CircRNA Information

General Information
circRNA Basic Information
CircID chr2:100853692|100853836
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CACTTGGTTTTCAGATCTGCGCCCTCATACCTCCACCCAGCCAACAGATGTGTGCCAGAAGGCTGAACGGCTCCACCTGGCTGCAGATGCCCCTGGGGCTCCCCTTTGTTCTCCTCCACGTGTCCACCGTCTTACCTCACTGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:100853692|100853836 hsa-let-7b-5p 0 0 1
chr2:100853692|100853836 hsa-let-7b-3p 0 0 1
chr2:100853692|100853836 hsa-let-7c-5p 0 0 1
chr2:100853692|100853836 hsa-let-7c-3p 0 0 1
chr2:100853692|100853836 hsa-let-7d-5p 0 0 1
chr2:100853692|100853836 hsa-let-7d-3p 0 0 1
chr2:100853692|100853836 hsa-let-7e-5p 0 0 1
chr2:100853692|100853836 hsa-let-7e-3p 0 0 1
chr2:100853692|100853836 hsa-miR-98-5p 0 0 1
chr2:100853692|100853836 hsa-miR-98-3p 0 0 1
chr2:100853692|100853836 hsa-miR-208a-5p 0 0 1
chr2:100853692|100853836 hsa-miR-208a-3p 0 0 1
chr2:100853692|100853836 hsa-miR-34a-5p 0 0 1
chr2:100853692|100853836 hsa-miR-34a-3p 0 0 1
chr2:100853692|100853836 hsa-let-7g-5p 0 0 1
chr2:100853692|100853836 hsa-let-7g-3p 0 0 1
chr2:100853692|100853836 hsa-let-7i-5p 0 0 1
chr2:100853692|100853836 hsa-let-7i-3p 0 0 1
chr2:100853692|100853836 hsa-miR-449a 0 0 1
chr2:100853692|100853836 hsa-miR-202-5p 0 0 1
chr2:100853692|100853836 hsa-miR-202-3p 0 0 1
chr2:100853692|100853836 hsa-miR-570-5p 0 0 1
chr2:100853692|100853836 hsa-miR-570-3p 0 0 1
chr2:100853692|100853836 hsa-miR-647 0 0 1
chr2:100853692|100853836 hsa-miR-449b-5p 0 0 1
chr2:100853692|100853836 hsa-miR-449b-3p 0 0 1
chr2:100853692|100853836 hsa-miR-765 1 1 1
chr2:100853692|100853836 hsa-miR-208b-5p 0 0 1
chr2:100853692|100853836 hsa-miR-208b-3p 0 0 1
chr2:100853692|100853836 hsa-miR-939-5p 0 0 1
chr2:100853692|100853836 hsa-miR-939-3p 0 0 1
chr2:100853692|100853836 hsa-miR-1237-5p 0 0 1
chr2:100853692|100853836 hsa-miR-1237-3p 0 0 1
chr2:100853692|100853836 hsa-miR-1205 0 0 1
chr2:100853692|100853836 hsa-miR-1293 1 0 1
chr2:100853692|100853836 hsa-miR-1294 0 0 1
chr2:100853692|100853836 hsa-miR-1267 0 0 1
chr2:100853692|100853836 hsa-miR-1225-3p 0 0 1
chr2:100853692|100853836 hsa-miR-1184 0 0 1
chr2:100853692|100853836 hsa-miR-34c-5p 0 1 1
chr2:100853692|100853836 hsa-let-7a 0 0 1
chr2:100853692|100853836 hsa-let-7f 0 0 1
chr2:100853692|100853836 hsa-miR-637 1 0 0
chr2:100853692|100853836 hsa-miR-762 1 0 0
chr2:100853692|100853836 hsa-miR-3132 1 0 0
chr2:100853692|100853836 hsa-miR-3138 1 1 0
chr2:100853692|100853836 hsa-miR-3147 1 0 0
chr2:100853692|100853836 hsa-miR-3154 1 0 0
chr2:100853692|100853836 hsa-miR-3165 1 0 0
chr2:100853692|100853836 hsa-miR-3197 1 0 0
chr2:100853692|100853836 hsa-miR-3652 1 0 0
chr2:100853692|100853836 hsa-miR-4430 1 0 0
chr2:100853692|100853836 hsa-miR-4443 1 0 0
chr2:100853692|100853836 hsa-miR-4458 1 0 0
chr2:100853692|100853836 hsa-miR-4462 1 0 0
chr2:100853692|100853836 hsa-miR-4484 1 0 0
chr2:100853692|100853836 hsa-miR-4492 1 0 0
chr2:100853692|100853836 hsa-miR-4505 1 0 0
chr2:100853692|100853836 hsa-miR-4507 1 0 0
chr2:100853692|100853836 hsa-miR-1587 1 0 0
chr2:100853692|100853836 hsa-miR-4647 1 0 0
chr2:100853692|100853836 hsa-miR-4674 1 0 0
chr2:100853692|100853836 hsa-miR-4688 0 1 0
chr2:100853692|100853836 hsa-miR-4689 1 0 0
chr2:100853692|100853836 hsa-miR-4706 1 0 0
chr2:100853692|100853836 hsa-miR-4710 1 0 0
chr2:100853692|100853836 hsa-miR-4721 1 0 0
chr2:100853692|100853836 hsa-miR-4739 1 0 0
chr2:100853692|100853836 hsa-miR-4767 1 0 0
chr2:100853692|100853836 hsa-miR-5787 1 0 0
chr2:100853692|100853836 hsa-miR-6081 1 0 0
chr2:100853692|100853836 hsa-miR-6090 1 0 0
chr2:100853692|100853836 hsa-miR-6745 1 0 0
chr2:100853692|100853836 hsa-miR-7150 1 0 0
chr2:100853692|100853836 hsa-miR-9500 1 0 0
chr2:100853692|100853836 hsa-miR-11401 1 0 0
chr2:100853692|100853836 hsa-miR-12114 1 1 0
chr2:100853692|100853836 hsa-miR-12115 1 0 0
chr2:100853692|100853836 hsa-miR-12119 1 0 0
chr2:100853692|100853836 hsa-miR-150-3p 1 0 0
chr2:100853692|100853836 hsa-miR-6734-5p 1 0 0
chr2:100853692|100853836 hsa-miR-671-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6861-5p 1 0 0
chr2:100853692|100853836 hsa-miR-7106-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6825-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6894-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4687-3p 1 0 0
chr2:100853692|100853836 hsa-miR-219a-1-3p 1 0 0
chr2:100853692|100853836 hsa-miR-8071 1 1 0
chr2:100853692|100853836 hsa-miR-766-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6804-5p 1 0 0
chr2:100853692|100853836 hsa-miR-7114-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6880-5p 1 1 0
chr2:100853692|100853836 hsa-miR-7847-3p 1 1 0
chr2:100853692|100853836 hsa-miR-6741-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6727-5p 1 0 0
chr2:100853692|100853836 hsa-miR-197-5p 1 0 0
chr2:100853692|100853836 hsa-miR-8069 1 0 0
chr2:100853692|100853836 hsa-miR-5589-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6776-5p 1 1 0
chr2:100853692|100853836 hsa-miR-6742-5p 1 0 0
chr2:100853692|100853836 hsa-miR-3180-3p 1 0 0
chr2:100853692|100853836 hsa-miR-6772-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6796-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6805-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6827-5p 1 1 0
chr2:100853692|100853836 hsa-miR-6881-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6786-5p 1 0 0
chr2:100853692|100853836 hsa-miR-5088-5p 1 0 0
chr2:100853692|100853836 hsa-miR-1226-5p 1 1 0
chr2:100853692|100853836 hsa-miR-6834-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4638-3p 1 0 0
chr2:100853692|100853836 hsa-miR-6824-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6789-5p 1 0 0
chr2:100853692|100853836 hsa-miR-7156-3p 0 1 0
chr2:100853692|100853836 hsa-miR-4715-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4800-5p 1 0 0
chr2:100853692|100853836 hsa-miR-3191-3p 1 0 0
chr2:100853692|100853836 hsa-miR-654-5p 1 0 0
chr2:100853692|100853836 hsa-miR-891a-3p 1 1 0
chr2:100853692|100853836 hsa-miR-483-5p 1 0 0
chr2:100853692|100853836 hsa-miR-1306-3p 1 0 0
chr2:100853692|100853836 hsa-miR-3177-5p 1 0 0
chr2:100853692|100853836 hsa-miR-10400-5p 1 0 0
chr2:100853692|100853836 hsa-miR-1207-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6769b-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6787-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6870-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6775-5p 1 0 0
chr2:100853692|100853836 hsa-miR-1343-5p 1 1 0
chr2:100853692|100853836 hsa-miR-6726-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6743-5p 1 1 0
chr2:100853692|100853836 hsa-miR-6756-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6803-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6819-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6851-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6751-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6779-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6797-5p 1 0 0
chr2:100853692|100853836 hsa-miR-1915-3p 0 1 0
chr2:100853692|100853836 hsa-miR-3620-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4728-5p 1 0 0
chr2:100853692|100853836 hsa-miR-5189-5p 1 0 0
chr2:100853692|100853836 hsa-miR-328-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4701-3p 1 0 0
chr2:100853692|100853836 hsa-miR-6738-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4697-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6885-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6511b-5p 1 0 0
chr2:100853692|100853836 hsa-miR-3940-5p 1 0 0
chr2:100853692|100853836 hsa-miR-4665-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6736-5p 1 0 0
chr2:100853692|100853836 hsa-miR-541-3p 1 0 0
chr2:100853692|100853836 hsa-miR-6750-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6766-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6785-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6849-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6724-5p 1 0 0
chr2:100853692|100853836 hsa-miR-6764-5p 0 1 0
chr2:100853692|100853836 hsa-miR-520d-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:100853692|100853836
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MRPHTSTQPTDVCQKAERLHLAADAPGAPLCSPPRVHRLTSLP
Nucleotide Sequence CTGCGCCCTCATACCTCCACCCAGCCAACAGATGTGTGCCAGAAGGCTGAACGGCTCCACCTGGCTGCAGATGCCCCTGGGGCTCCCCTTTGTTCTCCTCCACGTGTCCACCGTCTTACCTCACTGCCC
CircID chr2:100853692|100853836
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MCARRLNGSTWLQMPLGLPFVLLHVSTVLPHC
Nucleotide Sequence ATGTGTGCCAGAAGGCTGAACGGCTCCACCTGGCTGCAGATGCCCCTGGGGCTCCCCTTTGTTCTCCTCCACGTGTCCACCGTCTTACCTCACTGC
CircID chr2:100853692|100853836
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MQPGGAVQPSGTHLLAGWRYEGADLKTK
Nucleotide Sequence CTGCAGCCAGGTGGAGCCGTTCAGCCTTCTGGCACACATCTGTTGGCTGGGTGGAGGTATGAGGGCGCAGATCTGAAAACCAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab