50505276|50505461 hsa-miR-30b-3p 1 0 0
chr22:50505276|50505461 hsa-miR-4738-3p 1 0 0
chr22:50505276|50505461 hsa-miR-4691-3p 0 1 0
chr22:50505276|50505461 hsa-miR-7156-3p 1 1 0
chr22:50505276|50505461 hsa-miR-194-3p 0 1 0
chr22:50505276|50505461 hsa-miR-3681-5p 0 1 0
chr22:50505276|50505461 hsa-miR-2276-5p 0 1 0
chr22:50505276|50505461 hsa-miR-6752-3p 0 1 0
chr22:50505276|50505461 hsa-miR-744-3p 0 1 0
chr22:50505276|50505461 hsa-miR-1233-5p 1 0 0
chr22:50505276|50505461 hsa-miR-1273h-5p 1 1 0
chr22:50505276|50505461 hsa-miR-3689b-3p 1 0 0
chr22:50505276|50505461 hsa-miR-6769b-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6778-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6787-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6752-5p 0 1 0
chr22:50505276|50505461 hsa-miR-6756-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6803-5p 1 1 0
chr22:50505276|50505461 hsa-miR-7110-5p 0 1 0
chr22:50505276|50505461 hsa-miR-11181-3p 0 1 0
chr22:50505276|50505461 hsa-miR-6779-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6780a-5p 1 1 0
chr22:50505276|50505461 hsa-miR-7111-5p 1 0 0
chr22:50505276|50505461 hsa-miR-328-5p 1 0 0
chr22:50505276|50505461 hsa-miR-3689a-3p 1 0 0
chr22:50505276|50505461 hsa-miR-4632-5p 1 1 0
chr22:50505276|50505461 hsa-miR-6883-5p 1 0 0
chr22:50505276|50505461 hsa-miR-4769-5p 1 0 0
chr22:50505276|50505461 hsa-miR-6753-3p 0 1 0
chr22:50505276|50505461 hsa-miR-6801-3p 0 1 0
chr22:50505276|50505461 hsa-miR-6810-3p 0 1 0
chr22:50505276|50505461 hsa-miR-6775-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:50505276|50505461
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MEVDWQQRTIHSRTSECRPGGARGQGRTSPHTPLLHQLSPSTSFLSG
Nucleotide Sequence CTGGAGGTTGACTGGCAGCAGCGCACCATCCACTCCAGAACCAGTGAGTGCCGACCTGGGGGGGCCAGAGGGCAGGGGCGGACCAGTCCTCACACCCCCCTCCTCCACCAGCTTTCACCTTCCACCAGTTTTCTCAGTGGCTGA
CircID chr22:50505276|50505461
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MAWRLTGSSAPSTPEPVSADLGGPEGRGGPVLTPPSSTSFHLPPVFSVAEDTDAAHCV
Nucleotide Sequence TTGGCCTGGAGGTTGACTGGCAGCAGCGCACCATCCACTCCAGAACCAGTGAGTGCCGACCTGGGGGGGCCAGAGGGCAGGGGCGGACCAGTCCTCACACCCCCCTCCTCCACCAGCTTTCACCTTCCACCAGTTTTCTCAGTGGCTGAAGACACTGACGCTGCCCACTGTGTG
CircID chr22:50505276|50505461
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MVRPCPLAPPGRHSLVLEWMVRCCQSTSRPK
Nucleotide Sequence CTGGTCCGCCCCTGCCCTCTGGCCCCCCCAGGTCGGCACTCACTGGTTCTGGAGTGGATGGTGCGCTGCTGCCAGTCAACCTCCAGGCCAAAGTAG
CircID chr22:50505276|50505461
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MVEEGGVRTGPPLPSGPPRSALTGSGVDGALLPVNLQAKVVH
Nucleotide Sequence CTGGTGGAGGAGGGGGGTGTGAGGACTGGTCCGCCCCTGCCCTCTGGCCCCCCCAGGTCGGCACTCACTGGTTCTGGAGTGGATGGTGCGCTGCTGCCAGTCAACCTCCAGGCCAAAGTAGTGCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab