CircRNA Information

General Information
circRNA Basic Information
CircID chr2:10444589|10444969
Strand -
CircType exon
Host Gene ENSG00000115758.11;
Algorism CIRI2;
Sequence CTCAGATGTTTCTTTAGAATGTCTCCCAGGTCTGCCACATAGAAGGCATCCTTATCATCCTGAAACAAGAGTGGTCACAGGTGACTCACTAGCAGCCTCACCACACACCACACCAATAGCCAGCGACCTTCATTCCCATCAGTCACAATGAATCCTGCTCTTTTGAGTCTAGCCACTGATATGAGTATCACCATTATCACTATTAATTTACCACCAGTGAATTAATTTCTACATTCCATAACAAGACATGTAAGCCTCATTGCTCTTCCTTAGACCTTGCCAAAGTTTTCCACTTGCCTGGCACTCTCAGCTGCACTGCCAGCATGGGCCTCATATACTTACAGAAGAAGAAACTTCATTAATTTTCTGGTCCAGAATGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:10444589|10444969 hsa-miR-31-5p 0 0 1
chr2:10444589|10444969 hsa-miR-31-3p 0 0 1
chr2:10444589|10444969 hsa-miR-96-5p 0 0 1
chr2:10444589|10444969 hsa-miR-96-3p 0 0 1
chr2:10444589|10444969 hsa-miR-148a-5p 0 0 1
chr2:10444589|10444969 hsa-miR-148a-3p 0 0 1
chr2:10444589|10444969 hsa-miR-34a-5p 0 0 1
chr2:10444589|10444969 hsa-miR-34a-3p 0 0 1
chr2:10444589|10444969 hsa-miR-182-5p 0 0 1
chr2:10444589|10444969 hsa-miR-182-3p 0 0 1
chr2:10444589|10444969 hsa-miR-152-5p 0 0 1
chr2:10444589|10444969 hsa-miR-152-3p 0 0 1
chr2:10444589|10444969 hsa-miR-134-5p 0 0 1
chr2:10444589|10444969 hsa-miR-134-3p 0 0 1
chr2:10444589|10444969 hsa-miR-186-5p 0 0 1
chr2:10444589|10444969 hsa-miR-186-3p 0 0 1
chr2:10444589|10444969 hsa-miR-206 0 0 1
chr2:10444589|10444969 hsa-miR-148b-5p 0 0 1
chr2:10444589|10444969 hsa-miR-148b-3p 0 0 1
chr2:10444589|10444969 hsa-miR-422a 0 0 1
chr2:10444589|10444969 hsa-miR-449a 0 1 1
chr2:10444589|10444969 hsa-miR-431-5p 0 0 1
chr2:10444589|10444969 hsa-miR-431-3p 0 0 1
chr2:10444589|10444969 hsa-miR-493-5p 0 0 1
chr2:10444589|10444969 hsa-miR-493-3p 0 0 1
chr2:10444589|10444969 hsa-miR-494-5p 0 0 1
chr2:10444589|10444969 hsa-miR-494-3p 0 0 1
chr2:10444589|10444969 hsa-miR-613 0 0 1
chr2:10444589|10444969 hsa-miR-631 0 0 1
chr2:10444589|10444969 hsa-miR-633 0 0 1
chr2:10444589|10444969 hsa-miR-449b-5p 0 0 1
chr2:10444589|10444969 hsa-miR-449b-3p 0 0 1
chr2:10444589|10444969 hsa-miR-758-5p 0 0 1
chr2:10444589|10444969 hsa-miR-758-3p 0 0 1
chr2:10444589|10444969 hsa-miR-1271-5p 0 0 1
chr2:10444589|10444969 hsa-miR-1271-3p 0 0 1
chr2:10444589|10444969 hsa-miR-1301-5p 0 0 1
chr2:10444589|10444969 hsa-miR-1301-3p 0 0 1
chr2:10444589|10444969 hsa-miR-888-5p 0 0 1
chr2:10444589|10444969 hsa-miR-888-3p 0 0 1
chr2:10444589|10444969 hsa-miR-921 0 0 1
chr2:10444589|10444969 hsa-miR-1299 0 0 1
chr2:10444589|10444969 hsa-miR-1276 0 0 1
chr2:10444589|10444969 hsa-miR-485-5p 0 1 1
chr2:10444589|10444969 hsa-miR-299-3p 0 0 1
chr2:10444589|10444969 hsa-miR-532-5p 0 1 1
chr2:10444589|10444969 hsa-miR-876-3p 0 0 1
chr2:10444589|10444969 hsa-miR-34c-5p 0 1 1
chr2:10444589|10444969 hsa-miR-323-5p 0 0 1
chr2:10444589|10444969 hsa-miR-378 0 0 1
chr2:10444589|10444969 hsa-miR-644 0 0 1
chr2:10444589|10444969 hsa-miR-664 0 0 1
chr2:10444589|10444969 hsa-miR-1 0 0 1
chr2:10444589|10444969 hsa-miR-516b 0 0 1
chr2:10444589|10444969 hsa-miR-147 0 0 1
chr2:10444589|10444969 hsa-miR-1245 0 0 1
chr2:10444589|10444969 hsa-miR-1259 0 0 1
chr2:10444589|10444969 hsa-miR-147a 0 1 0
chr2:10444589|10444969 hsa-miR-608 1 0 0
chr2:10444589|10444969 hsa-miR-639 1 0 0
chr2:10444589|10444969 hsa-miR-1182 1 0 0
chr2:10444589|10444969 hsa-miR-1257 1 0 0
chr2:10444589|10444969 hsa-miR-3131 1 0 0
chr2:10444589|10444969 hsa-miR-3164 1 0 0
chr2:10444589|10444969 hsa-miR-378c 0 1 0
chr2:10444589|10444969 hsa-miR-4316 1 1 0
chr2:10444589|10444969 hsa-miR-3612 0 1 0
chr2:10444589|10444969 hsa-miR-3661 0 1 0
chr2:10444589|10444969 hsa-miR-3668 0 1 0
chr2:10444589|10444969 hsa-miR-3908 0 1 0
chr2:10444589|10444969 hsa-miR-3911 1 0 0
chr2:10444589|10444969 hsa-miR-3929 1 0 0
chr2:10444589|10444969 hsa-miR-4439 0 1 0
chr2:10444589|10444969 hsa-miR-4498 1 0 0
chr2:10444589|10444969 hsa-miR-4502 1 0 0
chr2:10444589|10444969 hsa-miR-4513 1 0 0
chr2:10444589|10444969 hsa-miR-4521 0 1 0
chr2:10444589|10444969 hsa-miR-4525 1 0 0
chr2:10444589|10444969 hsa-miR-4656 1 0 0
chr2:10444589|10444969 hsa-miR-4669 1 0 0
chr2:10444589|10444969 hsa-miR-4673 0 1 0
chr2:10444589|10444969 hsa-miR-4710 0 1 0
chr2:10444589|10444969 hsa-miR-4754 1 0 0
chr2:10444589|10444969 hsa-miR-5047 0 1 0
chr2:10444589|10444969 hsa-miR-5093 1 0 0
chr2:10444589|10444969 hsa-miR-5693 0 1 0
chr2:10444589|10444969 hsa-miR-6077 1 1 0
chr2:10444589|10444969 hsa-miR-6083 0 1 0
chr2:10444589|10444969 hsa-miR-6090 1 0 0
chr2:10444589|10444969 hsa-miR-7150 1 0 0
chr2:10444589|10444969 hsa-miR-8075 1 0 0
chr2:10444589|10444969 hsa-miR-8085 1 0 0
chr2:10444589|10444969 hsa-miR-1843 0 1 0
chr2:10444589|10444969 hsa-miR-12115 1 0 0
chr2:10444589|10444969 hsa-miR-12118 1 0 0
chr2:10444589|10444969 hsa-miR-504-3p 1 0 0
chr2:10444589|10444969 hsa-miR-6747-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6809-5p 0 1 0
chr2:10444589|10444969 hsa-miR-6765-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6857-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4687-3p 1 0 0
chr2:10444589|10444969 hsa-miR-6804-5p 1 1 0
chr2:10444589|10444969 hsa-miR-7851-3p 1 1 0
chr2:10444589|10444969 hsa-miR-5187-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6089 1 0 0
chr2:10444589|10444969 hsa-miR-6867-5p 0 1 0
chr2:10444589|10444969 hsa-miR-3064-5p 1 1 0
chr2:10444589|10444969 hsa-miR-4755-3p 0 1 0
chr2:10444589|10444969 hsa-miR-7160-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6820-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4474-3p 1 0 0
chr2:10444589|10444969 hsa-miR-8069 1 0 0
chr2:10444589|10444969 hsa-miR-6716-5p 1 1 0
chr2:10444589|10444969 hsa-miR-6871-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6796-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6798-5p 1 0 0
chr2:10444589|10444969 hsa-miR-5008-5p 1 1 0
chr2:10444589|10444969 hsa-miR-5006-5p 0 1 0
chr2:10444589|10444969 hsa-miR-149-3p 1 0 0
chr2:10444589|10444969 hsa-miR-6830-5p 1 0 0
chr2:10444589|10444969 hsa-miR-550b-2-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4776-5p 0 1 0
chr2:10444589|10444969 hsa-miR-664b-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4742-5p 0 1 0
chr2:10444589|10444969 hsa-miR-4727-3p 1 0 0
chr2:10444589|10444969 hsa-miR-6868-5p 0 1 0
chr2:10444589|10444969 hsa-miR-6761-5p 0 1 0
chr2:10444589|10444969 hsa-miR-1306-3p 1 0 0
chr2:10444589|10444969 hsa-miR-539-5p 0 1 0
chr2:10444589|10444969 hsa-miR-6808-3p 0 1 0
chr2:10444589|10444969 hsa-miR-1207-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4763-3p 1 0 0
chr2:10444589|10444969 hsa-miR-6769b-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6865-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6893-5p 1 0 0
chr2:10444589|10444969 hsa-miR-5001-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6756-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6769a-5p 1 0 0
chr2:10444589|10444969 hsa-miR-10401-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6780a-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6797-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6879-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4649-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4701-3p 1 0 0
chr2:10444589|10444969 hsa-miR-6729-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6777-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6831-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6511a-5p 0 1 0
chr2:10444589|10444969 hsa-miR-6731-5p 1 0 0
chr2:10444589|10444969 hsa-miR-4700-5p 1 0 0
chr2:10444589|10444969 hsa-miR-6891-5p 1 1 0
chr2:10444589|10444969 hsa-miR-550a-3-5p 1 0 0
chr2:10444589|10444969 hsa-miR-550a-5p 1 0 0
chr2:10444589|10444969 hsa-miR-9851-5p 1 1 0
chr2:10444589|10444969 hsa-miR-3059-3p 1 0 0
chr2:10444589|10444969 hsa-miR-3136-5p 0 1 0
chr2:10444589|10444969 hsa-miR-4645-5p 0 1 0
chr2:10444589|10444969 hsa-miR-371b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:10444589|10444969
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MNPALLSLATDMSITIITINLPPVN
Nucleotide Sequence ATGAATCCTGCTCTTTTGAGTCTAGCCACTGATATGAGTATCACCATTATCACTATTAATTTACCACCAGTGAATTAA
CircID chr2:10444589|10444969
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MPKFSTCLALSAALPAWASYTYRRRNFINFLVQNV
Nucleotide Sequence TTGCCAAAGTTTTCCACTTGCCTGGCACTCTCAGCTGCACTGCCAGCATGGGCCTCATATACTTACAGAAGAAGAAACTTCATTAATTTTCTGGTCCAGAATGTC
CircID chr2:10444589|10444969
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MPHRRHPYHPETRVVTGDSLAASPHTTPIASDLHSHQSQ
Nucleotide Sequence CTGCCACATAGAAGGCATCCTTATCATCCTGAAACAAGAGTGGTCACAGGTGACTCACTAGCAGCCTCACCACACACCACACCAATAGCCAGCGACCTTCATTCCCATCAGTCACAATGA
CircID chr2:10444589|10444969
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MLFLRPCQSFPLAWHSQLHCQHGPHILTEEETSLIFWSRM
Nucleotide Sequence TTGCTCTTCCTTAGACCTTGCCAAAGTTTTCCACTTGCCTGGCACTCTCAGCTGCACTGCCAGCATGGGCCTCATATACTTACAGAAGAAGAAACTTCATTAATTTTCTGGTCCAGAATG
CircID chr2:10444589|10444969
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MVILISVARLKRAGFIVTDGNEGRWLLVWCVVRLLVSHL
Nucleotide Sequence ATGGTGATACTCATATCAGTGGCTAGACTCAAAAGAGCAGGATTCATTGTGACTGATGGGAATGAAGGTCGCTGGCTATTGGTGTGGTGTGTGGTGAGGCTGCTAGTGAGTCACCTGTGA
CircID chr2:10444589|10444969
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MRPMLAVQLRVPGKWKTLARSKEEQ
Nucleotide Sequence ATGAGGCCCATGCTGGCAGTGCAGCTGAGAGTGCCAGGCAAGTGGAAAACTTTGGCAAGGTCTAAGGAAGAGCAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab