CircRNA Information

General Information
circRNA Basic Information
CircID chr2:10419896|10420068
Strand -
CircType exon
Host Gene ENSG00000115756.11;
Algorism CIRI2;
Sequence GAGTTCAAGAAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAAGTTCGCCGAGCACGTCTTCCGCACCTTCGACACCAACGGCGACGGCACCATCGACTTCCGGGAGTTCATCATTGCGCTGAGCGTGACCTCGCGGGGCAAGCTGGAGCAGAAGCTCAAGTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:10419896|10420068 hsa-miR-18a-5p 0 0 1
chr2:10419896|10420068 hsa-miR-18a-3p 0 0 1
chr2:10419896|10420068 hsa-miR-18b-5p 0 0 1
chr2:10419896|10420068 hsa-miR-18b-3p 0 0 1
chr2:10419896|10420068 hsa-miR-526b-5p 0 0 1
chr2:10419896|10420068 hsa-miR-526b-3p 0 0 1
chr2:10419896|10420068 hsa-miR-766-5p 0 0 1
chr2:10419896|10420068 hsa-miR-766-3p 0 0 1
chr2:10419896|10420068 hsa-miR-675-5p 0 0 1
chr2:10419896|10420068 hsa-miR-675-3p 0 0 1
chr2:10419896|10420068 hsa-miR-890 0 0 1
chr2:10419896|10420068 hsa-miR-1181 0 1 1
chr2:10419896|10420068 hsa-miR-1272 0 0 1
chr2:10419896|10420068 hsa-miR-1307-5p 0 0 1
chr2:10419896|10420068 hsa-miR-1307-3p 0 0 1
chr2:10419896|10420068 hsa-miR-671-5p 0 0 1
chr2:10419896|10420068 hsa-miR-423-3p 0 0 1
chr2:10419896|10420068 hsa-miR-767-3p 0 0 1
chr2:10419896|10420068 hsa-miR-574-3p 0 0 1
chr2:10419896|10420068 hsa-miR-7 0 0 1
chr2:10419896|10420068 hsa-miR-1275 1 0 0
chr2:10419896|10420068 hsa-miR-3185 0 1 0
chr2:10419896|10420068 hsa-miR-4271 1 1 0
chr2:10419896|10420068 hsa-miR-3916 1 0 0
chr2:10419896|10420068 hsa-miR-4739 1 0 0
chr2:10419896|10420068 hsa-miR-4741 1 0 0
chr2:10419896|10420068 hsa-miR-6125 1 0 0
chr2:10419896|10420068 hsa-miR-7106-5p 1 0 0
chr2:10419896|10420068 hsa-miR-6515-5p 1 0 0
chr2:10419896|10420068 hsa-miR-6746-5p 1 0 0
chr2:10419896|10420068 hsa-miR-8069 1 0 0
chr2:10419896|10420068 hsa-miR-6783-5p 0 1 0
chr2:10419896|10420068 hsa-miR-6850-5p 0 1 0
chr2:10419896|10420068 hsa-miR-6786-5p 1 0 0
chr2:10419896|10420068 hsa-miR-6835-5p 1 0 0
chr2:10419896|10420068 hsa-miR-6824-5p 1 1 0
chr2:10419896|10420068 hsa-miR-6828-3p 0 1 0
chr2:10419896|10420068 hsa-miR-381-5p 0 1 0
chr2:10419896|10420068 hsa-miR-6869-3p 1 0 0
chr2:10419896|10420068 hsa-miR-6870-5p 1 0 0
chr2:10419896|10420068 hsa-miR-6788-5p 1 0 0
chr2:10419896|10420068 hsa-miR-7111-5p 1 0 0
chr2:10419896|10420068 hsa-miR-6780b-5p 1 1 0
chr2:10419896|10420068 hsa-miR-4725-3p 1 1 0
chr2:10419896|10420068 hsa-miR-6794-5p 1 0 0
chr2:10419896|10420068 hsa-miR-4747-5p 1 0 0
chr2:10419896|10420068 hsa-miR-370-5p 0 1 0
chr2:10419896|10420068 hsa-miR-130b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:10419896|10420068
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MSFCSSLPREVTLSAMMNSRKSMVPSPLVSKVRKTCSANLEASP
Nucleotide Sequence TTGAGCTTCTGCTCCAGCTTGCCCCGCGAGGTCACGCTCAGCGCAATGATGAACTCCCGGAAGTCGATGGTGCCGTCGCCGTTGGTGTCGAAGGTGCGGAAGACGTGCTCGGCGAACTTGGAAGCGTCGCCGTAG

CircID chr2:10419896|10420068
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MLQLAPRGHAQRNDELPEVDGAVAVGVEGAEDVLGELGSVAVGEEVGVDLLEL
Nucleotide Sequence CTGCTCCAGCTTGCCCCGCGAGGTCACGCTCAGCGCAATGATGAACTCCCGGAAGTCGATGGTGCCGTCGCCGTTGGTGTCGAAGGTGCGGAAGACGTGCTCGGCGAACTTGGAAGCGTCGCCGTAGGGGAAGAAGTTGGCGTAGATCTTCTTGAACTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites