CircRNA Information

General Information
circRNA Basic Information
CircID chr2:112215936|112216144
Strand -
CircType exon
Host Gene ENSG00000144161.11;
Algorism CIRI2;
Sequence AATAGGAAACTGGTTTAAAAAAATCATAGAACCATAATTTATTTTAAGCCCTAAAATGAAATTGTGAACCATTAAAAATATGTTGTAAAACTATTTAATGTCATAAAGAGAACTAACTCTGTTTTTATGGTCCATCTACCAATGTCTTCCGAGCAGTTCTCTCTCCTCAAACCTCCTCTACCTCTTTACTCACCCTCACTCAGCCTAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:112215936|112216144 hsa-let-7b-5p 0 0 1
chr2:112215936|112216144 hsa-let-7b-3p 0 0 1
chr2:112215936|112216144 hsa-let-7c-5p 0 0 1
chr2:112215936|112216144 hsa-let-7c-3p 0 0 1
chr2:112215936|112216144 hsa-let-7d-5p 0 0 1
chr2:112215936|112216144 hsa-let-7d-3p 0 0 1
chr2:112215936|112216144 hsa-let-7e-5p 0 0 1
chr2:112215936|112216144 hsa-let-7e-3p 0 0 1
chr2:112215936|112216144 hsa-miR-98-5p 0 0 1
chr2:112215936|112216144 hsa-miR-98-3p 0 0 1
chr2:112215936|112216144 hsa-let-7g-5p 0 0 1
chr2:112215936|112216144 hsa-let-7g-3p 0 0 1
chr2:112215936|112216144 hsa-let-7i-5p 0 0 1
chr2:112215936|112216144 hsa-let-7i-3p 0 0 1
chr2:112215936|112216144 hsa-miR-146a-5p 0 0 1
chr2:112215936|112216144 hsa-miR-146a-3p 0 0 1
chr2:112215936|112216144 hsa-miR-185-5p 0 0 1
chr2:112215936|112216144 hsa-miR-185-3p 0 0 1
chr2:112215936|112216144 hsa-miR-379-5p 0 0 1
chr2:112215936|112216144 hsa-miR-379-3p 0 0 1
chr2:112215936|112216144 hsa-miR-384 0 0 1
chr2:112215936|112216144 hsa-miR-425-5p 0 0 1
chr2:112215936|112216144 hsa-miR-425-3p 0 0 1
chr2:112215936|112216144 hsa-miR-579-5p 0 0 1
chr2:112215936|112216144 hsa-miR-579-3p 0 0 1
chr2:112215936|112216144 hsa-miR-583 0 0 1
chr2:112215936|112216144 hsa-miR-584-5p 0 0 1
chr2:112215936|112216144 hsa-miR-584-3p 0 0 1
chr2:112215936|112216144 hsa-miR-641 0 1 1
chr2:112215936|112216144 hsa-miR-1296-5p 0 0 1
chr2:112215936|112216144 hsa-miR-1296-3p 0 0 1
chr2:112215936|112216144 hsa-miR-877-5p 0 0 1
chr2:112215936|112216144 hsa-miR-877-3p 0 0 1
chr2:112215936|112216144 hsa-miR-1304-5p 0 0 1
chr2:112215936|112216144 hsa-miR-1304-3p 0 0 1
chr2:112215936|112216144 hsa-miR-1276 0 0 1
chr2:112215936|112216144 hsa-miR-513b-5p 0 0 1
chr2:112215936|112216144 hsa-miR-513b-3p 0 0 1
chr2:112215936|112216144 hsa-miR-423-3p 0 0 1
chr2:112215936|112216144 hsa-miR-1224-5p 1 0 1
chr2:112215936|112216144 hsa-miR-337-3p 0 0 1
chr2:112215936|112216144 hsa-miR-146b-5p 0 0 1
chr2:112215936|112216144 hsa-miR-548d-3p 0 0 1
chr2:112215936|112216144 hsa-miR-7 0 0 1
chr2:112215936|112216144 hsa-let-7a 0 0 1
chr2:112215936|112216144 hsa-let-7f 0 0 1
chr2:112215936|112216144 hsa-miR-768-3p 0 0 1
chr2:112215936|112216144 hsa-miR-184 1 0 0
chr2:112215936|112216144 hsa-miR-921 1 0 0
chr2:112215936|112216144 hsa-miR-3125 1 0 0
chr2:112215936|112216144 hsa-miR-3131 1 0 0
chr2:112215936|112216144 hsa-miR-3132 1 0 0
chr2:112215936|112216144 hsa-miR-3141 1 0 0
chr2:112215936|112216144 hsa-miR-3147 0 1 0
chr2:112215936|112216144 hsa-miR-3174 0 1 0
chr2:112215936|112216144 hsa-miR-3175 1 0 0
chr2:112215936|112216144 hsa-miR-3929 1 1 0
chr2:112215936|112216144 hsa-miR-4458 0 1 0
chr2:112215936|112216144 hsa-miR-4478 1 1 0
chr2:112215936|112216144 hsa-miR-4481 1 0 0
chr2:112215936|112216144 hsa-miR-4499 1 0 0
chr2:112215936|112216144 hsa-miR-4505 1 0 0
chr2:112215936|112216144 hsa-miR-2392 1 0 0
chr2:112215936|112216144 hsa-miR-4533 1 0 0
chr2:112215936|112216144 hsa-miR-1587 1 0 0
chr2:112215936|112216144 hsa-miR-4644 1 1 0
chr2:112215936|112216144 hsa-miR-4656 1 0 0
chr2:112215936|112216144 hsa-miR-4658 1 0 0
chr2:112215936|112216144 hsa-miR-4689 1 0 0
chr2:112215936|112216144 hsa-miR-4710 1 0 0
chr2:112215936|112216144 hsa-miR-4748 1 1 0
chr2:112215936|112216144 hsa-miR-4784 1 0 0
chr2:112215936|112216144 hsa-miR-5572 1 0 0
chr2:112215936|112216144 hsa-miR-5739 1 0 0
chr2:112215936|112216144 hsa-miR-5787 1 0 0
chr2:112215936|112216144 hsa-miR-6133 1 0 0
chr2:112215936|112216144 hsa-miR-6863 1 0 0
chr2:112215936|112216144 hsa-miR-8077 1 1 0
chr2:112215936|112216144 hsa-miR-8085 1 1 0
chr2:112215936|112216144 hsa-miR-12114 1 0 0
chr2:112215936|112216144 hsa-miR-12118 1 0 0
chr2:112215936|112216144 hsa-miR-6734-5p 1 1 0
chr2:112215936|112216144 hsa-miR-6747-5p 1 0 0
chr2:112215936|112216144 hsa-miR-7106-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6825-5p 1 0 0
chr2:112215936|112216144 hsa-miR-27a-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6804-5p 1 1 0
chr2:112215936|112216144 hsa-miR-1236-5p 1 0 0
chr2:112215936|112216144 hsa-miR-5187-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6880-5p 1 0 0
chr2:112215936|112216144 hsa-miR-7847-3p 1 0 0
chr2:112215936|112216144 hsa-miR-6746-5p 1 0 0
chr2:112215936|112216144 hsa-miR-4709-3p 1 0 0
chr2:112215936|112216144 hsa-miR-7160-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6890-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6759-5p 1 0 0
chr2:112215936|112216144 hsa-miR-197-5p 1 0 0
chr2:112215936|112216144 hsa-miR-5589-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6776-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6732-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6881-5p 1 0 0
chr2:112215936|112216144 hsa-miR-1226-5p 1 0 0
chr2:112215936|112216144 hsa-miR-193b-5p 1 0 0
chr2:112215936|112216144 hsa-miR-296-3p 1 0 0
chr2:112215936|112216144 hsa-miR-4787-5p 1 0 0
chr2:112215936|112216144 hsa-miR-937-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6824-5p 1 1 0
chr2:112215936|112216144 hsa-miR-3925-5p 0 1 0
chr2:112215936|112216144 hsa-miR-4776-5p 0 1 0
chr2:112215936|112216144 hsa-miR-664b-5p 1 0 0
chr2:112215936|112216144 hsa-let-7a-5p 0 1 0
chr2:112215936|112216144 hsa-miR-6832-5p 1 0 0
chr2:112215936|112216144 hsa-miR-4763-3p 1 0 0
chr2:112215936|112216144 hsa-miR-6769b-5p 1 1 0
chr2:112215936|112216144 hsa-miR-6812-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6870-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6752-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6756-5p 1 1 0
chr2:112215936|112216144 hsa-miR-6769a-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6803-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6851-5p 1 0 0
chr2:112215936|112216144 hsa-miR-7110-5p 1 1 0
chr2:112215936|112216144 hsa-miR-11181-3p 1 0 0
chr2:112215936|112216144 hsa-miR-1249-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6751-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6797-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6808-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6879-5p 1 0 0
chr2:112215936|112216144 hsa-miR-3620-5p 1 0 0
chr2:112215936|112216144 hsa-miR-10526-3p 1 0 0
chr2:112215936|112216144 hsa-miR-4649-5p 1 0 0
chr2:112215936|112216144 hsa-miR-4701-3p 1 0 0
chr2:112215936|112216144 hsa-miR-4745-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6729-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6858-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6883-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6831-5p 1 1 0
chr2:112215936|112216144 hsa-miR-4758-5p 1 0 0
chr2:112215936|112216144 hsa-miR-30c-1-3p 1 0 0
chr2:112215936|112216144 hsa-miR-6758-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6856-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6736-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6855-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6891-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6790-5p 1 0 0
chr2:112215936|112216144 hsa-miR-6884-5p 1 0 0
chr2:112215936|112216144 hsa-miR-3136-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:112215936|112216144
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MVHLPMSSEQFSLLKPPLPLYSPSLSL
Nucleotide Sequence ATGGTCCATCTACCAATGTCTTCCGAGCAGTTCTCTCTCCTCAAACCTCCTCTACCTCTTTACTCACCCTCACTCAGCCTA
CircID chr2:112215936|112216144
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MFLWSIYQCLPSSSLSSNLLYLFTHPHSA
Nucleotide Sequence CTGTTTTTATGGTCCATCTACCAATGTCTTCCGAGCAGTTCTCTCTCCTCAAACCTCCTCTACCTCTTTACTCACCCTCACTCAGCCTAA
CircID chr2:112215936|112216144
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MRRENCSEDIGRWTIKTELVLFMTLNSFTTYF
Nucleotide Sequence TTGAGGAGAGAGAACTGCTCGGAAGACATTGGTAGATGGACCATAAAAACAGAGTTAGTTCTCTTTATGACATTAAATAGTTTTACAACATATTTTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab