CircRNA Information

General Information
circRNA Basic Information
CircID chr2:10058454|10058566
Strand -
CircType exon
Host Gene ENSG00000205795.4;
Algorism CIRI2;
Sequence CTTCCGGAAGTGTTGTGGCGCGGATGCCAGGAGGGGCTCGCTTGTGTCACCTAGTCCTCGTGAGCCCTCCCCACTGTGGAGAGCGGGCAACCAAGAGGGGCACGCATTTCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:10058454|10058566 hsa-miR-611 1 0 1
chr2:10058454|10058566 hsa-miR-937-5p 0 0 1
chr2:10058454|10058566 hsa-miR-937-3p 0 0 1
chr2:10058454|10058566 hsa-miR-939-5p 0 0 1
chr2:10058454|10058566 hsa-miR-939-3p 0 0 1
chr2:10058454|10058566 hsa-miR-1225-3p 0 1 1
chr2:10058454|10058566 hsa-miR-491-5p 0 0 1
chr2:10058454|10058566 hsa-miR-128 0 0 1
chr2:10058454|10058566 hsa-miR-203 0 0 1
chr2:10058454|10058566 hsa-miR-636 1 0 0
chr2:10058454|10058566 hsa-miR-638 1 0 0
chr2:10058454|10058566 hsa-miR-3131 1 1 0
chr2:10058454|10058566 hsa-miR-4437 0 1 0
chr2:10058454|10058566 hsa-miR-4706 1 0 0
chr2:10058454|10058566 hsa-miR-4721 0 1 0
chr2:10058454|10058566 hsa-miR-4767 1 0 0
chr2:10058454|10058566 hsa-miR-128-3p 0 1 0
chr2:10058454|10058566 hsa-miR-3150a-3p 0 1 0
chr2:10058454|10058566 hsa-miR-656-5p 1 0 0
chr2:10058454|10058566 hsa-miR-6798-5p 1 0 0
chr2:10058454|10058566 hsa-miR-6774-3p 1 1 0
chr2:10058454|10058566 hsa-miR-5088-5p 0 1 0
chr2:10058454|10058566 hsa-miR-1226-5p 0 1 0
chr2:10058454|10058566 hsa-miR-4783-5p 1 0 0
chr2:10058454|10058566 hsa-miR-4667-3p 0 1 0
chr2:10058454|10058566 hsa-miR-149-3p 0 1 0
chr2:10058454|10058566 hsa-miR-6800-5p 0 1 0
chr2:10058454|10058566 hsa-miR-6769a-3p 1 1 0
chr2:10058454|10058566 hsa-miR-4749-3p 1 1 0
chr2:10058454|10058566 hsa-miR-3126-3p 1 0 0
chr2:10058454|10058566 hsa-miR-6800-3p 1 0 0
chr2:10058454|10058566 hsa-miR-6503-3p 0 1 0
chr2:10058454|10058566 hsa-miR-6763-5p 0 1 0
chr2:10058454|10058566 hsa-miR-3127-3p 1 0 0
chr2:10058454|10058566 hsa-miR-5196-5p 1 0 0
chr2:10058454|10058566 hsa-miR-6794-5p 1 0 0
chr2:10058454|10058566 hsa-miR-10394-3p 1 0 0
chr2:10058454|10058566 hsa-miR-6785-5p 0 1 0
chr2:10058454|10058566 hsa-miR-4731-3p 1 1 0
chr2:10058454|10058566 hsa-miR-6823-3p 0 1 0
chr2:10058454|10058566 hsa-miR-6744-3p 1 0 0
chr2:10058454|10058566 hsa-miR-4720-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:10058454|10058566
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPGGARLCHLVLVSPPHCGERATKRGTHFR
Nucleotide Sequence ATGCCAGGAGGGGCTCGCTTGTGTCACCTAGTCCTCGTGAGCCCTCCCCACTGTGGAGAGCGGGCAACCAAGAGGGGCACGCATTTCAGG

CircID chr2:10058454|10058566
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MPALHSGEGSRGLGDTSEPLLASAPQHFRK
Nucleotide Sequence TTGCCCGCTCTCCACAGTGGGGAGGGCTCACGAGGACTAGGTGACACAAGCGAGCCCCTCCTGGCATCCGCGCCACAACACTTCCGGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites